Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC107393.1-201ENST00000512403 346 ntBASIC2.52□□□□□ -2.01
KRT28Q7Z3Y7 Y_RNA.713-201ENST00000517013 96 ntBASIC2.52□□□□□ -2.01
KRT28Q7Z3Y7 CYCSP26-201ENST00000534107 320 ntBASIC2.52□□□□□ -2.01
KRT28Q7Z3Y7 AC018448.1-201ENST00000552843 316 ntBASIC2.52□□□□□ -2.01
KRT28Q7Z3Y7 AL137847.3-201ENST00000611521 109 ntBASIC2.52□□□□□ -2.01
KRT28Q7Z3Y7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
KRT28Q7Z3Y7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
KRT28Q7Z3Y7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
KRT28Q7Z3Y7 MIR586-201ENST00000385035 97 ntBASIC2.51□□□□□ -2.01
KRT28Q7Z3Y7 RNU6-130P-201ENST00000411112 103 ntBASIC2.51□□□□□ -2.01
KRT28Q7Z3Y7 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.51□□□□□ -2.01
KRT28Q7Z3Y7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.51□□□□□ -2.01
KRT28Q7Z3Y7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.51□□□□□ -2.01
KRT28Q7Z3Y7 RNU6-1046P-201ENST00000516538 107 ntBASIC2.51□□□□□ -2.01
KRT28Q7Z3Y7 AC131281.1-201ENST00000522984 164 ntBASIC2.51□□□□□ -2.01
KRT28Q7Z3Y7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.51□□□□□ -2.01
KRT28Q7Z3Y7 PRELID2P1-201ENST00000552837 301 ntBASIC2.51□□□□□ -2.01
KRT28Q7Z3Y7 AL117187.1-201ENST00000555482 181 ntBASIC2.51□□□□□ -2.01
KRT28Q7Z3Y7 AC026271.5-201ENST00000577873 130 ntBASIC2.51□□□□□ -2.01
KRT28Q7Z3Y7 SNORA4-201ENST00000584302 138 ntBASIC2.51□□□□□ -2.01
KRT28Q7Z3Y7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.51□□□□□ -2.01
KRT28Q7Z3Y7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
KRT28Q7Z3Y7 Y_RNA.133-201ENST00000363428 110 ntBASIC2.5□□□□□ -2.01
KRT28Q7Z3Y7 Y_RNA.210-201ENST00000364161 110 ntBASIC2.5□□□□□ -2.01
KRT28Q7Z3Y7 RNA5SP160-201ENST00000364866 120 ntBASIC2.5□□□□□ -2.01
KRT28Q7Z3Y7 SNORA67.5-201ENST00000391036 107 ntBASIC2.5□□□□□ -2.01
KRT28Q7Z3Y7 RPL21P1-201ENST00000399532 476 ntBASIC2.5□□□□□ -2.01
KRT28Q7Z3Y7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.5□□□□□ -2.01
KRT28Q7Z3Y7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.5□□□□□ -2.01
KRT28Q7Z3Y7 HMGN2P9-201ENST00000476875 229 ntBASIC2.5□□□□□ -2.01
KRT28Q7Z3Y7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.5□□□□□ -2.01
KRT28Q7Z3Y7 SNORA40.15-201ENST00000516884 107 ntBASIC2.5□□□□□ -2.01
KRT28Q7Z3Y7 AK6P2-201ENST00000549020 471 ntBASIC2.5□□□□□ -2.01
KRT28Q7Z3Y7 AC233702.2-202ENST00000562547 291 ntBASIC2.5□□□□□ -2.01
KRT28Q7Z3Y7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
KRT28Q7Z3Y7 MIR410-201ENST00000362222 80 ntBASIC2.49□□□□□ -2.01
KRT28Q7Z3Y7 U3.8-201ENST00000363675 217 ntBASIC2.49□□□□□ -2.01
KRT28Q7Z3Y7 SNORA72.2-201ENST00000365028 127 ntBASIC2.49□□□□□ -2.01
KRT28Q7Z3Y7 Y_RNA.540-201ENST00000384638 111 ntBASIC2.49□□□□□ -2.01
KRT28Q7Z3Y7 MIR524-201ENST00000385242 87 ntBASIC2.49□□□□□ -2.01
KRT28Q7Z3Y7 RNA5SP475-201ENST00000410568 110 ntBASIC2.49□□□□□ -2.01
KRT28Q7Z3Y7 SRIP3-201ENST00000413200 219 ntBASIC2.49□□□□□ -2.01
KRT28Q7Z3Y7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.49□□□□□ -2.01
KRT28Q7Z3Y7 AC123900.1-201ENST00000420390 96 ntBASIC2.49□□□□□ -2.01
KRT28Q7Z3Y7 NDUFB4P10-201ENST00000452541 359 ntBASIC2.49□□□□□ -2.01
KRT28Q7Z3Y7 AC016925.1-201ENST00000458303 298 ntBASIC2.49□□□□□ -2.01
KRT28Q7Z3Y7 RNU7-57P-201ENST00000459540 60 ntBASIC2.49□□□□□ -2.01
KRT28Q7Z3Y7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.49□□□□□ -2.01
KRT28Q7Z3Y7 DNAJC19P9-201ENST00000555084 351 ntBASIC2.49□□□□□ -2.01
KRT28Q7Z3Y7 RAC1P9-201ENST00000604990 392 ntBASIC2.49□□□□□ -2.01
KRT28Q7Z3Y7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.49□□□□□ -2.01
KRT28Q7Z3Y7 AC245060.5-201ENST00000610778 3293 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 RNU6-626P-201ENST00000363354 107 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 Y_RNA.143-201ENST00000363520 106 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 RNU6-418P-201ENST00000384035 107 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 RNU6-1310P-201ENST00000384153 107 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 RNU6-1105P-201ENST00000384774 107 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 MIR548B-201ENST00000385247 97 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 ELOCP21-201ENST00000412558 336 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 EDDM3CP-201ENST00000415977 425 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 AC245102.2-201ENST00000448956 180 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 MRPS35P2-201ENST00000508242 191 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 RNY3P15-201ENST00000516297 97 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 RNU6-948P-201ENST00000516374 107 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 IGLV3-17-201ENST00000519099 244 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 MIR4255-201ENST00000579351 72 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 MIR4423-201ENST00000580922 80 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 PRR13P7-201ENST00000605538 430 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
KRT28Q7Z3Y7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
KRT28Q7Z3Y7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
KRT28Q7Z3Y7 SNORD115-3-201ENST00000363100 82 ntBASIC2.47□□□□□ -2.01
KRT28Q7Z3Y7 RNU6-961P-201ENST00000363893 105 ntBASIC2.47□□□□□ -2.01
KRT28Q7Z3Y7 RNU6-1264P-201ENST00000383891 107 ntBASIC2.47□□□□□ -2.01
KRT28Q7Z3Y7 RNU6-20P-201ENST00000384106 107 ntBASIC2.47□□□□□ -2.01
KRT28Q7Z3Y7 RNU1-148P-201ENST00000384472 162 ntBASIC2.47□□□□□ -2.01
KRT28Q7Z3Y7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.47□□□□□ -2.01
KRT28Q7Z3Y7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.47□□□□□ -2.01
KRT28Q7Z3Y7 RAB28P5-201ENST00000427490 651 ntBASIC2.47□□□□□ -2.01
KRT28Q7Z3Y7 AC016717.1-201ENST00000448918 286 ntBASIC2.47□□□□□ -2.01
KRT28Q7Z3Y7 MTATP8P1-201ENST00000467115 207 ntBASIC2.47□□□□□ -2.01
KRT28Q7Z3Y7 RNU6-897P-201ENST00000517135 105 ntBASIC2.47□□□□□ -2.01
KRT28Q7Z3Y7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.47□□□□□ -2.01
KRT28Q7Z3Y7 AL162730.1-201ENST00000605734 292 ntBASIC2.47□□□□□ -2.01
KRT28Q7Z3Y7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.46□□□□□ -2.02
KRT28Q7Z3Y7 Y_RNA.332-201ENST00000365271 113 ntBASIC2.46□□□□□ -2.02
KRT28Q7Z3Y7 RNU6-975P-201ENST00000384296 105 ntBASIC2.46□□□□□ -2.02
KRT28Q7Z3Y7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
KRT28Q7Z3Y7 RNU6-57P-201ENST00000411348 103 ntBASIC2.46□□□□□ -2.02
KRT28Q7Z3Y7 AC139712.2-201ENST00000424302 339 ntBASIC2.46□□□□□ -2.02
KRT28Q7Z3Y7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.46□□□□□ -2.02
KRT28Q7Z3Y7 AL021397.1-201ENST00000451806 248 ntBASIC2.46□□□□□ -2.02
KRT28Q7Z3Y7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.46□□□□□ -2.02
KRT28Q7Z3Y7 AL139109.1-201ENST00000455491 297 ntBASIC2.46□□□□□ -2.02
KRT28Q7Z3Y7 RNU7-95P-201ENST00000459222 64 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms