Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 HMGN2P18-201ENST00000450680 270 ntBASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 RN7SKP40-201ENST00000517211 242 ntBASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 AC004486.1-201ENST00000546846 233 ntBASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 AC008749.1-201ENST00000597650 306 ntBASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 AC127459.3-201ENST00000624328 466 ntBASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 Y_RNA.16-201ENST00000362421 102 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 Y_RNA.122-201ENST00000363331 96 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 RNU6-326P-201ENST00000365480 107 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 RNU6-514P-201ENST00000384208 107 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 Y_RNA.478-201ENST00000384358 107 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 Y_RNA.562-201ENST00000384695 113 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 MIR181A2-201ENST00000384863 110 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 AC139712.2-201ENST00000424302 339 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 AC016925.1-201ENST00000458303 298 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 RNU7-57P-201ENST00000459540 60 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 RNU2-31P-201ENST00000516954 155 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 AP002001.1-203ENST00000534002 267 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 MIR3670-2-201ENST00000582974 65 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 MIR3670-1-201ENST00000584160 65 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 MIR3670-3-201ENST00000584855 65 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 AC012433.1-201ENST00000588916 398 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 MIR3670-4-201ENST00000612260 65 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 U4atac.1-201ENST00000618345 95 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.93□□□□□ -1.94
SMC1BQ8NDV3 AC009487.4-201ENST00000624969 3585 ntBASIC2.92□□□□□ -1.94
SMC1BQ8NDV3 AC009238.1-201ENST00000442165 424 ntBASIC2.92□□□□□ -1.94
SMC1BQ8NDV3 AC009237.6-201ENST00000446969 424 ntBASIC2.92□□□□□ -1.94
SMC1BQ8NDV3 AC011753.1-201ENST00000451001 220 ntBASIC2.92□□□□□ -1.94
SMC1BQ8NDV3 AL137159.1-201ENST00000452808 512 ntBASIC2.92□□□□□ -1.94
SMC1BQ8NDV3 RN7SL297P-201ENST00000483161 293 ntBASIC2.92□□□□□ -1.94
SMC1BQ8NDV3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.92□□□□□ -1.94
SMC1BQ8NDV3 SERF1AP1-201ENST00000514575 187 ntBASIC2.92□□□□□ -1.94
SMC1BQ8NDV3 SCARNA24.2-201ENST00000516968 130 ntBASIC2.92□□□□□ -1.94
SMC1BQ8NDV3 MIR3684-201ENST00000579779 74 ntBASIC2.92□□□□□ -1.94
SMC1BQ8NDV3 AC103810.6-201ENST00000606708 136 ntBASIC2.92□□□□□ -1.94
SMC1BQ8NDV3 snoU13.31-201ENST00000607291 104 ntBASIC2.92□□□□□ -1.94
SMC1BQ8NDV3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SMC1BQ8NDV3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
SMC1BQ8NDV3 SNORA25.1-201ENST00000362326 128 ntBASIC2.91□□□□□ -1.94
SMC1BQ8NDV3 Y_RNA.116-201ENST00000363292 103 ntBASIC2.91□□□□□ -1.94
SMC1BQ8NDV3 Y_RNA.383-201ENST00000383855 97 ntBASIC2.91□□□□□ -1.94
SMC1BQ8NDV3 RNU6-975P-201ENST00000384296 105 ntBASIC2.91□□□□□ -1.94
SMC1BQ8NDV3 MIR1185-2-201ENST00000408687 86 ntBASIC2.91□□□□□ -1.94
SMC1BQ8NDV3 RNU6-948P-201ENST00000516374 107 ntBASIC2.91□□□□□ -1.94
SMC1BQ8NDV3 RNU6-667P-201ENST00000517186 102 ntBASIC2.91□□□□□ -1.94
SMC1BQ8NDV3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.91□□□□□ -1.94
SMC1BQ8NDV3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.91□□□□□ -1.94
SMC1BQ8NDV3 snoZ196.1-201ENST00000625269 89 ntBASIC2.91□□□□□ -1.94
SMC1BQ8NDV3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
SMC1BQ8NDV3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
SMC1BQ8NDV3 SNORA20.1-201ENST00000364790 130 ntBASIC2.9□□□□□ -1.95
SMC1BQ8NDV3 Y_RNA.352-201ENST00000365439 102 ntBASIC2.9□□□□□ -1.95
SMC1BQ8NDV3 SNORA25B-201ENST00000365507 128 ntBASIC2.9□□□□□ -1.95
SMC1BQ8NDV3 SNORA80E-201ENST00000384744 137 ntBASIC2.9□□□□□ -1.95
SMC1BQ8NDV3 RPL23AP3-201ENST00000453844 468 ntBASIC2.9□□□□□ -1.95
SMC1BQ8NDV3 RNU2-34P-201ENST00000516534 121 ntBASIC2.9□□□□□ -1.95
SMC1BQ8NDV3 RNU2-12P-201ENST00000517216 168 ntBASIC2.9□□□□□ -1.95
SMC1BQ8NDV3 MIR3128-201ENST00000581957 66 ntBASIC2.9□□□□□ -1.95
SMC1BQ8NDV3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SMC1BQ8NDV3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 RNU6-324P-201ENST00000363957 106 ntBASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 RNU6-454P-201ENST00000364292 107 ntBASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 Y_RNA.416-201ENST00000384014 113 ntBASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 Y_RNA.477-201ENST00000384352 108 ntBASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 MIR7-2-201ENST00000384970 110 ntBASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 U8.13-201ENST00000390842 128 ntBASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 RNU6-847P-201ENST00000411115 108 ntBASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 AC024067.1-201ENST00000426199 223 ntBASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 SUMO1P2-201ENST00000452524 304 ntBASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 RNU6-1023P-201ENST00000516137 106 ntBASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 MIR8070-201ENST00000616510 88 ntBASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 AC135776.4-201ENST00000624300 1904 ntBASIC2.89□□□□□ -1.95
SMC1BQ8NDV3 RNU6-1266P-201ENST00000362794 105 ntBASIC2.88□□□□□ -1.95
SMC1BQ8NDV3 Y_RNA.136-201ENST00000363444 102 ntBASIC2.88□□□□□ -1.95
SMC1BQ8NDV3 RNU6-1199P-201ENST00000411249 104 ntBASIC2.88□□□□□ -1.95
SMC1BQ8NDV3 RNU6-57P-201ENST00000411348 103 ntBASIC2.88□□□□□ -1.95
SMC1BQ8NDV3 AC123900.1-201ENST00000420390 96 ntBASIC2.88□□□□□ -1.95
SMC1BQ8NDV3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.88□□□□□ -1.95
SMC1BQ8NDV3 snoU13.18-201ENST00000459483 104 ntBASIC2.88□□□□□ -1.95
SMC1BQ8NDV3 AC093259.1-201ENST00000509755 300 ntBASIC2.88□□□□□ -1.95
SMC1BQ8NDV3 SNORA9.3-201ENST00000516383 129 ntBASIC2.88□□□□□ -1.95
SMC1BQ8NDV3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.88□□□□□ -1.95
SMC1BQ8NDV3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 RNU6-379P-201ENST00000363813 104 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms