Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RNU6-612P-201ENST00000516909 102 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 Y_RNA.718-201ENST00000517110 102 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 MRPS36P4-201ENST00000534436 298 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 AC026371.1-201ENST00000551867 419 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.16□□□□□ -2.22
CDX2Q99626 AC008269.2-201ENST00000561915 1105 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.16□□□□□ -2.22
CDX2Q99626 SNORA77B-201ENST00000578179 125 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
CDX2Q99626 AC009229.3-201ENST00000608056 282 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.16□□□□□ -2.22
CDX2Q99626 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.16□□□□□ -2.22
CDX2Q99626 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.16□□□□□ -2.22
CDX2Q99626 MIR369-201ENST00000362155 70 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 RNU1-62P-201ENST00000362599 164 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 SNORD50.1-201ENST00000362987 71 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 RNU6-1188P-201ENST00000363795 107 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 MIR517A-201ENST00000385001 87 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
CDX2Q99626 RNU6-1050P-201ENST00000410388 107 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 AL354751.2-201ENST00000415471 210 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 AC009161.1-201ENST00000417306 376 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 NCOR1P3-201ENST00000420479 303 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 MTND1P14-201ENST00000427400 950 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 Z82188.1-201ENST00000436709 154 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 CHEK2P4-201ENST00000450340 246 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 AC112492.4-201ENST00000456549 352 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 MIR2053-201ENST00000459295 91 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 SNORD19B-201ENST00000459623 84 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 RNU6-856P-201ENST00000516959 98 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.15□□□□□ -2.23
CDX2Q99626 CPDP1-201ENST00000579660 283 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 AP001485.1-201ENST00000604799 199 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 MIR7974-201ENST00000615835 79 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 AC010487.4-201ENST00000637027 61 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 AC073544.1-201ENST00000600110 1595 ntBASIC1.15□□□□□ -2.23
CDX2Q99626 RNU6-874P-201ENST00000362390 105 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 RNU6-227P-201ENST00000362865 103 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 Y_RNA.80-201ENST00000362996 102 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 SNORD114-23-201ENST00000363536 72 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 SNORA63D-201ENST00000364359 132 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 RNU6-890P-201ENST00000384121 107 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 Y_RNA.485-201ENST00000384395 102 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 Y_RNA.496-201ENST00000384444 101 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 Y_RNA.533-201ENST00000384596 114 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 MIR150-201ENST00000385048 84 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 SNORA75.4-201ENST00000391278 119 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 RPL37P10-201ENST00000412884 288 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 AC074085.1-201ENST00000413598 418 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 MRPS18CP6-201ENST00000423587 223 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 UBE2V1P7-201ENST00000446395 340 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 RPL30P15-201ENST00000457129 321 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.14□□□□□ -2.23
CDX2Q99626 RNU7-14P-201ENST00000459331 62 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 RNU6-1037P-201ENST00000459571 107 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 RPL9P9-202ENST00000466501 579 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 AC025465.3-201ENST00000510570 311 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 SCARNA16.2-201ENST00000516520 172 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 Y_RNA.701-201ENST00000516812 110 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 RNA5SP437-201ENST00000517249 129 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 CBX3P8-201ENST00000532412 525 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 AC068338.1-201ENST00000565567 176 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 AC005668.1-201ENST00000571142 476 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 AC113139.1-201ENST00000605049 239 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 AL353621.2-201ENST00000605340 133 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 AC018462.2-201ENST00000605375 395 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 AL353149.1-201ENST00000610667 244 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 AL669831.3-213ENST00000636676 183 ntBASIC1.14□□□□□ -2.23
CDX2Q99626 MIR26B-201ENST00000362251 77 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 Y_RNA.5-201ENST00000362334 102 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 SNORA29-201ENST00000384183 140 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 RNU6-35P-201ENST00000384530 107 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 RNU6-601P-201ENST00000384540 107 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 RNY4P36-201ENST00000391116 96 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
CDX2Q99626 MIR208B-201ENST00000401172 77 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 AL161935.2-201ENST00000414627 60 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 ARL5AP1-201ENST00000418991 388 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CDX2Q99626 AL358176.2-201ENST00000425769 204 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 AC096644.2-201ENST00000429278 159 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 AL160004.2-201ENST00000432935 350 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 AL353997.1-201ENST00000432936 108 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 AC079354.2-201ENST00000453523 154 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 HMGN2P9-201ENST00000476875 229 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 RPL26P26-201ENST00000480251 434 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.13□□□□□ -2.23
CDX2Q99626 AC067942.3-201ENST00000512025 362 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 RNU6-1137P-201ENST00000517073 99 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 AC020661.2-201ENST00000560114 134 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 AC090517.1-201ENST00000569307 266 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 MIR5094-201ENST00000578766 85 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 AC100830.2-201ENST00000581636 240 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 AC005014.2-201ENST00000607795 599 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 AC019193.3-201ENST00000609144 554 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 AL133215.3-201ENST00000609801 448 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 MIR8074-201ENST00000615081 81 ntBASIC1.13□□□□□ -2.23
CDX2Q99626 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms