Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 SNORA20B-201ENST00000384220 132 ntBASIC0.01□□□□□ -2.41
CCL20P78556 SNORA2B-201ENST00000384583 137 ntBASIC0.01□□□□□ -2.41
CCL20P78556 RNU6-925P-201ENST00000384629 104 ntBASIC0.01□□□□□ -2.41
CCL20P78556 MIR516B2-201ENST00000385190 85 ntBASIC0.01□□□□□ -2.41
CCL20P78556 MIR1298-201ENST00000408783 112 ntBASIC0.01□□□□□ -2.41
CCL20P78556 CYCSP46-201ENST00000423569 204 ntBASIC0.01□□□□□ -2.41
CCL20P78556 AC018865.2-201ENST00000423631 129 ntBASIC0.01□□□□□ -2.41
CCL20P78556 MRPS10P2-201ENST00000431226 381 ntBASIC0.01□□□□□ -2.41
CCL20P78556 AC073415.1-201ENST00000449240 153 ntBASIC0.01□□□□□ -2.41
CCL20P78556 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.01□□□□□ -2.41
CCL20P78556 PCNPP5-201ENST00000452246 481 ntBASIC0.01□□□□□ -2.41
CCL20P78556 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.01□□□□□ -2.41
CCL20P78556 AC018710.1-201ENST00000506509 158 ntBASIC0.01□□□□□ -2.41
CCL20P78556 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.01□□□□□ -2.41
CCL20P78556 AC092436.3-201ENST00000511788 257 ntBASIC0.01□□□□□ -2.41
CCL20P78556 RNU6-107P-201ENST00000516643 102 ntBASIC0.01□□□□□ -2.41
CCL20P78556 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.01□□□□□ -2.41
CCL20P78556 AC016957.1-201ENST00000534895 309 ntBASIC0.01□□□□□ -2.41
CCL20P78556 MIR4764-201ENST00000580680 88 ntBASIC0.01□□□□□ -2.41
CCL20P78556 AC092747.3-201ENST00000603769 301 ntBASIC0.01□□□□□ -2.41
CCL20P78556 AC104695.3-201ENST00000604052 296 ntBASIC0.01□□□□□ -2.41
CCL20P78556 AC103705.1-201ENST00000619013 241 ntBASIC0.01□□□□□ -2.41
CCL20P78556 AC006504.8-201ENST00000621046 635 ntBASIC0.01□□□□□ -2.41
CCL20P78556 MIR6513-201ENST00000621188 64 ntBASIC0.01□□□□□ -2.41
CCL20P78556 RNU6-280P-201ENST00000364145 104 ntBASIC0□□□□□ -2.41
CCL20P78556 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0□□□□□ -2.41
CCL20P78556 RNU6-541P-201ENST00000384709 110 ntBASIC0□□□□□ -2.41
CCL20P78556 MIR153-2-201ENST00000385225 87 ntBASIC0□□□□□ -2.41
CCL20P78556 RNU6-248P-201ENST00000410720 107 ntBASIC0□□□□□ -2.41
CCL20P78556 MTCO2P11-201ENST00000431069 680 ntBASIC0□□□□□ -2.41
CCL20P78556 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0□□□□□ -2.41
CCL20P78556 RPS29P1-201ENST00000465274 159 ntBASIC0□□□□□ -2.41
CCL20P78556 AC114811.1-201ENST00000507207 168 ntBASIC0□□□□□ -2.41
CCL20P78556 RNA5SP20-201ENST00000515976 84 ntBASIC0□□□□□ -2.41
CCL20P78556 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0□□□□□ -2.41
CCL20P78556 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0□□□□□ -2.41
CCL20P78556 AC022523.2-201ENST00000561045 150 ntBASIC0□□□□□ -2.41
CCL20P78556 MIR4498-201ENST00000577599 66 ntBASIC0□□□□□ -2.41
CCL20P78556 MIR5000-201ENST00000577717 103 ntBASIC0□□□□□ -2.41
CCL20P78556 MIR4524B-201ENST00000581569 115 ntBASIC0□□□□□ -2.41
CCL20P78556 MIR4424-201ENST00000585257 86 ntBASIC0□□□□□ -2.41
CCL20P78556 MIR5692C1-201ENST00000585309 91 ntBASIC0□□□□□ -2.41
CCL20P78556 LARP7P1-201ENST00000605576 316 ntBASIC0□□□□□ -2.41
CCL20P78556 AL121757.2-201ENST00000611223 313 ntBASIC0□□□□□ -2.41
CCL20P78556 AL138726.1-201ENST00000614873 333 ntBASIC0□□□□□ -2.41
CCL20P78556 AL158209.2-201ENST00000619266 216 ntBASIC0□□□□□ -2.41
CCL20P78556 SNORD50.1-201ENST00000362987 71 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 SNORD44.1-201ENST00000363202 61 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 RNU6-214P-201ENST00000384130 107 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 RNY3P9-201ENST00000384727 106 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 MIR520G-201ENST00000385064 90 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 MIR520H-201ENST00000385126 88 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 RNA5SP95-201ENST00000410319 137 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.01□□□□□ -2.41
CCL20P78556 AC243428.1-201ENST00000421099 264 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 AC005534.2-201ENST00000431047 433 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 MTCO2P16-201ENST00000436962 677 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 SNORD11.1-201ENST00000459482 85 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 MTCO3P38-201ENST00000468910 766 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 RPS3AP17-201ENST00000472594 777 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.01□□□□□ -2.41
CCL20P78556 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 AL358944.1-201ENST00000528537 144 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 UBL5P4-201ENST00000562584 236 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 MIR4711-201ENST00000578274 70 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 RMST_2.1-201ENST00000617263 136 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 AC022306.3-201ENST00000619930 550 ntBASIC-0.01□□□□□ -2.41
CCL20P78556 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.01□□□□□ -2.41
CCL20P78556 SNORD68-201ENST00000363214 84 ntBASIC-0.02□□□□□ -2.41
CCL20P78556 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.02□□□□□ -2.41
CCL20P78556 RNU6-82P-201ENST00000363970 107 ntBASIC-0.02□□□□□ -2.41
CCL20P78556 MIR136-201ENST00000385207 82 ntBASIC-0.02□□□□□ -2.41
CCL20P78556 CALM2P3-201ENST00000400429 449 ntBASIC-0.02□□□□□ -2.41
CCL20P78556 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.02□□□□□ -2.41
CCL20P78556 RPL30P16-201ENST00000419341 429 ntBASIC-0.02□□□□□ -2.41
CCL20P78556 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.02□□□□□ -2.41
CCL20P78556 AC079354.2-201ENST00000453523 154 ntBASIC-0.02□□□□□ -2.41
CCL20P78556 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.02□□□□□ -2.41
CCL20P78556 AC093303.1-201ENST00000514549 295 ntBASIC-0.02□□□□□ -2.41
CCL20P78556 SNORA19.2-201ENST00000516013 114 ntBASIC-0.02□□□□□ -2.41
CCL20P78556 SNORA25.12-201ENST00000516202 82 ntBASIC-0.02□□□□□ -2.41
CCL20P78556 RNU7-43P-201ENST00000516554 64 ntBASIC-0.02□□□□□ -2.41
CCL20P78556 SNORA18.7-201ENST00000516910 131 ntBASIC-0.02□□□□□ -2.41
CCL20P78556 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
CCL20P78556 AF246928.1-201ENST00000623768 87 ntBASIC-0.02□□□□□ -2.41
CCL20P78556 SNORA27.1-201ENST00000362604 124 ntBASIC-0.03□□□□□ -2.41
CCL20P78556 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.03□□□□□ -2.41
CCL20P78556 MIR518A1-201ENST00000385068 85 ntBASIC-0.03□□□□□ -2.41
CCL20P78556 RNU6-159P-201ENST00000391080 106 ntBASIC-0.03□□□□□ -2.41
CCL20P78556 RNA5SP193-201ENST00000410353 107 ntBASIC-0.03□□□□□ -2.41
CCL20P78556 SNORD71-201ENST00000411292 86 ntBASIC-0.03□□□□□ -2.41
CCL20P78556 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.03□□□□□ -2.41
CCL20P78556 AL358934.1-201ENST00000432346 324 ntBASIC-0.03□□□□□ -2.41
CCL20P78556 AL392103.1-201ENST00000447000 198 ntBASIC-0.03□□□□□ -2.41
CCL20P78556 ELOCP24-201ENST00000456370 334 ntBASIC-0.03□□□□□ -2.41
CCL20P78556 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms