Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MIR4423-201ENST00000580922 80 ntBASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 SNRPGP19-201ENST00000603826 189 ntBASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 AL353149.1-201ENST00000610667 244 ntBASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 AL021879.1-201ENST00000611756 288 ntBASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 MIR3674-201ENST00000636576 68 ntBASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 AC099654.10-201ENST00000640395 161 ntBASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 SNORA63C-201ENST00000364578 129 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 RNU6-450P-201ENST00000364654 107 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 Y_RNA.439-201ENST00000384119 94 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 Y_RNA.462-201ENST00000384268 102 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 Y_RNA.527-201ENST00000384573 102 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 AL079342.1-201ENST00000401460 267 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 MIR1283-2-201ENST00000408621 87 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 RNU2-2P-201ENST00000410396 191 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 RNU6-57P-201ENST00000411348 103 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 AC008134.1-201ENST00000420943 193 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 RNU6-764P-201ENST00000516396 105 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 RNU6-107P-201ENST00000516643 102 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 AC025647.1-201ENST00000517879 253 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 AL353621.2-201ENST00000605340 133 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 U2.15-201ENST00000611544 191 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 PART1_1.1-201ENST00000611761 217 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 U2.16-201ENST00000613119 191 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 U2.12-201ENST00000613778 191 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 U2.20-201ENST00000613956 192 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 U2.9-201ENST00000615427 191 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 AC011476.5-201ENST00000615594 130 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 U2.11-201ENST00000616345 191 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 U2.2-201ENST00000616535 191 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 U2.3-201ENST00000617785 191 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 U2.19-201ENST00000618602 191 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 RNU2-1-201ENST00000618664 191 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 U2.6-201ENST00000619225 191 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 U2.5-201ENST00000619465 191 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 U2.10-201ENST00000620268 191 ntBASIC1.94□□□□□ -2.1
SLC44A1Q8WWI5 RNA5SP432-201ENST00000362480 116 ntBASIC1.93□□□□□ -2.1
SLC44A1Q8WWI5 RNA5SP276-201ENST00000362580 94 ntBASIC1.93□□□□□ -2.1
SLC44A1Q8WWI5 RNU6-23P-201ENST00000363283 107 ntBASIC1.93□□□□□ -2.1
SLC44A1Q8WWI5 RNA5SP493-201ENST00000364115 91 ntBASIC1.93□□□□□ -2.1
SLC44A1Q8WWI5 RNU6-738P-201ENST00000384531 106 ntBASIC1.93□□□□□ -2.1
SLC44A1Q8WWI5 MIR606-201ENST00000384851 96 ntBASIC1.93□□□□□ -2.1
SLC44A1Q8WWI5 RNU6-130P-201ENST00000411112 103 ntBASIC1.93□□□□□ -2.1
SLC44A1Q8WWI5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.93□□□□□ -2.1
SLC44A1Q8WWI5 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
SLC44A1Q8WWI5 AL445646.1-201ENST00000431784 216 ntBASIC1.93□□□□□ -2.1
SLC44A1Q8WWI5 SCARNA15.1-201ENST00000516384 125 ntBASIC1.93□□□□□ -2.1
SLC44A1Q8WWI5 AL590240.4-201ENST00000616908 390 ntBASIC1.93□□□□□ -2.1
SLC44A1Q8WWI5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.93□□□□□ -2.1
SLC44A1Q8WWI5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.93□□□□□ -2.1
SLC44A1Q8WWI5 MIR219B-201ENST00000637023 88 ntBASIC1.93□□□□□ -2.1
SLC44A1Q8WWI5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
SLC44A1Q8WWI5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SLC44A1Q8WWI5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 Y_RNA.153-201ENST00000363615 91 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 Y_RNA.183-201ENST00000363882 113 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 RNU6-20P-201ENST00000384106 107 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 SNORD63-201ENST00000384262 68 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 Y_RNA.570-201ENST00000384750 101 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 MIR504-201ENST00000385065 83 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 MIR1289-2-201ENST00000408360 111 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 RNA5SP475-201ENST00000410568 110 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 AC016909.1-201ENST00000415916 166 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 AL390729.2-201ENST00000416137 156 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 AC060773.1-201ENST00000421698 310 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 BX510359.4-201ENST00000423750 193 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 AC005002.2-201ENST00000438228 269 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 MTND2P29-201ENST00000438595 412 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 SUMO2P18-201ENST00000518873 252 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 MIR4287-201ENST00000579398 78 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 AC005176.2-201ENST00000596933 147 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 RAC1P9-201ENST00000604990 392 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 MIR7843-201ENST00000622274 79 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 AL159152.1-201ENST00000635019 2587 ntBASIC1.92□□□□□ -2.1
SLC44A1Q8WWI5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SLC44A1Q8WWI5 RNU6-626P-201ENST00000363354 107 ntBASIC1.91□□□□□ -2.1
SLC44A1Q8WWI5 Y_RNA.145-201ENST00000363527 102 ntBASIC1.91□□□□□ -2.1
SLC44A1Q8WWI5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC44A1Q8WWI5 SUMO1P2-201ENST00000452524 304 ntBASIC1.91□□□□□ -2.1
SLC44A1Q8WWI5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC44A1Q8WWI5 AC131281.1-201ENST00000522984 164 ntBASIC1.91□□□□□ -2.1
SLC44A1Q8WWI5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC44A1Q8WWI5 AC005786.1-201ENST00000588553 154 ntBASIC1.91□□□□□ -2.1
SLC44A1Q8WWI5 AC005828.6-201ENST00000606610 232 ntBASIC1.91□□□□□ -2.1
SLC44A1Q8WWI5 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
SLC44A1Q8WWI5 AC006435.5-201ENST00000624486 112 ntBASIC1.91□□□□□ -2.1
SLC44A1Q8WWI5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
SLC44A1Q8WWI5 ZNF702P-202ENST00000434269 1966 ntBASIC1.9□□□□□ -2.1
SLC44A1Q8WWI5 SNORD114-1-201ENST00000362705 72 ntBASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 RNU6-1266P-201ENST00000362794 105 ntBASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 Y_RNA.152-201ENST00000363578 100 ntBASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 RNU6-454P-201ENST00000364292 107 ntBASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 RNU6-1240P-201ENST00000365155 104 ntBASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 RNU5A-5P-201ENST00000411054 116 ntBASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 AC113618.1-201ENST00000416747 285 ntBASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 AC096920.1-201ENST00000423991 241 ntBASIC1.9□□□□□ -2.11
SLC44A1Q8WWI5 ATP5J2P3-201ENST00000451550 258 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms