Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 snoU2_19.1-201ENST00000362361 80 ntBASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 SNORA1-201ENST00000384107 130 ntBASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 RNU6-975P-201ENST00000384296 105 ntBASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 RNU6-813P-201ENST00000384691 107 ntBASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 MIR759-201ENST00000390224 91 ntBASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 AC093578.1-201ENST00000415219 368 ntBASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 AL513477.1-202ENST00000417061 214 ntBASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 AC083863.1-201ENST00000438811 231 ntBASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 AC107297.1-201ENST00000459991 176 ntBASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 AC080013.2-201ENST00000460866 323 ntBASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 AC011406.1-201ENST00000512440 370 ntBASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 MIR3199-1-201ENST00000582434 88 ntBASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.8□□□□□ -1.8
CUEDC1Q9NWM3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CUEDC1Q9NWM3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CUEDC1Q9NWM3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CUEDC1Q9NWM3 MIR494-201ENST00000349529 81 ntBASIC3.79□□□□□ -1.8
CUEDC1Q9NWM3 MIR423-201ENST00000362201 94 ntBASIC3.79□□□□□ -1.8
CUEDC1Q9NWM3 RNA5SP72-201ENST00000364442 117 ntBASIC3.79□□□□□ -1.8
CUEDC1Q9NWM3 MIR218-1-201ENST00000384999 110 ntBASIC3.79□□□□□ -1.8
CUEDC1Q9NWM3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.79□□□□□ -1.8
CUEDC1Q9NWM3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.79□□□□□ -1.8
CUEDC1Q9NWM3 AC008155.2-201ENST00000464337 397 ntBASIC3.79□□□□□ -1.8
CUEDC1Q9NWM3 AC110768.1-201ENST00000509222 400 ntBASIC3.79□□□□□ -1.8
CUEDC1Q9NWM3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.79□□□□□ -1.8
CUEDC1Q9NWM3 MIR7157-201ENST00000635801 60 ntBASIC3.79□□□□□ -1.8
CUEDC1Q9NWM3 MIR3202-2-201ENST00000635980 79 ntBASIC3.79□□□□□ -1.8
CUEDC1Q9NWM3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 SNORA68.1-201ENST00000364537 132 ntBASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 RNU6-1134P-201ENST00000365156 101 ntBASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 SNORD24-201ENST00000383884 75 ntBASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 SNORD14D-201ENST00000384390 87 ntBASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 NDUFB4P4-201ENST00000404822 243 ntBASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 Z98941.1-201ENST00000407764 100 ntBASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 SNORA57.3-201ENST00000411095 141 ntBASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 RPS26P48-201ENST00000491713 339 ntBASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 RNA5SP395-201ENST00000516567 118 ntBASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 RNU6-1149P-201ENST00000516810 97 ntBASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 AC026403.1-201ENST00000518938 295 ntBASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 JPX_2.1-201ENST00000614161 69 ntBASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CUEDC1Q9NWM3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 Y_RNA.342-201ENST00000365352 113 ntBASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 AL117342.1-201ENST00000404861 406 ntBASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 RHEBP3-201ENST00000411920 351 ntBASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 RPS4XP11-201ENST00000446897 772 ntBASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 SNORA59A-201ENST00000459326 152 ntBASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 AC006445.1-201ENST00000491925 405 ntBASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 AC027419.1-201ENST00000522976 328 ntBASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 AC084364.2-201ENST00000546924 395 ntBASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 AL121772.2-201ENST00000614331 297 ntBASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 AC009093.8-201ENST00000641769 292 ntBASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.77□□□□□ -1.81
CUEDC1Q9NWM3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CUEDC1Q9NWM3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CUEDC1Q9NWM3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CUEDC1Q9NWM3 RNU6-888P-201ENST00000363010 101 ntBASIC3.76□□□□□ -1.81
CUEDC1Q9NWM3 SNORA73.2-201ENST00000364946 201 ntBASIC3.76□□□□□ -1.81
CUEDC1Q9NWM3 RNU6-57P-201ENST00000411348 103 ntBASIC3.76□□□□□ -1.81
CUEDC1Q9NWM3 AC008134.1-201ENST00000420943 193 ntBASIC3.76□□□□□ -1.81
CUEDC1Q9NWM3 RPL30P4-201ENST00000429309 333 ntBASIC3.76□□□□□ -1.81
CUEDC1Q9NWM3 AL445687.1-201ENST00000439946 251 ntBASIC3.76□□□□□ -1.81
CUEDC1Q9NWM3 PGBD4P5-201ENST00000445958 426 ntBASIC3.76□□□□□ -1.81
CUEDC1Q9NWM3 SCARNA15-202ENST00000516881 127 ntBASIC3.76□□□□□ -1.81
CUEDC1Q9NWM3 SCARNA3-201ENST00000517097 143 ntBASIC3.76□□□□□ -1.81
CUEDC1Q9NWM3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.76□□□□□ -1.81
CUEDC1Q9NWM3 MIR3200-201ENST00000580767 85 ntBASIC3.76□□□□□ -1.81
CUEDC1Q9NWM3 MIR486-1-201ENST00000612171 68 ntBASIC3.76□□□□□ -1.81
CUEDC1Q9NWM3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CUEDC1Q9NWM3 AC092435.3-201ENST00000565538 3654 ntBASIC3.75□□□□□ -1.81
CUEDC1Q9NWM3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CUEDC1Q9NWM3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CUEDC1Q9NWM3 RNU6-228P-201ENST00000362700 106 ntBASIC3.75□□□□□ -1.81
CUEDC1Q9NWM3 Y_RNA.107-201ENST00000363190 121 ntBASIC3.75□□□□□ -1.81
CUEDC1Q9NWM3 RNY1P10-201ENST00000363268 113 ntBASIC3.75□□□□□ -1.81
CUEDC1Q9NWM3 RNU6-414P-201ENST00000363705 104 ntBASIC3.75□□□□□ -1.81
CUEDC1Q9NWM3 RN7SKP220-201ENST00000410611 288 ntBASIC3.75□□□□□ -1.81
CUEDC1Q9NWM3 SNORA19.1-201ENST00000410656 129 ntBASIC3.75□□□□□ -1.81
CUEDC1Q9NWM3 RNU7-14P-201ENST00000459331 62 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms