Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 UBL5P4-201ENST00000562584 236 ntBASIC0.57□□□□□ -2.32
ZNF404Q494X3 MIR5000-201ENST00000577717 103 ntBASIC0.57□□□□□ -2.32
ZNF404Q494X3 AL590095.2-201ENST00000604136 117 ntBASIC0.57□□□□□ -2.32
ZNF404Q494X3 RNU6-254P-201ENST00000363377 107 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 Y_RNA.179-201ENST00000363844 90 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 MIR605-201ENST00000385078 83 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 RNU6-159P-201ENST00000391080 106 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.56□□□□□ -2.32
ZNF404Q494X3 DAP3P1-201ENST00000441522 278 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 MTCO2P7-201ENST00000446518 666 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.56□□□□□ -2.32
ZNF404Q494X3 RNU7-21P-201ENST00000459430 62 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 RPL30P10-201ENST00000488148 337 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 OR9P1P-201ENST00000496431 281 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 AC097462.1-201ENST00000514125 324 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.56□□□□□ -2.32
ZNF404Q494X3 AP002001.1-203ENST00000534002 267 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.56□□□□□ -2.32
ZNF404Q494X3 MIR4714-201ENST00000580728 77 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 PIGPP4-201ENST00000584447 307 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 AC119751.7-201ENST00000600494 245 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 AC010620.1-201ENST00000601088 1102 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 RNU6-89P-201ENST00000606519 100 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 RMST_2.1-201ENST00000617263 136 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 AC009248.2-201ENST00000619826 254 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 AC068137.4-201ENST00000638485 296 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 AC099654.12-201ENST00000639868 649 ntBASIC0.56□□□□□ -2.32
ZNF404Q494X3 RNA5SP361-201ENST00000362686 118 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 Y_RNA.122-201ENST00000363331 96 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 RNU6-42P-201ENST00000384165 107 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 Y_RNA.553-201ENST00000384670 102 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 MTCO3P19-201ENST00000415864 321 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 ERLEC1P1-201ENST00000433806 578 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 MTCO3P18-201ENST00000440206 761 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 AC104332.1-201ENST00000440471 797 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 MTCO1P19-201ENST00000443487 500 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.55□□□□□ -2.32
ZNF404Q494X3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.55□□□□□ -2.32
ZNF404Q494X3 RNU7-90P-201ENST00000459216 62 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 AC010598.1-201ENST00000510378 103 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 AC093303.1-201ENST00000514549 295 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 ACA59.1-201ENST00000515966 143 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 RNU7-12P-201ENST00000516030 62 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 RNA5SP255-201ENST00000516370 107 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 RNU7-28P-201ENST00000516759 62 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 RNU7-172P-201ENST00000517125 64 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 AC004812.1-201ENST00000540773 146 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 RPL21P9-201ENST00000556149 474 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 MIR6734-201ENST00000621166 68 ntBASIC0.55□□□□□ -2.32
ZNF404Q494X3 RNU6-1085P-201ENST00000363576 107 ntBASIC0.54□□□□□ -2.32
ZNF404Q494X3 Y_RNA.359-201ENST00000365498 102 ntBASIC0.54□□□□□ -2.32
ZNF404Q494X3 SNORD116-13-201ENST00000384408 92 ntBASIC0.54□□□□□ -2.32
ZNF404Q494X3 MIR562-201ENST00000384894 95 ntBASIC0.54□□□□□ -2.32
ZNF404Q494X3 SNORA75.2-201ENST00000391138 150 ntBASIC0.54□□□□□ -2.32
ZNF404Q494X3 SNORA75.3-201ENST00000391231 150 ntBASIC0.54□□□□□ -2.32
ZNF404Q494X3 RNU6-733P-201ENST00000410759 104 ntBASIC0.54□□□□□ -2.32
ZNF404Q494X3 RPS26P5-201ENST00000418544 335 ntBASIC0.54□□□□□ -2.32
ZNF404Q494X3 RPEP5-201ENST00000441137 268 ntBASIC0.54□□□□□ -2.32
ZNF404Q494X3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.54□□□□□ -2.32
ZNF404Q494X3 LINC01399-202ENST00000458450 244 ntBASIC0.54□□□□□ -2.32
ZNF404Q494X3 AC091021.1-201ENST00000468051 388 ntBASIC0.54□□□□□ -2.32
ZNF404Q494X3 RNU6-107P-201ENST00000516643 102 ntBASIC0.54□□□□□ -2.32
ZNF404Q494X3 AC091144.1-201ENST00000519573 138 ntBASIC0.54□□□□□ -2.32
ZNF404Q494X3 AL158211.1-201ENST00000566763 763 ntBASIC0.54□□□□□ -2.32
ZNF404Q494X3 Y_RNA.796-201ENST00000364268 102 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 Y_RNA.267-201ENST00000364679 109 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 Y_RNA.269-201ENST00000364685 89 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 Y_RNA.799-201ENST00000364992 102 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 RNU6-95P-201ENST00000384697 107 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 MIR517A-201ENST00000385001 87 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 AL590632.1-201ENST00000424289 371 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 AC245047.8-201ENST00000456455 284 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 MTND1P11-201ENST00000456661 876 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 AC010424.1-201ENST00000506336 297 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.53□□□□□ -2.32
ZNF404Q494X3 SNORD111.1-201ENST00000516421 86 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 AP003484.1-201ENST00000530974 250 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 AC006362.1-201ENST00000567392 174 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 7SK.7-201ENST00000603504 247 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 AC004832.4-201ENST00000608952 331 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 AL096861.1-201ENST00000610899 123 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.53□□□□□ -2.32
ZNF404Q494X3 MIR6863-201ENST00000636112 90 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 CASC19-280ENST00000642102 1351 ntBASIC0.53□□□□□ -2.32
ZNF404Q494X3 AC005592.1-201ENST00000566527 1640 ntBASIC0.53□□□□□ -2.33
ZNF404Q494X3 RNU6-1252P-201ENST00000363054 104 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 Y_RNA.355-201ENST00000365462 98 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 Y_RNA.372-201ENST00000365599 102 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 Y_RNA.508-201ENST00000384502 114 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 FABP5P4-201ENST00000437203 171 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 AL049830.1-201ENST00000468034 425 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 AP000870.1-201ENST00000472927 406 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.52□□□□□ -2.33
ZNF404Q494X3 SNORA70.12-201ENST00000516084 153 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 Y_RNA.665-201ENST00000516177 98 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 RNU6-341P-201ENST00000516973 96 ntBASIC0.52□□□□□ -2.33
ZNF404Q494X3 AC134698.4-201ENST00000523451 826 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms