Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNU1-40P-201ENST00000516816 164 ntBASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 RNU1-97P-201ENST00000516872 164 ntBASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 Y_RNA.713-201ENST00000517013 96 ntBASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 AC022616.4-201ENST00000522985 181 ntBASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 IGKV3-31-201ENST00000523109 329 ntBASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 AC005176.2-201ENST00000596933 147 ntBASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 AC008749.1-201ENST00000597650 306 ntBASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 Y_RNA.772-201ENST00000606692 102 ntBASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 AC022140.2-201ENST00000623500 188 ntBASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SLC6A13Q9NSD5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 Y_RNA.202-201ENST00000364083 110 ntBASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 SNORA63.7-201ENST00000365579 123 ntBASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 RNU6-20P-201ENST00000384106 107 ntBASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 Y_RNA.471-201ENST00000384312 102 ntBASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 MIR676-201ENST00000390702 67 ntBASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 RN7SKP223-201ENST00000410582 62 ntBASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 AC244636.1-201ENST00000421152 228 ntBASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 RPEP5-201ENST00000441137 268 ntBASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 SUMO1P2-201ENST00000452524 304 ntBASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 U8.20-201ENST00000459445 131 ntBASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 AC010598.1-201ENST00000510378 103 ntBASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 Y_RNA.721-201ENST00000517207 102 ntBASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 AL137100.2-201ENST00000555786 315 ntBASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 MIR5089-201ENST00000580047 84 ntBASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 AC005034.5-201ENST00000604219 466 ntBASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 AL773524.1-201ENST00000614065 229 ntBASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 AC004467.1-201ENST00000615678 330 ntBASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SLC6A13Q9NSD5 RNU6-626P-201ENST00000363354 107 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 Y_RNA.158-201ENST00000363651 101 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 RNU6-1019P-201ENST00000364424 107 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 SNORA67.3-201ENST00000384366 140 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 RNA5SP212-201ENST00000391223 107 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 AL079342.1-201ENST00000401460 267 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 RNA5SP100-201ENST00000410903 110 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 RNA5SP59-201ENST00000410922 110 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 AC009310.1-201ENST00000414414 451 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 AL356320.1-201ENST00000429616 163 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 UBL5P3-201ENST00000475112 231 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 RNU2-12P-201ENST00000517216 168 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 AC024995.1-201ENST00000523014 93 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 AC055872.1-201ENST00000570978 278 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 MIR4648-201ENST00000580107 72 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 AC104695.3-201ENST00000604052 296 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 AC124312.5-201ENST00000604451 268 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 AC016925.2-201ENST00000605108 242 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 AC005828.6-201ENST00000606610 232 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 Y_RNA.783-201ENST00000613546 102 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 U6.115-201ENST00000636045 103 ntBASIC1.91□□□□□ -2.1
SLC6A13Q9NSD5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 RNA5SP432-201ENST00000362480 116 ntBASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 SNORA33-201ENST00000363664 130 ntBASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 RNU6-694P-201ENST00000364071 147 ntBASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 Y_RNA.439-201ENST00000384119 94 ntBASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 SNORA20B-201ENST00000384220 132 ntBASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 Y_RNA.551-201ENST00000384661 102 ntBASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 SNORA64-201ENST00000384674 134 ntBASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 RNU6-823P-201ENST00000391042 103 ntBASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 AL355796.1-201ENST00000406706 323 ntBASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 RNU6-101P-201ENST00000410323 104 ntBASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 DPH3P2-201ENST00000422618 250 ntBASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 AC245047.4-201ENST00000433189 144 ntBASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 AC005002.2-201ENST00000438228 269 ntBASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 snoU13.15-201ENST00000459407 104 ntBASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 MIR4299-201ENST00000577899 72 ntBASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 MIR4448-201ENST00000584360 86 ntBASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 MIR7843-201ENST00000622274 79 ntBASIC1.9□□□□□ -2.11
SLC6A13Q9NSD5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 MTND4P1-201ENST00000457501 1466 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 RNU6-112P-201ENST00000363599 104 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 Y_RNA.243-201ENST00000364481 109 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 SNORA33.2-201ENST00000365413 134 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 Y_RNA.389-201ENST00000383924 113 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 Y_RNA.462-201ENST00000384268 102 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 Y_RNA.570-201ENST00000384750 101 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 RNA5SP467-201ENST00000391274 118 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 RNU2-2P-201ENST00000410396 191 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 AC069257.2-201ENST00000441819 155 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 MRPS10P1-201ENST00000448483 130 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 RNA5SP57-201ENST00000459463 123 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 Y_RNA.715-201ENST00000517082 110 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 AC022254.1-201ENST00000567857 235 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 MIR1273D-201ENST00000577266 86 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 MIR4423-201ENST00000580922 80 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms