Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AL513423.1-201ENST00000621695 132 ntBASIC0.87□□□□□ -2.27
PCDH11XQ9BZA7 AC027335.2-201ENST00000624030 375 ntBASIC0.87□□□□□ -2.27
PCDH11XQ9BZA7 RNA5SP347-201ENST00000362445 119 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 RNU6-280P-201ENST00000364145 104 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 Y_RNA.319-201ENST00000365138 92 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 Y_RNA.458-201ENST00000384240 102 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 MIR146A-201ENST00000385201 99 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 RNU6-440P-201ENST00000390882 105 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 AL034345.1-201ENST00000407768 123 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 RNU6-1068P-201ENST00000410958 103 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 AC010154.1-201ENST00000425857 269 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 AC245047.3-201ENST00000429428 127 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 MTND1P15-201ENST00000579262 949 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 PIGPP4-201ENST00000584447 307 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 POLR3GP2-201ENST00000588366 668 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 AC010620.1-201ENST00000601088 1102 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 AL162413.1-201ENST00000603198 110 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 AL513534.2-201ENST00000603836 250 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 Z99129.1-201ENST00000612510 255 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 AC068137.4-201ENST00000638485 296 ntBASIC0.86□□□□□ -2.27
PCDH11XQ9BZA7 AL589743.1-201ENST00000551932 2712 ntBASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 Y_RNA.151-201ENST00000363566 112 ntBASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 Y_RNA.530-201ENST00000384587 101 ntBASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 AF228730.1-201ENST00000397972 663 ntBASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 ZNF885P-201ENST00000420174 1098 ntBASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 ACA59.1-201ENST00000515966 143 ntBASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 RNU7-128P-201ENST00000517247 62 ntBASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 AC027288.2-201ENST00000553028 243 ntBASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 7SK.7-201ENST00000603504 247 ntBASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 AL022345.2-201ENST00000606307 135 ntBASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 BX284668.6-201ENST00000606899 438 ntBASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 AC006435.5-201ENST00000624486 112 ntBASIC0.85□□□□□ -2.27
PCDH11XQ9BZA7 AL391516.1-201ENST00000554380 2449 ntBASIC0.84□□□□□ -2.27
PCDH11XQ9BZA7 MTND4P12-201ENST00000498999 1377 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 MIR330-201ENST00000362196 94 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 Y_RNA.373-201ENST00000365600 103 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 RNU6-716P-201ENST00000365621 103 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 RNU6-95P-201ENST00000384697 107 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 RNU6-541P-201ENST00000384709 110 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 AL356776.1-201ENST00000406574 447 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 RNU6-1186P-201ENST00000410429 97 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 Z82188.1-201ENST00000436709 154 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 MTND1P11-201ENST00000456661 876 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 AC019235.1-201ENST00000503847 207 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 RNU6-165P-201ENST00000517170 99 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 RNA5SP454-201ENST00000517231 127 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 ZNF519P2-201ENST00000557032 169 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 NBR2-204ENST00000587322 63 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 AC010525.2-201ENST00000590920 195 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 AL138726.1-201ENST00000614873 333 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 AC073349.3-201ENST00000617616 186 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 AC068647.2-201ENST00000637380 353 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 AC099654.12-201ENST00000639868 649 ntBASIC0.84□□□□□ -2.28
PCDH11XQ9BZA7 RNU6-873P-201ENST00000363833 107 ntBASIC0.83□□□□□ -2.28
PCDH11XQ9BZA7 SNORD87-201ENST00000364849 89 ntBASIC0.83□□□□□ -2.28
PCDH11XQ9BZA7 RNU6-793P-201ENST00000384233 104 ntBASIC0.83□□□□□ -2.28
PCDH11XQ9BZA7 RNU6-159P-201ENST00000391080 106 ntBASIC0.83□□□□□ -2.28
PCDH11XQ9BZA7 RNA5SP127-201ENST00000411051 133 ntBASIC0.83□□□□□ -2.28
PCDH11XQ9BZA7 RAB28P5-201ENST00000427490 651 ntBASIC0.83□□□□□ -2.28
PCDH11XQ9BZA7 AC005002.2-201ENST00000438228 269 ntBASIC0.83□□□□□ -2.28
PCDH11XQ9BZA7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.83□□□□□ -2.28
PCDH11XQ9BZA7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.83□□□□□ -2.28
PCDH11XQ9BZA7 Y_RNA.665-201ENST00000516177 98 ntBASIC0.83□□□□□ -2.28
PCDH11XQ9BZA7 RNU6-1281P-201ENST00000516223 105 ntBASIC0.83□□□□□ -2.28
PCDH11XQ9BZA7 RNA5SP476-201ENST00000516613 103 ntBASIC0.83□□□□□ -2.28
PCDH11XQ9BZA7 AC026407.1-201ENST00000518369 204 ntBASIC0.83□□□□□ -2.28
PCDH11XQ9BZA7 AK6P2-201ENST00000549020 471 ntBASIC0.83□□□□□ -2.28
PCDH11XQ9BZA7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 MIR517A-201ENST00000385001 87 ntBASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 MIR660-201ENST00000385235 97 ntBASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 RNU6-908P-201ENST00000410160 94 ntBASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 MTATP6P17-201ENST00000431030 672 ntBASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 SNORA31.4-201ENST00000516049 129 ntBASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 SNORA70.22-201ENST00000517160 124 ntBASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 APOOP3-201ENST00000536787 586 ntBASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 MIR5696-201ENST00000578474 85 ntBASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 SNORA28-201ENST00000606769 126 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms