Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 MTCO3P19-201ENST00000415864 321 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.45□□□□□ -2.18
ZNF544Q6NX49 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.45□□□□□ -2.18
ZNF544Q6NX49 MTCO2P12-201ENST00000427426 682 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 MTND4P19-201ENST00000446659 478 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 AC112492.4-201ENST00000456549 352 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 AC093852.1-201ENST00000503587 266 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.45□□□□□ -2.18
ZNF544Q6NX49 RNU6-1012P-201ENST00000516606 109 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 Y_RNA.711-201ENST00000516993 102 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 RN7SKP295-201ENST00000517264 153 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.45□□□□□ -2.18
ZNF544Q6NX49 MIR3169-201ENST00000578032 83 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.45□□□□□ -2.18
ZNF544Q6NX49 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.45□□□□□ -2.18
ZNF544Q6NX49 AL078596.1-201ENST00000624856 447 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
ZNF544Q6NX49 Y_RNA.31-201ENST00000362574 102 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 SNORD115-3-201ENST00000363100 82 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 Y_RNA.132-201ENST00000363421 102 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 Y_RNA.148-201ENST00000363557 117 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 RNA5SP493-201ENST00000364115 91 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 RNY3P11-201ENST00000364153 102 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 RNU6-879P-201ENST00000364328 108 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 RNU6-1305P-201ENST00000364353 104 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
ZNF544Q6NX49 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
ZNF544Q6NX49 AL033519.2-201ENST00000403958 392 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 MIR1302-11-201ENST00000408051 138 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 MIR1302-9-201ENST00000408365 138 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 MIR1185-2-201ENST00000408687 86 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 MIR1302-10-201ENST00000408734 138 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 Y_RNA.595-201ENST00000410403 105 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 Y_RNA.605-201ENST00000410577 105 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 RN7SKP101-201ENST00000411376 320 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 ELOCP21-201ENST00000412558 336 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 AC139712.2-201ENST00000424302 339 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 MTND2P29-201ENST00000438595 412 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 AC074290.1-201ENST00000448883 135 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 RNU6-221P-201ENST00000459541 99 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 RPL26P26-201ENST00000480251 434 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 Y_RNA.661-201ENST00000516003 99 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 RNU6-948P-201ENST00000516374 107 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.44□□□□□ -2.18
ZNF544Q6NX49 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.44□□□□□ -2.18
ZNF544Q6NX49 AC006600.1-201ENST00000572529 153 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 MIR5188-201ENST00000583467 113 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 MIR1302-2-201ENST00000607096 138 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 AL353149.1-201ENST00000610667 244 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 AL357075.2-201ENST00000614906 189 ntBASIC1.44□□□□□ -2.18
ZNF544Q6NX49 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
ZNF544Q6NX49 MIR548B-201ENST00000385247 97 ntBASIC1.43□□□□□ -2.18
ZNF544Q6NX49 MRPL35P1-201ENST00000404272 572 ntBASIC1.43□□□□□ -2.18
ZNF544Q6NX49 SNORD12B-201ENST00000410433 91 ntBASIC1.43□□□□□ -2.18
ZNF544Q6NX49 BX510359.4-201ENST00000423750 193 ntBASIC1.43□□□□□ -2.18
ZNF544Q6NX49 MTND1P14-201ENST00000427400 950 ntBASIC1.43□□□□□ -2.18
ZNF544Q6NX49 AC108667.1-201ENST00000428618 249 ntBASIC1.43□□□□□ -2.18
ZNF544Q6NX49 TOMM22P2-201ENST00000430735 237 ntBASIC1.43□□□□□ -2.18
ZNF544Q6NX49 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.43□□□□□ -2.18
ZNF544Q6NX49 PCNPP5-201ENST00000452246 481 ntBASIC1.43□□□□□ -2.18
ZNF544Q6NX49 SNORA40.9-201ENST00000515895 93 ntBASIC1.43□□□□□ -2.18
ZNF544Q6NX49 SNORA25.10-201ENST00000515926 124 ntBASIC1.43□□□□□ -2.18
ZNF544Q6NX49 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.43□□□□□ -2.18
ZNF544Q6NX49 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.43□□□□□ -2.18
ZNF544Q6NX49 MIR4713-201ENST00000582691 75 ntBASIC1.43□□□□□ -2.18
ZNF544Q6NX49 MIR3171-201ENST00000584270 74 ntBASIC1.43□□□□□ -2.18
ZNF544Q6NX49 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.43□□□□□ -2.18
ZNF544Q6NX49 AC103810.8-201ENST00000607347 118 ntBASIC1.43□□□□□ -2.18
ZNF544Q6NX49 AC010205.1-201ENST00000616668 449 ntBASIC1.43□□□□□ -2.18
ZNF544Q6NX49 AC007485.1-201ENST00000616755 206 ntBASIC1.43□□□□□ -2.18
ZNF544Q6NX49 AC022513.1-201ENST00000624512 117 ntBASIC1.43□□□□□ -2.18
ZNF544Q6NX49 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.43□□□□□ -2.18
ZNF544Q6NX49 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.43□□□□□ -2.18
ZNF544Q6NX49 RNU6-727P-201ENST00000363592 107 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 SNORD87-201ENST00000364849 89 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 Y_RNA.338-201ENST00000365320 114 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 RNU6-1264P-201ENST00000383891 107 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 RNU6-418P-201ENST00000384035 107 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 Y_RNA.526-201ENST00000384572 110 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 MIR628-201ENST00000385229 95 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 SNORD78.2-201ENST00000391076 69 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
ZNF544Q6NX49 SDAD1P3-201ENST00000427380 333 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 AC096644.2-201ENST00000429278 159 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 AL160004.2-201ENST00000432935 350 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 RNU7-169P-201ENST00000459456 61 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 RNU7-57P-201ENST00000459540 60 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 RNU1-117P-201ENST00000517041 158 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 AC018448.1-201ENST00000552843 316 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 AC006157.1-201ENST00000611750 366 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 AC083806.3-201ENST00000614016 455 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 AL590240.4-201ENST00000616908 390 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 AC130454.1-201ENST00000622948 401 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 snoZ196.1-201ENST00000625269 89 ntBASIC1.42□□□□□ -2.18
ZNF544Q6NX49 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms