Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 AC005534.2-201ENST00000431047 433 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 MTCYBP6-201ENST00000441810 138 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 U8.20-201ENST00000459445 131 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 AL163540.1-201ENST00000485382 386 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 RN7SL274P-201ENST00000492268 272 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.721-201ENST00000517207 102 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 AC022616.4-201ENST00000522985 181 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 AC022254.1-201ENST00000567857 235 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 MIR3171-201ENST00000584270 74 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 AC044792.1-201ENST00000593294 196 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 AC005176.2-201ENST00000596933 147 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 AL359075.3-201ENST00000613288 217 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 AC004467.1-201ENST00000615678 330 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 U6.73-201ENST00000619194 103 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 U6.115-201ENST00000636045 103 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 MIR219B-201ENST00000637023 88 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 AC010615.1-201ENST00000594254 1764 ntBASIC1.84□□□□□ -2.12
LRIF1Q5T3J3 ZNF355P-201ENST00000427301 3216 ntBASIC1.84□□□□□ -2.12
LRIF1Q5T3J3 RNU6-1227P-201ENST00000383981 107 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 RNU6-20P-201ENST00000384106 107 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 Y_RNA.462-201ENST00000384268 102 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 MIR520A-201ENST00000384862 85 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 RNU2-2P-201ENST00000410396 191 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 EBAG9P1-201ENST00000418955 543 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 AL445646.1-201ENST00000431784 216 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 AC245047.4-201ENST00000433189 144 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 RNA5SP57-201ENST00000459463 123 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 MRPS17P9-201ENST00000511924 393 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 RNU1-142P-201ENST00000516682 145 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 RNU2-12P-201ENST00000517216 168 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 AC084364.2-201ENST00000546924 395 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 MIR4713-201ENST00000582691 75 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 AC006380.1-201ENST00000603598 186 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 AC011476.5-201ENST00000615594 130 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 uc_338.20-201ENST00000621563 178 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 IGHVIII-44-202ENST00000636235 289 ntBASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.83□□□□□ -2.12
LRIF1Q5T3J3 Y_RNA.202-201ENST00000364083 110 ntBASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 SNORA63D-201ENST00000364359 132 ntBASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 SNORA22B-201ENST00000383876 138 ntBASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 SNORA20B-201ENST00000384220 132 ntBASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 RNU6-296P-201ENST00000384608 107 ntBASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 Y_RNA.551-201ENST00000384661 102 ntBASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 SNORA64-201ENST00000384674 134 ntBASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 MRPL42P3-201ENST00000401492 326 ntBASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 AL355796.1-201ENST00000406706 323 ntBASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 RNU2-54P-201ENST00000410299 190 ntBASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 AL390729.2-201ENST00000416137 156 ntBASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 MIR1273D-201ENST00000577266 86 ntBASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 AL096840.1-201ENST00000603287 93 ntBASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 AC116312.1-201ENST00000606841 314 ntBASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 AC091932.3-201ENST00000624223 323 ntBASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.82□□□□□ -2.12
LRIF1Q5T3J3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 Y_RNA.439-201ENST00000384119 94 ntBASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 RNA5SP323-201ENST00000391094 133 ntBASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 RNU11-5P-201ENST00000391216 129 ntBASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 Y_RNA.645-201ENST00000391229 102 ntBASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 RNA5SP467-201ENST00000391274 118 ntBASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 RNA5SP425-201ENST00000410336 112 ntBASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 RNU5A-5P-201ENST00000411054 116 ntBASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 AC010154.1-201ENST00000425857 269 ntBASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 MRPS10P1-201ENST00000448483 130 ntBASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 AC010409.1-201ENST00000487382 476 ntBASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 RNU7-99P-201ENST00000516271 62 ntBASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 MIR4423-201ENST00000580922 80 ntBASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 MIR4435-1-201ENST00000582552 80 ntBASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 MIR4672-201ENST00000583126 81 ntBASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 AC092881.1-201ENST00000638218 2733 ntBASIC1.81□□□□□ -2.12
LRIF1Q5T3J3 SNORA27.1-201ENST00000362604 124 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 Y_RNA.158-201ENST00000363651 101 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 Y_RNA.361-201ENST00000365515 120 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 SNORD63-201ENST00000384262 68 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 SNORA67.3-201ENST00000384366 140 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 MIR873-201ENST00000401120 77 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 AL079342.1-201ENST00000401460 267 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 HMGN2P19-201ENST00000425149 265 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 AC005002.2-201ENST00000438228 269 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 RPEP5-201ENST00000441137 268 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms