Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC011406.1-201ENST00000512440 370 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 AC105029.1-201ENST00000520250 669 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 AC090617.3-201ENST00000573670 475 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 AC069114.2-201ENST00000604699 304 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 MIR1244-1-201ENST00000612829 85 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 snoZ196.1-201ENST00000625269 89 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 MIR1244-3-201ENST00000635744 85 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 MIR1244-2-201ENST00000636449 85 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 MIR1244-4-202ENST00000636813 85 ntBASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.01□□□□□ -2.25
SHROOM3Q8TF72 AC073544.1-201ENST00000600110 1595 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.88-201ENST00000363029 99 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.142-201ENST00000363491 102 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 RNU5F-3P-201ENST00000363767 117 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 SNORD115-32-201ENST00000364079 82 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.319-201ENST00000365138 92 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.358-201ENST00000365491 99 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 RNU6-767P-201ENST00000384132 107 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 MIR320B2-201ENST00000408479 138 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 RNU4-14P-201ENST00000410858 122 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 NCOR1P3-201ENST00000420479 303 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 MTND4P18-201ENST00000447010 465 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 NDUFB4P10-201ENST00000452541 359 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 RNU7-175P-201ENST00000515915 61 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 RNU6-911P-201ENST00000516523 104 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 SNORA31.17-201ENST00000516953 127 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1□□□□□ -2.25
SHROOM3Q8TF72 APOOP3-201ENST00000536787 586 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 AC233702.2-202ENST00000562547 291 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1□□□□□ -2.25
SHROOM3Q8TF72 5S_rRNA.11-201ENST00000618635 84 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 AC006001.4-201ENST00000622243 395 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 BX322639.1-202ENST00000423987 2213 ntBASIC1□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.72-201ENST00000362894 103 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 SNORD50.1-201ENST00000362987 71 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 RNU6-595P-201ENST00000363944 107 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 RNU6-280P-201ENST00000364145 104 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 RNU1-96P-201ENST00000364163 162 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 SNORD87-201ENST00000364849 89 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 SNORD26-201ENST00000384147 75 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 MIR597-201ENST00000384968 97 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 MIR153-2-201ENST00000385225 87 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 RNU6-57P-201ENST00000411348 103 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AF228730.4-201ENST00000421457 183 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AC096920.1-201ENST00000423991 241 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AC069257.2-201ENST00000441819 155 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AC016717.1-201ENST00000448918 286 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 RNU6-507P-201ENST00000516045 100 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 RNU6-344P-201ENST00000516635 111 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AC108706.1-201ENST00000611053 297 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AL355073.2-201ENST00000612106 557 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 MIR6857-201ENST00000613267 93 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AL359314.1-201ENST00000616913 261 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AC068205.3-201ENST00000636385 468 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AL669831.3-213ENST00000636676 183 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AC099654.14-201ENST00000638599 341 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 RNU6-23P-201ENST00000363283 107 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 RNU6-1305P-201ENST00000364353 104 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 RNU6-1019P-201ENST00000364424 107 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.415-201ENST00000384012 112 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.474-201ENST00000384341 102 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 RNU6-331P-201ENST00000384724 107 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 MIR32-201ENST00000384965 70 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 RNY4P36-201ENST00000391116 96 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AC107032.1-201ENST00000485945 480 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.708-201ENST00000516950 96 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.718-201ENST00000517110 102 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AC093023.1-201ENST00000547375 507 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AC005034.5-201ENST00000604219 466 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AL159152.1-201ENST00000635019 2587 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 AC099654.5-201ENST00000636479 350 ntBASIC0.99□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.259-201ENST00000364619 101 ntBASIC0.98□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.303-201ENST00000364998 94 ntBASIC0.98□□□□□ -2.25
SHROOM3Q8TF72 RNU6-418P-201ENST00000384035 107 ntBASIC0.98□□□□□ -2.25
SHROOM3Q8TF72 SNORA67.2-201ENST00000384300 149 ntBASIC0.98□□□□□ -2.25
SHROOM3Q8TF72 Y_RNA.496-201ENST00000384444 101 ntBASIC0.98□□□□□ -2.25
SHROOM3Q8TF72 MIR676-201ENST00000390702 67 ntBASIC0.98□□□□□ -2.25
SHROOM3Q8TF72 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SHROOM3Q8TF72 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.98□□□□□ -2.25
SHROOM3Q8TF72 AC074290.1-201ENST00000448883 135 ntBASIC0.98□□□□□ -2.25
SHROOM3Q8TF72 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.98□□□□□ -2.25
SHROOM3Q8TF72 AC074133.1-201ENST00000515696 183 ntBASIC0.98□□□□□ -2.25
SHROOM3Q8TF72 RNU6-1114P-201ENST00000516022 107 ntBASIC0.98□□□□□ -2.25
SHROOM3Q8TF72 RNU6-875P-201ENST00000516488 106 ntBASIC0.98□□□□□ -2.25
SHROOM3Q8TF72 MIR5695-201ENST00000579717 85 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms