Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
VTA1Q9NP79 SNORD115-30-201ENST00000364117 82 ntBASIC2.74□□□□□ -1.97
VTA1Q9NP79 SNORA25.6-201ENST00000364121 118 ntBASIC2.74□□□□□ -1.97
VTA1Q9NP79 Y_RNA.352-201ENST00000365439 102 ntBASIC2.74□□□□□ -1.97
VTA1Q9NP79 RNU6-418P-201ENST00000384035 107 ntBASIC2.74□□□□□ -1.97
VTA1Q9NP79 RNU6-160P-201ENST00000384591 107 ntBASIC2.74□□□□□ -1.97
VTA1Q9NP79 RNU6-1072P-201ENST00000384703 107 ntBASIC2.74□□□□□ -1.97
VTA1Q9NP79 RNU6-443P-201ENST00000384780 107 ntBASIC2.74□□□□□ -1.97
VTA1Q9NP79 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.74□□□□□ -1.97
VTA1Q9NP79 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.74□□□□□ -1.97
VTA1Q9NP79 snoU13.26-201ENST00000459452 105 ntBASIC2.74□□□□□ -1.97
VTA1Q9NP79 UBL5P3-201ENST00000475112 231 ntBASIC2.74□□□□□ -1.97
VTA1Q9NP79 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.74□□□□□ -1.97
VTA1Q9NP79 RNA5SP137-201ENST00000516833 135 ntBASIC2.74□□□□□ -1.97
VTA1Q9NP79 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.74□□□□□ -1.97
VTA1Q9NP79 MIR3126-201ENST00000577443 74 ntBASIC2.74□□□□□ -1.97
VTA1Q9NP79 AC025754.2-201ENST00000606491 432 ntBASIC2.74□□□□□ -1.97
VTA1Q9NP79 MIR1291-201ENST00000627649 87 ntBASIC2.74□□□□□ -1.97
VTA1Q9NP79 MTND5P6-201ENST00000422338 1798 ntBASIC2.74□□□□□ -1.97
VTA1Q9NP79 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VTA1Q9NP79 SNORA25.1-201ENST00000362326 128 ntBASIC2.73□□□□□ -1.97
VTA1Q9NP79 Y_RNA.237-201ENST00000364439 102 ntBASIC2.73□□□□□ -1.97
VTA1Q9NP79 SNORD14D-201ENST00000384390 87 ntBASIC2.73□□□□□ -1.97
VTA1Q9NP79 RNU6-102P-201ENST00000384485 104 ntBASIC2.73□□□□□ -1.97
VTA1Q9NP79 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
VTA1Q9NP79 SUMO2P18-201ENST00000518873 252 ntBASIC2.73□□□□□ -1.97
VTA1Q9NP79 DEFB108E-201ENST00000524692 240 ntBASIC2.73□□□□□ -1.97
VTA1Q9NP79 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.73□□□□□ -1.97
VTA1Q9NP79 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.73□□□□□ -1.97
VTA1Q9NP79 MIR4648-201ENST00000580107 72 ntBASIC2.73□□□□□ -1.97
VTA1Q9NP79 MIR3671-201ENST00000580455 88 ntBASIC2.73□□□□□ -1.97
VTA1Q9NP79 FO624990.1-201ENST00000636373 85 ntBASIC2.73□□□□□ -1.97
VTA1Q9NP79 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VTA1Q9NP79 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VTA1Q9NP79 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
VTA1Q9NP79 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VTA1Q9NP79 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
VTA1Q9NP79 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.72□□□□□ -1.97
VTA1Q9NP79 SNORD114-30-201ENST00000364448 72 ntBASIC2.72□□□□□ -1.97
VTA1Q9NP79 Y_RNA.286-201ENST00000364813 102 ntBASIC2.72□□□□□ -1.97
VTA1Q9NP79 Y_RNA.476-201ENST00000384347 108 ntBASIC2.72□□□□□ -1.97
VTA1Q9NP79 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
VTA1Q9NP79 AC007064.1-201ENST00000412238 351 ntBASIC2.72□□□□□ -1.97
VTA1Q9NP79 AL353689.1-201ENST00000438895 199 ntBASIC2.72□□□□□ -1.97
VTA1Q9NP79 snoU13.15-201ENST00000459407 104 ntBASIC2.72□□□□□ -1.97
VTA1Q9NP79 RN7SL297P-201ENST00000483161 293 ntBASIC2.72□□□□□ -1.97
VTA1Q9NP79 RNU6-436P-201ENST00000516171 114 ntBASIC2.72□□□□□ -1.97
VTA1Q9NP79 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.72□□□□□ -1.97
VTA1Q9NP79 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.72□□□□□ -1.97
VTA1Q9NP79 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.72□□□□□ -1.97
VTA1Q9NP79 AC046143.2-201ENST00000609789 160 ntBASIC2.72□□□□□ -1.97
VTA1Q9NP79 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.72□□□□□ -1.97
VTA1Q9NP79 AC010297.1-201ENST00000623948 149 ntBASIC2.72□□□□□ -1.97
VTA1Q9NP79 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
VTA1Q9NP79 RNU1-148P-201ENST00000384472 162 ntBASIC2.71□□□□□ -1.98
VTA1Q9NP79 RNU11-5P-201ENST00000391216 129 ntBASIC2.71□□□□□ -1.98
VTA1Q9NP79 MIR873-201ENST00000401120 77 ntBASIC2.71□□□□□ -1.98
VTA1Q9NP79 AL031003.1-201ENST00000404229 172 ntBASIC2.71□□□□□ -1.98
VTA1Q9NP79 RNU6-847P-201ENST00000411115 108 ntBASIC2.71□□□□□ -1.98
VTA1Q9NP79 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.71□□□□□ -1.98
VTA1Q9NP79 AC016717.1-201ENST00000448918 286 ntBASIC2.71□□□□□ -1.98
VTA1Q9NP79 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VTA1Q9NP79 AC026436.1-201ENST00000510537 270 ntBASIC2.71□□□□□ -1.98
VTA1Q9NP79 RNU6-1023P-201ENST00000516137 106 ntBASIC2.71□□□□□ -1.98
VTA1Q9NP79 RNA5SP281-201ENST00000516504 135 ntBASIC2.71□□□□□ -1.98
VTA1Q9NP79 IGKV3-31-201ENST00000523109 329 ntBASIC2.71□□□□□ -1.98
VTA1Q9NP79 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.71□□□□□ -1.98
VTA1Q9NP79 AC110588.1-201ENST00000559699 137 ntBASIC2.71□□□□□ -1.98
VTA1Q9NP79 MIR1273D-201ENST00000577266 86 ntBASIC2.71□□□□□ -1.98
VTA1Q9NP79 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
VTA1Q9NP79 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VTA1Q9NP79 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VTA1Q9NP79 RNA5SP432-201ENST00000362480 116 ntBASIC2.7□□□□□ -1.98
VTA1Q9NP79 RNU6-324P-201ENST00000363957 106 ntBASIC2.7□□□□□ -1.98
VTA1Q9NP79 Y_RNA.416-201ENST00000384014 113 ntBASIC2.7□□□□□ -1.98
VTA1Q9NP79 RNU6-505P-201ENST00000384427 107 ntBASIC2.7□□□□□ -1.98
VTA1Q9NP79 MTCO1P5-201ENST00000433573 344 ntBASIC2.7□□□□□ -1.98
VTA1Q9NP79 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.7□□□□□ -1.98
VTA1Q9NP79 SNORD65B-201ENST00000459126 73 ntBASIC2.7□□□□□ -1.98
VTA1Q9NP79 RNU6-1271P-201ENST00000517049 105 ntBASIC2.7□□□□□ -1.98
VTA1Q9NP79 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.7□□□□□ -1.98
VTA1Q9NP79 AC012433.1-201ENST00000588916 398 ntBASIC2.7□□□□□ -1.98
VTA1Q9NP79 AL512605.2-201ENST00000592972 256 ntBASIC2.7□□□□□ -1.98
VTA1Q9NP79 AL049779.4-201ENST00000604500 156 ntBASIC2.7□□□□□ -1.98
VTA1Q9NP79 BX284668.6-201ENST00000606899 438 ntBASIC2.7□□□□□ -1.98
VTA1Q9NP79 AL353149.1-201ENST00000610667 244 ntBASIC2.7□□□□□ -1.98
VTA1Q9NP79 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VTA1Q9NP79 UBE2WP1-201ENST00000362030 340 ntBASIC2.69□□□□□ -1.98
VTA1Q9NP79 Y_RNA.307-201ENST00000365022 117 ntBASIC2.69□□□□□ -1.98
VTA1Q9NP79 Y_RNA.447-201ENST00000384184 113 ntBASIC2.69□□□□□ -1.98
VTA1Q9NP79 RNU2-38P-201ENST00000410856 79 ntBASIC2.69□□□□□ -1.98
VTA1Q9NP79 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.69□□□□□ -1.98
VTA1Q9NP79 CR769767.1-201ENST00000436337 346 ntBASIC2.69□□□□□ -1.98
VTA1Q9NP79 HSPE1P13-201ENST00000451143 297 ntBASIC2.69□□□□□ -1.98
VTA1Q9NP79 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.69□□□□□ -1.98
VTA1Q9NP79 U2.14-201ENST00000615943 113 ntBASIC2.69□□□□□ -1.98
VTA1Q9NP79 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VTA1Q9NP79 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
VTA1Q9NP79 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.69□□□□□ -1.98
VTA1Q9NP79 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms