Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 Y_RNA.777-201ENST00000516982 102 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 RNU6-667P-201ENST00000517186 102 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 RN7SKP40-201ENST00000517211 242 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 MIR4513-201ENST00000581077 86 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.771-201ENST00000598668 102 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 AC006023.1-201ENST00000603944 259 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.789-201ENST00000622480 102 ntBASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.76-201ENST00000362931 109 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.117-201ENST00000363294 101 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.217-201ENST00000364214 105 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 RNU6-200P-201ENST00000364743 107 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 SNORA25B-201ENST00000365507 128 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 RNU6-418P-201ENST00000384035 107 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 SNORD14D-201ENST00000384390 87 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 RNU6-1289P-201ENST00000384431 106 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 MIR196B-201ENST00000384852 84 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.590-201ENST00000410140 107 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 RNU2-61P-201ENST00000411069 191 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 CR769767.1-201ENST00000436337 346 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 Z98949.2-201ENST00000440996 144 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 AL513328.1-201ENST00000446460 224 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 AL109933.2-201ENST00000452651 260 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.641-201ENST00000459414 105 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 AC010531.2-201ENST00000465012 153 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 MIR6817-201ENST00000615588 66 ntBASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.122-201ENST00000363331 96 ntBASIC2.43□□□□□ -2.02
ATG4AQ8WYN0 RNU1-138P-201ENST00000384093 164 ntBASIC2.43□□□□□ -2.02
ATG4AQ8WYN0 RNU6-662P-201ENST00000384253 104 ntBASIC2.43□□□□□ -2.02
ATG4AQ8WYN0 RNU6-710P-201ENST00000410424 105 ntBASIC2.43□□□□□ -2.02
ATG4AQ8WYN0 AL139156.1-201ENST00000412785 841 ntBASIC2.43□□□□□ -2.02
ATG4AQ8WYN0 AC123900.1-201ENST00000420390 96 ntBASIC2.43□□□□□ -2.02
ATG4AQ8WYN0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.43□□□□□ -2.02
ATG4AQ8WYN0 AL357134.1-201ENST00000445848 426 ntBASIC2.43□□□□□ -2.02
ATG4AQ8WYN0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.43□□□□□ -2.02
ATG4AQ8WYN0 RNU6-138P-201ENST00000515952 107 ntBASIC2.43□□□□□ -2.02
ATG4AQ8WYN0 RNA5SP148-201ENST00000516527 94 ntBASIC2.43□□□□□ -2.02
ATG4AQ8WYN0 AC130289.1-201ENST00000577321 73 ntBASIC2.43□□□□□ -2.02
ATG4AQ8WYN0 MIR4282-201ENST00000583613 67 ntBASIC2.43□□□□□ -2.02
ATG4AQ8WYN0 MIR1291-201ENST00000627649 87 ntBASIC2.43□□□□□ -2.02
ATG4AQ8WYN0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 SNORD114-7-201ENST00000362520 77 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.200-201ENST00000364018 102 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 MIR1298-201ENST00000408783 112 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 RNU6-651P-201ENST00000411040 105 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 RPS15AP28-201ENST00000435088 386 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 MTCO1P44-201ENST00000441935 243 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 AC009238.1-201ENST00000442165 424 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 AC009237.6-201ENST00000446969 424 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 SNORD2.1-201ENST00000458762 69 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 RPL23AP94-201ENST00000512518 302 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 SNORA70.12-201ENST00000516084 153 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.679-201ENST00000516416 91 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 RPL12P50-201ENST00000603116 116 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 AL049779.4-201ENST00000604500 156 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 AC025754.2-201ENST00000606491 432 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 AC103810.6-201ENST00000606708 136 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 AC046143.2-201ENST00000609789 160 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 AC013412.1-201ENST00000610687 192 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 AL442067.1-201ENST00000613261 223 ntBASIC2.42□□□□□ -2.02
ATG4AQ8WYN0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 RNU6-1272P-201ENST00000362776 107 ntBASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 RNA5SP393-201ENST00000363423 117 ntBASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 RNA5SP68-201ENST00000363885 119 ntBASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 MIR873-201ENST00000401120 77 ntBASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 AL355796.1-201ENST00000406706 323 ntBASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 AC008134.1-201ENST00000420943 193 ntBASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 Y_RNA.700-201ENST00000516806 100 ntBASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 AC025647.1-201ENST00000517879 253 ntBASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 NDUFA5P6-201ENST00000542110 379 ntBASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
ATG4AQ8WYN0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
ATG4AQ8WYN0 AC016717.2-201ENST00000609089 5141 ntBASIC2.4□□□□□ -2.02
ATG4AQ8WYN0 AL159152.1-201ENST00000635019 2587 ntBASIC2.4□□□□□ -2.02
ATG4AQ8WYN0 SNORD114-30-201ENST00000364448 72 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.274-201ENST00000364714 101 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 SNORA20B-201ENST00000384220 132 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 MT-TR-201ENST00000387439 65 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 RNA5SP184-201ENST00000411071 108 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 RNU2-64P-201ENST00000411315 191 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 SRIP3-201ENST00000413200 219 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 AC016909.1-201ENST00000415916 166 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms