Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.26□□□□□ -2.37
NKX6-2Q9C056 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.26□□□□□ -2.37
NKX6-2Q9C056 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.26□□□□□ -2.37
NKX6-2Q9C056 AC091178.2-201ENST00000584401 117 ntBASIC0.26□□□□□ -2.37
NKX6-2Q9C056 AC009248.2-201ENST00000619826 254 ntBASIC0.26□□□□□ -2.37
NKX6-2Q9C056 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.26□□□□□ -2.37
NKX6-2Q9C056 AL442644.1-201ENST00000454390 3105 ntBASIC0.26□□□□□ -2.37
NKX6-2Q9C056 SNORD113-7-201ENST00000363762 77 ntBASIC0.25□□□□□ -2.37
NKX6-2Q9C056 Y_RNA.179-201ENST00000363844 90 ntBASIC0.25□□□□□ -2.37
NKX6-2Q9C056 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.25□□□□□ -2.37
NKX6-2Q9C056 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
NKX6-2Q9C056 SNORA20B-201ENST00000384220 132 ntBASIC0.25□□□□□ -2.37
NKX6-2Q9C056 MIR562-201ENST00000384894 95 ntBASIC0.25□□□□□ -2.37
NKX6-2Q9C056 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.25□□□□□ -2.37
NKX6-2Q9C056 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.25□□□□□ -2.37
NKX6-2Q9C056 AC093019.1-201ENST00000443135 252 ntBASIC0.25□□□□□ -2.37
NKX6-2Q9C056 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.25□□□□□ -2.37
NKX6-2Q9C056 RNU6-1208P-201ENST00000459588 107 ntBASIC0.25□□□□□ -2.37
NKX6-2Q9C056 RPL30P10-201ENST00000488148 337 ntBASIC0.25□□□□□ -2.37
NKX6-2Q9C056 AC002350.1-201ENST00000490759 375 ntBASIC0.25□□□□□ -2.37
NKX6-2Q9C056 TRMT112P2-201ENST00000512910 132 ntBASIC0.25□□□□□ -2.37
NKX6-2Q9C056 RNA5SP458-201ENST00000516188 119 ntBASIC0.25□□□□□ -2.37
NKX6-2Q9C056 MIR4524B-201ENST00000581569 115 ntBASIC0.25□□□□□ -2.37
NKX6-2Q9C056 MIR6516-201ENST00000630554 81 ntBASIC0.25□□□□□ -2.37
NKX6-2Q9C056 MTND5P16-201ENST00000460269 1703 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 MIR96-201ENST00000362288 78 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 Y_RNA.151-201ENST00000363566 112 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 RNA5SP499-201ENST00000363982 119 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 RNU6-280P-201ENST00000364145 104 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 RNU4-41P-201ENST00000364426 143 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 RNU6-348P-201ENST00000384386 107 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 RNU6-163P-201ENST00000384396 106 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 RNU6-1067P-201ENST00000384752 107 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 RNU6-159P-201ENST00000391080 106 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 RN7SKP142-201ENST00000411236 328 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 MTCYBP10-201ENST00000424905 650 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 AL445567.1-201ENST00000439121 144 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.24□□□□□ -2.37
NKX6-2Q9C056 MTCO1P19-201ENST00000443487 500 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 AC093303.1-201ENST00000514549 295 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 RNU7-41P-201ENST00000515917 61 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 AP003716.2-201ENST00000528260 108 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 AC026371.1-201ENST00000551867 419 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.24□□□□□ -2.37
NKX6-2Q9C056 AC100830.2-201ENST00000581636 240 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 AC120024.3-201ENST00000603167 156 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 AC007684.1-201ENST00000609671 477 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 AC073534.2-201ENST00000620377 381 ntBASIC0.24□□□□□ -2.37
NKX6-2Q9C056 RNY1P10-201ENST00000363268 113 ntBASIC0.23□□□□□ -2.37
NKX6-2Q9C056 RNU6-833P-201ENST00000363486 107 ntBASIC0.23□□□□□ -2.37
NKX6-2Q9C056 Y_RNA.167-201ENST00000363735 109 ntBASIC0.23□□□□□ -2.37
NKX6-2Q9C056 MIR23A-201ENST00000385245 73 ntBASIC0.23□□□□□ -2.37
NKX6-2Q9C056 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
NKX6-2Q9C056 EIF4E2P1-201ENST00000393781 255 ntBASIC0.23□□□□□ -2.37
NKX6-2Q9C056 Y_RNA.595-201ENST00000410403 105 ntBASIC0.23□□□□□ -2.37
NKX6-2Q9C056 RPS20P10-201ENST00000451209 253 ntBASIC0.23□□□□□ -2.37
NKX6-2Q9C056 MTCO2P30-201ENST00000503662 364 ntBASIC0.23□□□□□ -2.37
NKX6-2Q9C056 CYCTP-201ENST00000504253 315 ntBASIC0.23□□□□□ -2.37
NKX6-2Q9C056 RNA5SP20-201ENST00000515976 84 ntBASIC0.23□□□□□ -2.37
NKX6-2Q9C056 RNU6-229P-201ENST00000516614 102 ntBASIC0.23□□□□□ -2.37
NKX6-2Q9C056 RNA5SP102-201ENST00000516865 106 ntBASIC0.23□□□□□ -2.37
NKX6-2Q9C056 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.23□□□□□ -2.37
NKX6-2Q9C056 MIR4528-201ENST00000577763 90 ntBASIC0.23□□□□□ -2.37
NKX6-2Q9C056 MIR4714-201ENST00000580728 77 ntBASIC0.23□□□□□ -2.37
NKX6-2Q9C056 AC093424.1-201ENST00000604999 338 ntBASIC0.23□□□□□ -2.37
NKX6-2Q9C056 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.23□□□□□ -2.37
NKX6-2Q9C056 AC068137.4-201ENST00000638485 296 ntBASIC0.23□□□□□ -2.37
NKX6-2Q9C056 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
NKX6-2Q9C056 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
NKX6-2Q9C056 Y_RNA.1-201ENST00000352915 104 ntBASIC0.22□□□□□ -2.37
NKX6-2Q9C056 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
NKX6-2Q9C056 RNU1-93P-201ENST00000364704 169 ntBASIC0.22□□□□□ -2.37
NKX6-2Q9C056 MIR516B2-201ENST00000385190 85 ntBASIC0.22□□□□□ -2.37
NKX6-2Q9C056 MTCO1P20-201ENST00000425366 358 ntBASIC0.22□□□□□ -2.37
NKX6-2Q9C056 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.22□□□□□ -2.37
NKX6-2Q9C056 Z98949.2-201ENST00000440996 144 ntBASIC0.22□□□□□ -2.37
NKX6-2Q9C056 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.22□□□□□ -2.37
NKX6-2Q9C056 RN7SKP164-201ENST00000516138 266 ntBASIC0.22□□□□□ -2.37
NKX6-2Q9C056 RNU6-415P-201ENST00000516252 97 ntBASIC0.22□□□□□ -2.37
NKX6-2Q9C056 RN7SKP12-201ENST00000516275 143 ntBASIC0.22□□□□□ -2.37
NKX6-2Q9C056 RNA5SP134-201ENST00000516492 96 ntBASIC0.22□□□□□ -2.37
NKX6-2Q9C056 RN7SKP287-201ENST00000516546 266 ntBASIC0.22□□□□□ -2.37
NKX6-2Q9C056 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.22□□□□□ -2.37
NKX6-2Q9C056 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.22□□□□□ -2.37
NKX6-2Q9C056 AC073648.5-201ENST00000603502 305 ntBASIC0.22□□□□□ -2.37
NKX6-2Q9C056 AL136317.1-201ENST00000612653 226 ntBASIC0.22□□□□□ -2.37
NKX6-2Q9C056 AL158063.1-201ENST00000615349 536 ntBASIC0.22□□□□□ -2.37
NKX6-2Q9C056 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
NKX6-2Q9C056 RNU6-1103P-201ENST00000384150 107 ntBASIC0.21□□□□□ -2.38
NKX6-2Q9C056 RNU5A-2P-201ENST00000384337 116 ntBASIC0.21□□□□□ -2.38
NKX6-2Q9C056 MIR452-201ENST00000385020 85 ntBASIC0.21□□□□□ -2.38
NKX6-2Q9C056 MIR140-201ENST00000385282 100 ntBASIC0.21□□□□□ -2.38
NKX6-2Q9C056 SNORD105-201ENST00000386910 85 ntBASIC0.21□□□□□ -2.38
NKX6-2Q9C056 MRPS18CP6-201ENST00000423587 223 ntBASIC0.21□□□□□ -2.38
NKX6-2Q9C056 MTND3P7-201ENST00000474435 343 ntBASIC0.21□□□□□ -2.38
NKX6-2Q9C056 AC083904.1-201ENST00000487828 231 ntBASIC0.21□□□□□ -2.38
NKX6-2Q9C056 AF235103.2-201ENST00000525753 346 ntBASIC0.21□□□□□ -2.38
NKX6-2Q9C056 AC036111.3-201ENST00000526389 112 ntBASIC0.21□□□□□ -2.38
NKX6-2Q9C056 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.21□□□□□ -2.38
NKX6-2Q9C056 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms