Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 FER-210ENST00000628534 558 ntTSL 5 BASIC0.04□□□□□ -2.4
SYNE1Q8NF91 MIR6079-201ENST00000635807 62 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RNU6-199P-201ENST00000362954 107 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RNU6-266P-201ENST00000364225 107 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 MT-TQ-201ENST00000387372 72 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 SNORD57-201ENST00000448188 72 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AC025465.4-201ENST00000513422 638 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AP003461.1-201ENST00000528866 78 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AC023442.1-201ENST00000531247 422 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AC104260.1-201ENST00000616660 539 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 SEPT14P17-201ENST00000617978 177 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 U6.73-201ENST00000619194 103 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AP002371.2-201ENST00000624450 503 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RNU6-1297P-201ENST00000384415 104 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 MT-TH-201ENST00000387441 69 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 Y_RNA.583-201ENST00000391033 113 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.04□□□□□ -2.4
SYNE1Q8NF91 MTATP6P23-201ENST00000440153 476 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 TPTE2P5-203ENST00000458118 728 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AC104136.1-201ENST00000512969 394 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 SNORA19.3-201ENST00000516165 130 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 DEFB131C-201ENST00000528817 165 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 MTND4P33-201ENST00000556706 766 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AC064836.2-201ENST00000609491 462 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RNU5A-2P-201ENST00000384337 116 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RNU6-1184P-201ENST00000384588 108 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RNA5SP496-201ENST00000391240 109 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 MIR208B-201ENST00000401172 77 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RPS3AP3-201ENST00000411933 242 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AL365184.2-201ENST00000431139 435 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RNU7-14P-201ENST00000459331 62 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.04□□□□□ -2.4
SYNE1Q8NF91 SNORD111.1-201ENST00000516421 86 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RNU6-410P-201ENST00000517006 107 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.04□□□□□ -2.4
SYNE1Q8NF91 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.04□□□□□ -2.4
SYNE1Q8NF91 SNORD98-201ENST00000636377 67 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 MTND4P9-201ENST00000507819 1346 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RNU6-1287P-201ENST00000362914 107 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RNU6-1060P-201ENST00000384664 107 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AL355796.1-201ENST00000406706 323 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 MIR1827-201ENST00000408549 66 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 U7.7-201ENST00000459276 60 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 SNORD126-201ENST00000459475 77 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RNU2-12P-201ENST00000517216 168 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AC022616.6-201ENST00000520479 119 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 MTND4LP18-201ENST00000526864 291 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AP003716.2-201ENST00000528260 108 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AC090517.1-201ENST00000569307 266 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 CPDP1-201ENST00000579660 283 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AC078938.1-201ENST00000620993 318 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 SNORD114-9-201ENST00000364370 72 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 Y_RNA.267-201ENST00000364679 109 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 SNORA2B-201ENST00000384583 137 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RNA5SP219-201ENST00000390940 113 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 MIR1302-7-201ENST00000408841 72 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AC018710.1-201ENST00000506509 158 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AP002004.2-201ENST00000531656 154 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.04□□□□□ -2.4
SYNE1Q8NF91 MIR4764-201ENST00000580680 88 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RNU6-161P-201ENST00000363051 106 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC106883.1-201ENST00000418805 562 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.03□□□□□ -2.4
SYNE1Q8NF91 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC092423.1-201ENST00000430165 186 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.03□□□□□ -2.4
SYNE1Q8NF91 MRPS10P1-201ENST00000448483 130 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC022868.1-201ENST00000517767 391 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RNU6-323P-201ENST00000521915 107 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC027419.1-201ENST00000522976 328 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AL358944.1-201ENST00000528537 144 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC022523.2-201ENST00000561045 150 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 MIR5692C1-201ENST00000585309 91 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AL391834.2-201ENST00000609982 546 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 MIR371B-201ENST00000638082 66 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.03□□□□□ -2.4
SYNE1Q8NF91 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC090625.1-201ENST00000357130 210 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RNU6-384P-201ENST00000364900 104 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RNU6-169P-201ENST00000365336 107 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RNU2-29P-201ENST00000410423 189 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RNU5A-5P-201ENST00000411054 116 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RPS26P5-201ENST00000418544 335 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 SNRPGP14-201ENST00000435400 219 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RNU7-182P-201ENST00000459009 62 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC098869.1-201ENST00000481627 292 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 OR9P1P-201ENST00000496431 281 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 LARP7P1-201ENST00000605576 316 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 uc_338.16-201ENST00000621804 95 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RNU6-674P-201ENST00000363831 107 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 Y_RNA.410-201ENST00000383992 113 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms