Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC243428.1-201ENST00000421099 264 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 USP9YP30-201ENST00000430729 455 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 AC005002.2-201ENST00000438228 269 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1□□□□□ -2.25
KLHL28Q9NXS3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1□□□□□ -2.25
KLHL28Q9NXS3 UBL5P1-201ENST00000507979 193 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 AC011352.1-201ENST00000512300 793 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 RNU4-49P-201ENST00000516080 140 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 SNORA25.14-201ENST00000516481 132 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 RNU6-566P-201ENST00000516790 107 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1□□□□□ -2.25
KLHL28Q9NXS3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1□□□□□ -2.25
KLHL28Q9NXS3 AL022345.2-201ENST00000606307 135 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 AC009248.2-201ENST00000619826 254 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 MIR8054-201ENST00000620877 86 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.157-201ENST00000363638 102 ntBASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.796-201ENST00000364268 102 ntBASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.799-201ENST00000364992 102 ntBASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.415-201ENST00000384012 112 ntBASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 RNU6-17P-201ENST00000384245 107 ntBASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 RNU6-842P-201ENST00000384269 107 ntBASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 RNY1P14-201ENST00000384426 108 ntBASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 RNU6-18P-201ENST00000384527 107 ntBASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 MIR222-201ENST00000384992 110 ntBASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 MTND1P17-201ENST00000448961 204 ntBASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 AC103851.1-201ENST00000506833 274 ntBASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 RNU7-128P-201ENST00000517247 62 ntBASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 CYCSP23-201ENST00000519781 313 ntBASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 AC011604.1-201ENST00000545978 196 ntBASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 AC136932.1-201ENST00000574771 208 ntBASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 MIR6128-201ENST00000615528 109 ntBASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 MIR6734-201ENST00000621166 68 ntBASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KLHL28Q9NXS3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 SNORA22C-201ENST00000384614 134 ntBASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.573-201ENST00000384763 105 ntBASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 MIR153-2-201ENST00000385225 87 ntBASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 MIR1185-2-201ENST00000408687 86 ntBASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 AC009161.1-201ENST00000417306 376 ntBASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 AC245047.3-201ENST00000429428 127 ntBASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 NDUFB4P10-201ENST00000452541 359 ntBASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 snoU13.18-201ENST00000459483 104 ntBASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 AC091179.3-201ENST00000474761 144 ntBASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 AC069439.1-201ENST00000494739 167 ntBASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 RNU6-1198P-201ENST00000516904 67 ntBASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 AC004584.2-201ENST00000570407 410 ntBASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 AC073869.6-201ENST00000640656 341 ntBASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.86-201ENST00000363020 111 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 RNU1-93P-201ENST00000364704 169 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.405-201ENST00000383979 100 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 RNU6-42P-201ENST00000384165 107 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.451-201ENST00000384200 100 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.524-201ENST00000384564 100 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.561-201ENST00000384694 100 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 RNU6-541P-201ENST00000384709 110 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 MIR520E-201ENST00000384867 87 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 MIR489-201ENST00000384923 84 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 RNU6-440P-201ENST00000390882 105 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 RNU6-159P-201ENST00000391080 106 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 MRPL42P3-201ENST00000401492 326 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 RNA5SP118-201ENST00000410385 109 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 MTND4LP16-201ENST00000440828 295 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 AP000870.1-201ENST00000472927 406 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 RNA5SP220-201ENST00000516298 104 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.682-201ENST00000516457 100 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 AL137100.2-201ENST00000555786 315 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 FRG2DP-202ENST00000566967 323 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 MIR5695-201ENST00000579717 85 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 MIR4273-201ENST00000582824 84 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 AC022432.1-201ENST00000595739 310 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 AC007014.2-201ENST00000615581 479 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 U6.73-201ENST00000619194 103 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 AL513423.1-201ENST00000621695 132 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 AL391516.1-201ENST00000554380 2449 ntBASIC0.97□□□□□ -2.25
KLHL28Q9NXS3 RNU6-222P-201ENST00000362438 107 ntBASIC0.96□□□□□ -2.26
KLHL28Q9NXS3 U3.8-201ENST00000363675 217 ntBASIC0.96□□□□□ -2.26
KLHL28Q9NXS3 RNU6-595P-201ENST00000363944 107 ntBASIC0.96□□□□□ -2.26
KLHL28Q9NXS3 RNU6-596P-201ENST00000365395 98 ntBASIC0.96□□□□□ -2.26
KLHL28Q9NXS3 RNU6-1080P-201ENST00000383982 107 ntBASIC0.96□□□□□ -2.26
KLHL28Q9NXS3 MIR10B-201ENST00000385011 110 ntBASIC0.96□□□□□ -2.26
KLHL28Q9NXS3 RNU6-1186P-201ENST00000410429 97 ntBASIC0.96□□□□□ -2.26
KLHL28Q9NXS3 RAB28P5-201ENST00000427490 651 ntBASIC0.96□□□□□ -2.26
KLHL28Q9NXS3 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.96□□□□□ -2.26
KLHL28Q9NXS3 RNU6-329P-201ENST00000459618 107 ntBASIC0.96□□□□□ -2.26
KLHL28Q9NXS3 RPS29P1-201ENST00000465274 159 ntBASIC0.96□□□□□ -2.26
KLHL28Q9NXS3 AC092991.1-201ENST00000477176 376 ntBASIC0.96□□□□□ -2.26
KLHL28Q9NXS3 MTND5P5-201ENST00000503764 376 ntBASIC0.96□□□□□ -2.26
KLHL28Q9NXS3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.96□□□□□ -2.26
KLHL28Q9NXS3 CBX3P8-201ENST00000532412 525 ntBASIC0.96□□□□□ -2.26
KLHL28Q9NXS3 MIR4790-201ENST00000577799 79 ntBASIC0.96□□□□□ -2.26
KLHL28Q9NXS3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 196.1 ms