Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.97□□□□□ -1.93
SSRP1Q08945 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SSRP1Q08945 SNORA27.1-201ENST00000362604 124 ntBASIC2.97□□□□□ -1.93
SSRP1Q08945 SNORA38-201ENST00000363946 132 ntBASIC2.97□□□□□ -1.93
SSRP1Q08945 RNU6-1072P-201ENST00000384703 107 ntBASIC2.97□□□□□ -1.93
SSRP1Q08945 RNU6-443P-201ENST00000384780 107 ntBASIC2.97□□□□□ -1.93
SSRP1Q08945 RPPH1-2P-201ENST00000516688 293 ntBASIC2.97□□□□□ -1.93
SSRP1Q08945 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.97□□□□□ -1.93
SSRP1Q08945 AC009127.3-201ENST00000570531 403 ntBASIC2.97□□□□□ -1.93
SSRP1Q08945 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.97□□□□□ -1.93
SSRP1Q08945 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SSRP1Q08945 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
SSRP1Q08945 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SSRP1Q08945 AC062016.1-201ENST00000355719 319 ntBASIC2.96□□□□□ -1.94
SSRP1Q08945 Y_RNA.76-201ENST00000362931 109 ntBASIC2.96□□□□□ -1.94
SSRP1Q08945 Y_RNA.122-201ENST00000363331 96 ntBASIC2.96□□□□□ -1.94
SSRP1Q08945 Y_RNA.124-201ENST00000363339 93 ntBASIC2.96□□□□□ -1.94
SSRP1Q08945 MIR1262-201ENST00000408276 93 ntBASIC2.96□□□□□ -1.94
SSRP1Q08945 RNU6-855P-201ENST00000410395 104 ntBASIC2.96□□□□□ -1.94
SSRP1Q08945 RNU2-14P-201ENST00000411053 191 ntBASIC2.96□□□□□ -1.94
SSRP1Q08945 RNA5SP184-201ENST00000411071 108 ntBASIC2.96□□□□□ -1.94
SSRP1Q08945 RNA5SP492-201ENST00000411330 114 ntBASIC2.96□□□□□ -1.94
SSRP1Q08945 CYCSP26-201ENST00000534107 320 ntBASIC2.96□□□□□ -1.94
SSRP1Q08945 AC026271.5-201ENST00000577873 130 ntBASIC2.96□□□□□ -1.94
SSRP1Q08945 MIR5092-201ENST00000583139 88 ntBASIC2.96□□□□□ -1.94
SSRP1Q08945 MIR4282-201ENST00000583613 67 ntBASIC2.96□□□□□ -1.94
SSRP1Q08945 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
SSRP1Q08945 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SSRP1Q08945 RNU6-1272P-201ENST00000362776 107 ntBASIC2.95□□□□□ -1.94
SSRP1Q08945 Y_RNA.368-201ENST00000365547 113 ntBASIC2.95□□□□□ -1.94
SSRP1Q08945 MIR196B-201ENST00000384852 84 ntBASIC2.95□□□□□ -1.94
SSRP1Q08945 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.95□□□□□ -1.94
SSRP1Q08945 AC108938.1-201ENST00000451204 136 ntBASIC2.95□□□□□ -1.94
SSRP1Q08945 SNORD2.1-201ENST00000458762 69 ntBASIC2.95□□□□□ -1.94
SSRP1Q08945 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.95□□□□□ -1.94
SSRP1Q08945 AL442067.1-201ENST00000613261 223 ntBASIC2.95□□□□□ -1.94
SSRP1Q08945 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.95□□□□□ -1.94
SSRP1Q08945 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SSRP1Q08945 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SSRP1Q08945 RNU6-200P-201ENST00000364743 107 ntBASIC2.94□□□□□ -1.94
SSRP1Q08945 RNU6-160P-201ENST00000384591 107 ntBASIC2.94□□□□□ -1.94
SSRP1Q08945 RN7SKP284-201ENST00000411002 343 ntBASIC2.94□□□□□ -1.94
SSRP1Q08945 RNU6-651P-201ENST00000411040 105 ntBASIC2.94□□□□□ -1.94
SSRP1Q08945 AL135790.2-201ENST00000437701 267 ntBASIC2.94□□□□□ -1.94
SSRP1Q08945 AC245102.2-201ENST00000448956 180 ntBASIC2.94□□□□□ -1.94
SSRP1Q08945 HSPE1P13-201ENST00000451143 297 ntBASIC2.94□□□□□ -1.94
SSRP1Q08945 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.94□□□□□ -1.94
SSRP1Q08945 RPS26P55-201ENST00000471178 356 ntBASIC2.94□□□□□ -1.94
SSRP1Q08945 AC136628.3-201ENST00000521868 290 ntBASIC2.94□□□□□ -1.94
SSRP1Q08945 AC027419.1-201ENST00000522976 328 ntBASIC2.94□□□□□ -1.94
SSRP1Q08945 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.94□□□□□ -1.94
SSRP1Q08945 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.94□□□□□ -1.94
SSRP1Q08945 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SSRP1Q08945 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
SSRP1Q08945 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
SSRP1Q08945 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.93□□□□□ -1.94
SSRP1Q08945 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.93□□□□□ -1.94
SSRP1Q08945 Y_RNA.200-201ENST00000364018 102 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 RNU6-407P-201ENST00000365280 104 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 Y_RNA.341-201ENST00000365341 102 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 Y_RNA.456-201ENST00000384232 111 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 AL139156.1-201ENST00000412785 841 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 AC060773.1-201ENST00000421698 310 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 CR769767.1-201ENST00000436337 346 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 AL109933.2-201ENST00000452651 260 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 RNU1-131P-201ENST00000458943 161 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 Y_RNA.638-201ENST00000459374 113 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 RN7SL429P-201ENST00000479090 223 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 RN7SL499P-201ENST00000481141 276 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 RN7SL489P-201ENST00000486185 223 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 RN7SL327P-201ENST00000488659 223 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.93□□□□□ -1.94
SSRP1Q08945 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.93□□□□□ -1.94
SSRP1Q08945 RNA5SP20-201ENST00000515976 84 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 AL078604.3-201ENST00000615580 211 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 RN7SL853P-201ENST00000617250 223 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 AC073349.3-201ENST00000617616 186 ntBASIC2.93□□□□□ -1.94
SSRP1Q08945 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.92□□□□□ -1.94
SSRP1Q08945 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SSRP1Q08945 MIR449A-201ENST00000362113 91 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 RNU1-91P-201ENST00000364746 163 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 Y_RNA.292-201ENST00000364904 97 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 RNU1-148P-201ENST00000384472 162 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 MIR27B-201ENST00000385129 97 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 MIR1253-201ENST00000408273 105 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 MIR1298-201ENST00000408783 112 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 BTF3P11-201ENST00000426582 477 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.92□□□□□ -1.94
SSRP1Q08945 RNU6-138P-201ENST00000515952 107 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 SNORD116-28-201ENST00000516123 91 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 RNU6-1146P-201ENST00000516282 102 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 AC130289.1-201ENST00000577321 73 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 U2.15-201ENST00000611544 191 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 U2.16-201ENST00000613119 191 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 U2.12-201ENST00000613778 191 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 U2.20-201ENST00000613956 192 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 U2.9-201ENST00000615427 191 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 U2.11-201ENST00000616345 191 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 U2.2-201ENST00000616535 191 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 U2.3-201ENST00000617785 191 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms