Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TIMP4Q99727 AC008873.1-201ENST00000625051 138 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.5□□□□□ -2.01
TIMP4Q99727 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TIMP4Q99727 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.5□□□□□ -2.01
TIMP4Q99727 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.5□□□□□ -2.01
TIMP4Q99727 AC068700.1-201ENST00000565862 3754 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TIMP4Q99727 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.49□□□□□ -2.01
TIMP4Q99727 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TIMP4Q99727 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TIMP4Q99727 RNU6-704P-201ENST00000364162 103 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 SNORD56.5-201ENST00000364281 72 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 Y_RNA.441-201ENST00000384123 112 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 SNORA72.4-201ENST00000384174 132 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 Y_RNA.572-201ENST00000384757 98 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 MIR1294-201ENST00000408503 142 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 AL513477.1-202ENST00000417061 214 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 SEPT7P4-201ENST00000437076 306 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.49□□□□□ -2.01
TIMP4Q99727 SNORD109B-201ENST00000458961 67 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 SNORD109A-201ENST00000459128 67 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 HMGN2P9-201ENST00000476875 229 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 RPS27AP9-201ENST00000477681 438 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 Y_RNA.797-201ENST00000515977 94 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 SNORA9.3-201ENST00000516383 129 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 AC100767.1-201ENST00000528178 123 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 RPL17P51-201ENST00000605218 238 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 AC108706.1-201ENST00000611053 297 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.49□□□□□ -2.01
TIMP4Q99727 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.49□□□□□ -2.01
TIMP4Q99727 AC007336.1-201ENST00000576365 3828 ntBASIC2.49□□□□□ -2.01
TIMP4Q99727 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TIMP4Q99727 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TIMP4Q99727 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
TIMP4Q99727 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
TIMP4Q99727 Y_RNA.24-201ENST00000362508 103 ntBASIC2.48□□□□□ -2.01
TIMP4Q99727 RNU6-486P-201ENST00000363116 107 ntBASIC2.48□□□□□ -2.01
TIMP4Q99727 Y_RNA.357-201ENST00000365487 109 ntBASIC2.48□□□□□ -2.01
TIMP4Q99727 RNU6-1083P-201ENST00000384022 107 ntBASIC2.48□□□□□ -2.01
TIMP4Q99727 RNU6-1274P-201ENST00000384557 107 ntBASIC2.48□□□□□ -2.01
TIMP4Q99727 MIR9-1-201ENST00000385198 89 ntBASIC2.48□□□□□ -2.01
TIMP4Q99727 AL139095.1-201ENST00000404326 391 ntBASIC2.48□□□□□ -2.01
TIMP4Q99727 MIR1185-2-201ENST00000408687 86 ntBASIC2.48□□□□□ -2.01
TIMP4Q99727 RNU2-52P-201ENST00000410680 190 ntBASIC2.48□□□□□ -2.01
TIMP4Q99727 RNA5SP21-201ENST00000410917 96 ntBASIC2.48□□□□□ -2.01
TIMP4Q99727 AL109933.2-201ENST00000452651 260 ntBASIC2.48□□□□□ -2.01
TIMP4Q99727 RNU7-57P-201ENST00000459540 60 ntBASIC2.48□□□□□ -2.01
TIMP4Q99727 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.48□□□□□ -2.01
TIMP4Q99727 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.48□□□□□ -2.01
TIMP4Q99727 AC027419.1-201ENST00000522976 328 ntBASIC2.48□□□□□ -2.01
TIMP4Q99727 MIR4753-201ENST00000585119 83 ntBASIC2.48□□□□□ -2.01
TIMP4Q99727 ZNF861P-201ENST00000588126 639 ntBASIC2.48□□□□□ -2.01
TIMP4Q99727 AL078604.3-201ENST00000615580 211 ntBASIC2.48□□□□□ -2.01
TIMP4Q99727 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.48□□□□□ -2.01
TIMP4Q99727 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.48□□□□□ -2.01
TIMP4Q99727 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.47□□□□□ -2.01
TIMP4Q99727 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TIMP4Q99727 Y_RNA.124-201ENST00000363339 93 ntBASIC2.47□□□□□ -2.01
TIMP4Q99727 Y_RNA.172-201ENST00000363765 102 ntBASIC2.47□□□□□ -2.01
TIMP4Q99727 RNU6-899P-201ENST00000363947 107 ntBASIC2.47□□□□□ -2.01
TIMP4Q99727 SNORA25.6-201ENST00000364121 118 ntBASIC2.47□□□□□ -2.01
TIMP4Q99727 RNU6-312P-201ENST00000364629 107 ntBASIC2.47□□□□□ -2.01
TIMP4Q99727 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.47□□□□□ -2.01
TIMP4Q99727 HSPE1P21-201ENST00000438283 308 ntBASIC2.47□□□□□ -2.01
TIMP4Q99727 AC016717.1-201ENST00000448918 286 ntBASIC2.47□□□□□ -2.01
TIMP4Q99727 RNU7-141P-201ENST00000459304 62 ntBASIC2.47□□□□□ -2.01
TIMP4Q99727 RPL23AP94-201ENST00000512518 302 ntBASIC2.47□□□□□ -2.01
TIMP4Q99727 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.47□□□□□ -2.01
TIMP4Q99727 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.47□□□□□ -2.01
TIMP4Q99727 AP001485.1-201ENST00000604799 199 ntBASIC2.47□□□□□ -2.01
TIMP4Q99727 AC069294.1-201ENST00000608397 350 ntBASIC2.47□□□□□ -2.01
TIMP4Q99727 MIR7515-201ENST00000637837 67 ntBASIC2.47□□□□□ -2.01
TIMP4Q99727 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
TIMP4Q99727 MIR26A1-201ENST00000362205 77 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 Y_RNA.75-201ENST00000362927 97 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 snoU2_19.4-201ENST00000364329 80 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 RNU6-1180P-201ENST00000364935 107 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 Y_RNA.310-201ENST00000365063 113 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 Y_RNA.368-201ENST00000365547 113 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 RNU6-449P-201ENST00000383914 107 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 RNU1-109P-201ENST00000383960 147 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 Y_RNA.456-201ENST00000384232 111 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 SNORA8.3-201ENST00000384679 139 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 MIR626-201ENST00000385032 94 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 RNU6-381P-201ENST00000391259 108 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 SNORA11.2-201ENST00000408318 127 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 MIR1283-1-201ENST00000408494 87 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 RNU6-1328P-201ENST00000410938 106 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 AC090515.1-201ENST00000465295 476 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.46□□□□□ -2.02
TIMP4Q99727 SEM1P1-201ENST00000506694 209 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.46□□□□□ -2.02
TIMP4Q99727 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.46□□□□□ -2.02
TIMP4Q99727 ATP5EP1-201ENST00000510257 156 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 SNORA70.12-201ENST00000516084 153 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 RNU6-965P-201ENST00000516721 96 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 RNU6-586P-201ENST00000517265 104 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms