Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AL355143.1-201ENST00000407101 841 ntBASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 RNU2-23P-201ENST00000410545 195 ntBASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 CDK8P2-201ENST00000415020 547 ntBASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 MCFD2P1-201ENST00000417812 300 ntBASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 AL512637.2-201ENST00000431287 1256 ntBASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 OR6C5P-201ENST00000452388 923 ntBASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 AL117336.2-201ENST00000602435 335 ntBASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 SNORD31B-201ENST00000364977 69 ntBASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 MTND3P20-201ENST00000407663 186 ntBASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 RNU6-613P-201ENST00000410412 108 ntBASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 RNU7-102P-201ENST00000458948 62 ntBASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 MIR4676-201ENST00000583078 72 ntBASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 AL671309.1-201ENST00000603750 544 ntBASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 AL159972.1-201ENST00000625150 448 ntBASIC-1.03□□□□□ -2.57
CHD7Q9P2D1 RNU6-396P-201ENST00000365369 105 ntBASIC-1.04□□□□□ -2.58
CHD7Q9P2D1 RNU6-98P-201ENST00000384173 107 ntBASIC-1.04□□□□□ -2.58
CHD7Q9P2D1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-1.04□□□□□ -2.58
CHD7Q9P2D1 AL158053.1-201ENST00000441503 453 ntBASIC-1.04□□□□□ -2.58
CHD7Q9P2D1 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.04□□□□□ -2.58
CHD7Q9P2D1 RNU6-410P-201ENST00000517006 107 ntBASIC-1.04□□□□□ -2.58
CHD7Q9P2D1 AC008521.1-201ENST00000587471 187 ntBASIC-1.04□□□□□ -2.58
CHD7Q9P2D1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-1.04□□□□□ -2.58
CHD7Q9P2D1 CDR1-202ENST00000625883 1485 ntBASIC-1.04□□□□□ -2.58
CHD7Q9P2D1 RNU6-194P-201ENST00000363862 105 ntBASIC-1.04□□□□□ -2.58
CHD7Q9P2D1 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.04□□□□□ -2.58
CHD7Q9P2D1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-1.04□□□□□ -2.58
CHD7Q9P2D1 AC023512.1-201ENST00000444513 499 ntBASIC-1.04□□□□□ -2.58
CHD7Q9P2D1 AC010655.3-201ENST00000478818 450 ntBASIC-1.04□□□□□ -2.58
CHD7Q9P2D1 AC108019.1-201ENST00000512540 175 ntBASIC-1.04□□□□□ -2.58
CHD7Q9P2D1 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.04□□□□□ -2.58
CHD7Q9P2D1 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.04□□□□□ -2.58
CHD7Q9P2D1 RNU6-1010P-201ENST00000362757 107 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 snoU2-30.2-201ENST00000362805 70 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 USMG5P1-201ENST00000425964 177 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 RNU6-803P-201ENST00000516034 102 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 SNORD45.4-201ENST00000516629 73 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 AL606834.3-201ENST00000602615 496 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 AC144521.1-201ENST00000607148 956 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 RNU4-21P-201ENST00000362802 126 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 SNORA2.1-201ENST00000363089 137 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 RNA5SP86-201ENST00000390869 98 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 U8.16-201ENST00000391279 133 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 MIR1302-7-201ENST00000408841 72 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 MTCO1P17-201ENST00000411522 491 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 MTATP6P27-201ENST00000416987 621 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 RNU7-94P-201ENST00000459576 63 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 SNORD92-201ENST00000585078 85 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 AC012433.1-201ENST00000588916 398 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 SNORA22B-201ENST00000383876 138 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 MTCO3P41-201ENST00000414801 328 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 HGF-207ENST00000453018 721 ntTSL 3 BASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 RNU2-53P-201ENST00000516257 147 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 AC099654.8-201ENST00000637757 681 ntBASIC-1.05□□□□□ -2.58
CHD7Q9P2D1 AC010332.2-201ENST00000613083 1904 ntBASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 MIR520C-201ENST00000385005 87 ntBASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 snoU13.14-201ENST00000459372 104 ntBASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 RNU6-1041P-201ENST00000516254 102 ntBASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 AL359075.3-201ENST00000613288 217 ntBASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 AC104260.1-201ENST00000616660 539 ntBASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 RNU6-934P-201ENST00000365154 107 ntBASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 Y_RNA.336-201ENST00000365307 109 ntBASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 snoU13.16-201ENST00000459350 104 ntBASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 AC010531.2-201ENST00000465012 153 ntBASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 BNIP3P24-201ENST00000593398 557 ntBASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 AL118556.2-201ENST00000614375 824 ntBASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 AL359547.2-201ENST00000615810 418 ntBASIC-1.06□□□□□ -2.58
CHD7Q9P2D1 RNU6-1210P-201ENST00000363775 107 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 AC010468.3-201ENST00000508225 458 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 AC010486.3-201ENST00000511602 785 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 AC093519.1-201ENST00000566109 298 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 AC008608.1-201ENST00000603910 127 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 MIR6854-201ENST00000614935 69 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 AC073869.9-201ENST00000641610 120 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 SNORD114-17-201ENST00000364699 75 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 MIR125B2-201ENST00000385128 89 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms