Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 RNU6-874P-201ENST00000362390 105 ntBASIC1.77□□□□□ -2.13
SKA1Q96BD8 Y_RNA.498-201ENST00000384460 102 ntBASIC1.77□□□□□ -2.13
SKA1Q96BD8 RNU6-1065P-201ENST00000384513 106 ntBASIC1.77□□□□□ -2.13
SKA1Q96BD8 RNU6-997P-201ENST00000384725 107 ntBASIC1.77□□□□□ -2.13
SKA1Q96BD8 MRPL42P3-201ENST00000401492 326 ntBASIC1.77□□□□□ -2.13
SKA1Q96BD8 MRPL35P1-201ENST00000404272 572 ntBASIC1.77□□□□□ -2.13
SKA1Q96BD8 PDCL2P1-201ENST00000419302 352 ntBASIC1.77□□□□□ -2.13
SKA1Q96BD8 AC245047.3-201ENST00000429428 127 ntBASIC1.77□□□□□ -2.13
SKA1Q96BD8 AC003989.2-201ENST00000440224 169 ntBASIC1.77□□□□□ -2.13
SKA1Q96BD8 RPS27P1-201ENST00000450552 247 ntBASIC1.77□□□□□ -2.13
SKA1Q96BD8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.77□□□□□ -2.13
SKA1Q96BD8 RNU6-264P-201ENST00000517134 104 ntBASIC1.77□□□□□ -2.13
SKA1Q96BD8 AC027419.1-201ENST00000522976 328 ntBASIC1.77□□□□□ -2.13
SKA1Q96BD8 MIR5690-201ENST00000583739 73 ntBASIC1.77□□□□□ -2.13
SKA1Q96BD8 AL929325.1-201ENST00000603096 117 ntBASIC1.77□□□□□ -2.13
SKA1Q96BD8 snoU13.31-201ENST00000607291 104 ntBASIC1.77□□□□□ -2.13
SKA1Q96BD8 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.77□□□□□ -2.13
SKA1Q96BD8 AC073544.1-201ENST00000600110 1595 ntBASIC1.76□□□□□ -2.13
SKA1Q96BD8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SKA1Q96BD8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.76□□□□□ -2.13
SKA1Q96BD8 SNORD81.2-201ENST00000365153 76 ntBASIC1.76□□□□□ -2.13
SKA1Q96BD8 MIR9-3-201ENST00000385084 90 ntBASIC1.76□□□□□ -2.13
SKA1Q96BD8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.76□□□□□ -2.13
SKA1Q96BD8 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.76□□□□□ -2.13
SKA1Q96BD8 AC027119.1-201ENST00000440877 241 ntBASIC1.76□□□□□ -2.13
SKA1Q96BD8 SNORD13-201ENST00000459299 104 ntBASIC1.76□□□□□ -2.13
SKA1Q96BD8 AC010469.2-201ENST00000496412 480 ntBASIC1.76□□□□□ -2.13
SKA1Q96BD8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.76□□□□□ -2.13
SKA1Q96BD8 PRDX4P1-201ENST00000507189 574 ntBASIC1.76□□□□□ -2.13
SKA1Q96BD8 RNU7-128P-201ENST00000517247 62 ntBASIC1.76□□□□□ -2.13
SKA1Q96BD8 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.76□□□□□ -2.13
SKA1Q96BD8 AC022217.4-201ENST00000604389 163 ntBASIC1.76□□□□□ -2.13
SKA1Q96BD8 MIR8054-201ENST00000620877 86 ntBASIC1.76□□□□□ -2.13
SKA1Q96BD8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.75□□□□□ -2.13
SKA1Q96BD8 RNA5SP361-201ENST00000362686 118 ntBASIC1.75□□□□□ -2.13
SKA1Q96BD8 MIR513A1-201ENST00000385138 129 ntBASIC1.75□□□□□ -2.13
SKA1Q96BD8 RNU6-370P-201ENST00000411008 104 ntBASIC1.75□□□□□ -2.13
SKA1Q96BD8 AC114482.1-201ENST00000418010 247 ntBASIC1.75□□□□□ -2.13
SKA1Q96BD8 AL606517.2-201ENST00000442855 241 ntBASIC1.75□□□□□ -2.13
SKA1Q96BD8 MIR2053-201ENST00000459295 91 ntBASIC1.75□□□□□ -2.13
SKA1Q96BD8 MTND4P17-201ENST00000470444 350 ntBASIC1.75□□□□□ -2.13
SKA1Q96BD8 AL163540.1-201ENST00000485382 386 ntBASIC1.75□□□□□ -2.13
SKA1Q96BD8 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.75□□□□□ -2.13
SKA1Q96BD8 AC019176.1-201ENST00000518519 225 ntBASIC1.75□□□□□ -2.13
SKA1Q96BD8 AC023157.2-201ENST00000540596 141 ntBASIC1.75□□□□□ -2.13
SKA1Q96BD8 AC018448.1-201ENST00000552843 316 ntBASIC1.75□□□□□ -2.13
SKA1Q96BD8 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.75□□□□□ -2.13
SKA1Q96BD8 MIR4255-201ENST00000579351 72 ntBASIC1.75□□□□□ -2.13
SKA1Q96BD8 MIR3618-201ENST00000580330 88 ntBASIC1.75□□□□□ -2.13
SKA1Q96BD8 AC040896.1-201ENST00000613819 479 ntBASIC1.75□□□□□ -2.13
SKA1Q96BD8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
SKA1Q96BD8 Y_RNA.238-201ENST00000364441 102 ntBASIC1.74□□□□□ -2.13
SKA1Q96BD8 RNA5SP363-201ENST00000365072 115 ntBASIC1.74□□□□□ -2.13
SKA1Q96BD8 RNU6-1031P-201ENST00000384773 107 ntBASIC1.74□□□□□ -2.13
SKA1Q96BD8 MIR625-201ENST00000385047 85 ntBASIC1.74□□□□□ -2.13
SKA1Q96BD8 ELOCP21-201ENST00000412558 336 ntBASIC1.74□□□□□ -2.13
SKA1Q96BD8 MTCO3P19-201ENST00000415864 321 ntBASIC1.74□□□□□ -2.13
SKA1Q96BD8 AC010154.1-201ENST00000425857 269 ntBASIC1.74□□□□□ -2.13
SKA1Q96BD8 AC098614.3-201ENST00000438957 440 ntBASIC1.74□□□□□ -2.13
SKA1Q96BD8 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.74□□□□□ -2.13
SKA1Q96BD8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.74□□□□□ -2.13
SKA1Q96BD8 AL442163.3-201ENST00000554110 156 ntBASIC1.74□□□□□ -2.13
SKA1Q96BD8 RPL21P9-201ENST00000556149 474 ntBASIC1.74□□□□□ -2.13
SKA1Q96BD8 AL162424.1-201ENST00000602325 221 ntBASIC1.74□□□□□ -2.13
SKA1Q96BD8 MIR1244-1-201ENST00000612829 85 ntBASIC1.74□□□□□ -2.13
SKA1Q96BD8 MIR1244-3-201ENST00000635744 85 ntBASIC1.74□□□□□ -2.13
SKA1Q96BD8 MIR1244-2-201ENST00000636449 85 ntBASIC1.74□□□□□ -2.13
SKA1Q96BD8 MIR1244-4-202ENST00000636813 85 ntBASIC1.74□□□□□ -2.13
SKA1Q96BD8 Y_RNA.4-201ENST00000362333 112 ntBASIC1.73□□□□□ -2.13
SKA1Q96BD8 Y_RNA.164-201ENST00000363709 102 ntBASIC1.73□□□□□ -2.13
SKA1Q96BD8 RNU6-99P-201ENST00000364721 107 ntBASIC1.73□□□□□ -2.13
SKA1Q96BD8 RNU6-440P-201ENST00000390882 105 ntBASIC1.73□□□□□ -2.13
SKA1Q96BD8 AL034345.1-201ENST00000407768 123 ntBASIC1.73□□□□□ -2.13
SKA1Q96BD8 RNA5SP475-201ENST00000410568 110 ntBASIC1.73□□□□□ -2.13
SKA1Q96BD8 SNX2P2-201ENST00000424553 323 ntBASIC1.73□□□□□ -2.13
SKA1Q96BD8 RNU1-98P-201ENST00000458992 160 ntBASIC1.73□□□□□ -2.13
SKA1Q96BD8 RNU6-625P-201ENST00000459412 107 ntBASIC1.73□□□□□ -2.13
SKA1Q96BD8 SNORA31.10-201ENST00000516482 106 ntBASIC1.73□□□□□ -2.13
SKA1Q96BD8 RNU6-1213P-201ENST00000517075 94 ntBASIC1.73□□□□□ -2.13
SKA1Q96BD8 AP003033.1-201ENST00000527244 415 ntBASIC1.73□□□□□ -2.13
SKA1Q96BD8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.73□□□□□ -2.13
SKA1Q96BD8 MIR8081-201ENST00000611533 95 ntBASIC1.73□□□□□ -2.13
SKA1Q96BD8 AC021506.2-201ENST00000612354 169 ntBASIC1.73□□□□□ -2.13
SKA1Q96BD8 AL357075.2-201ENST00000614906 189 ntBASIC1.73□□□□□ -2.13
SKA1Q96BD8 AC018630.2-201ENST00000534866 2403 ntBASIC1.73□□□□□ -2.13
SKA1Q96BD8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SKA1Q96BD8 RNU6-457P-201ENST00000363999 107 ntBASIC1.72□□□□□ -2.13
SKA1Q96BD8 RNA5SP259-201ENST00000365541 109 ntBASIC1.72□□□□□ -2.13
SKA1Q96BD8 SNORA20B-201ENST00000384220 132 ntBASIC1.72□□□□□ -2.13
SKA1Q96BD8 Y_RNA.577-201ENST00000384794 101 ntBASIC1.72□□□□□ -2.13
SKA1Q96BD8 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.72□□□□□ -2.13
SKA1Q96BD8 RNU4-14P-201ENST00000410858 122 ntBASIC1.72□□□□□ -2.13
SKA1Q96BD8 RNA5SP247-201ENST00000411181 105 ntBASIC1.72□□□□□ -2.13
SKA1Q96BD8 AC092473.1-201ENST00000441098 221 ntBASIC1.72□□□□□ -2.13
SKA1Q96BD8 PGBD4P5-201ENST00000445958 426 ntBASIC1.72□□□□□ -2.13
SKA1Q96BD8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.72□□□□□ -2.13
SKA1Q96BD8 U8.22-201ENST00000459141 133 ntBASIC1.72□□□□□ -2.13
SKA1Q96BD8 AC099513.1-201ENST00000490423 301 ntBASIC1.72□□□□□ -2.13
SKA1Q96BD8 RPS29P11-201ENST00000496507 171 ntBASIC1.72□□□□□ -2.13
SKA1Q96BD8 AC097462.1-201ENST00000514125 324 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms