Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC009831.4-201ENST00000620744 325 ntBASIC2.75□□□□□ -1.97
UBE3BQ7Z3V4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
UBE3BQ7Z3V4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.65-201ENST00000362846 100 ntBASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.269-201ENST00000364685 89 ntBASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.275-201ENST00000364726 110 ntBASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 SNORA11.4-201ENST00000408823 129 ntBASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 AL139156.1-201ENST00000412785 841 ntBASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 AC091959.1-201ENST00000495857 238 ntBASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 RNU6-138P-201ENST00000515952 107 ntBASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 RNU6-155P-201ENST00000516347 100 ntBASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 RNU5F-4P-201ENST00000516581 114 ntBASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 RNU6-107P-201ENST00000516643 102 ntBASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 SNORA27.4-201ENST00000516650 95 ntBASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 MIR3616-201ENST00000584070 92 ntBASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
UBE3BQ7Z3V4 RNU6-740P-201ENST00000364734 105 ntBASIC2.73□□□□□ -1.97
UBE3BQ7Z3V4 RNU6-234P-201ENST00000365229 104 ntBASIC2.73□□□□□ -1.97
UBE3BQ7Z3V4 MIR548B-201ENST00000385247 97 ntBASIC2.73□□□□□ -1.97
UBE3BQ7Z3V4 MIR300-201ENST00000401138 83 ntBASIC2.73□□□□□ -1.97
UBE3BQ7Z3V4 AC009310.1-201ENST00000414414 451 ntBASIC2.73□□□□□ -1.97
UBE3BQ7Z3V4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.73□□□□□ -1.97
UBE3BQ7Z3V4 AC090515.1-201ENST00000465295 476 ntBASIC2.73□□□□□ -1.97
UBE3BQ7Z3V4 HMGN2P9-201ENST00000476875 229 ntBASIC2.73□□□□□ -1.97
UBE3BQ7Z3V4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.73□□□□□ -1.97
UBE3BQ7Z3V4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.73□□□□□ -1.97
UBE3BQ7Z3V4 MIR4282-201ENST00000583613 67 ntBASIC2.73□□□□□ -1.97
UBE3BQ7Z3V4 AC006380.1-201ENST00000603598 186 ntBASIC2.73□□□□□ -1.97
UBE3BQ7Z3V4 AL356280.1-201ENST00000603614 379 ntBASIC2.73□□□□□ -1.97
UBE3BQ7Z3V4 MIR5739-201ENST00000619803 80 ntBASIC2.73□□□□□ -1.97
UBE3BQ7Z3V4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
UBE3BQ7Z3V4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.82-201ENST00000363000 102 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.92-201ENST00000363043 102 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.235-201ENST00000364412 102 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.243-201ENST00000364481 109 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.306-201ENST00000365015 102 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.312-201ENST00000365089 102 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.322-201ENST00000365151 102 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 RNU6-514P-201ENST00000384208 107 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.785-201ENST00000384290 109 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.650-201ENST00000459002 102 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 AC023141.11-201ENST00000508864 202 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 RNA5SP200-201ENST00000516360 103 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.777-201ENST00000516982 102 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 AC130289.1-201ENST00000577321 73 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 AC104984.5-201ENST00000586878 94 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.771-201ENST00000598668 102 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 AL162424.1-201ENST00000602325 221 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 Y_RNA.789-201ENST00000622480 102 ntBASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.72□□□□□ -1.97
UBE3BQ7Z3V4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.71□□□□□ -1.97
UBE3BQ7Z3V4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
UBE3BQ7Z3V4 Y_RNA.76-201ENST00000362931 109 ntBASIC2.71□□□□□ -1.98
UBE3BQ7Z3V4 RNU6-1305P-201ENST00000364353 104 ntBASIC2.71□□□□□ -1.98
UBE3BQ7Z3V4 Y_RNA.361-201ENST00000365515 120 ntBASIC2.71□□□□□ -1.98
UBE3BQ7Z3V4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
UBE3BQ7Z3V4 MIR1283-1-201ENST00000408494 87 ntBASIC2.71□□□□□ -1.98
UBE3BQ7Z3V4 RNU7-14P-201ENST00000459331 62 ntBASIC2.71□□□□□ -1.98
UBE3BQ7Z3V4 MIR449C-201ENST00000516047 92 ntBASIC2.71□□□□□ -1.98
UBE3BQ7Z3V4 RNU6-436P-201ENST00000516171 114 ntBASIC2.71□□□□□ -1.98
UBE3BQ7Z3V4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.71□□□□□ -1.98
UBE3BQ7Z3V4 RPL21P9-201ENST00000556149 474 ntBASIC2.71□□□□□ -1.98
UBE3BQ7Z3V4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.71□□□□□ -1.98
UBE3BQ7Z3V4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
UBE3BQ7Z3V4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
UBE3BQ7Z3V4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 Y_RNA.122-201ENST00000363331 96 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 Y_RNA.200-201ENST00000364018 102 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 SNORD115-30-201ENST00000364117 82 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 Y_RNA.217-201ENST00000364214 105 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 SNORD31B-201ENST00000364977 69 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 RNU1-138P-201ENST00000384093 164 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 MIR1185-2-201ENST00000408687 86 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 U3.40-201ENST00000408706 208 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 AL161788.1-201ENST00000441805 169 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 CYP2C59P-201ENST00000457790 269 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 SNORD2.1-201ENST00000458762 69 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 Y_RNA.641-201ENST00000459414 105 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 COX6CP14-201ENST00000469580 174 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 ATP5EP1-201ENST00000510257 156 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 RNU6-191P-201ENST00000516295 94 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 SNORA31.11-201ENST00000516528 139 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 SNORA48.11-201ENST00000517015 89 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 AC005828.6-201ENST00000606610 232 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 MIR6132-201ENST00000622083 109 ntBASIC2.7□□□□□ -1.98
UBE3BQ7Z3V4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 324.2 ms