Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 MIR1302-2-201ENST00000607096 138 ntBASIC1.53□□□□□ -2.16
SRPXP78539 AL021879.1-201ENST00000611756 288 ntBASIC1.53□□□□□ -2.16
SRPXP78539 PART1_1.1-201ENST00000611761 217 ntBASIC1.53□□□□□ -2.16
SRPXP78539 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.53□□□□□ -2.16
SRPXP78539 AL138825.1-201ENST00000618587 192 ntBASIC1.53□□□□□ -2.16
SRPXP78539 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.53□□□□□ -2.16
SRPXP78539 AC092881.1-201ENST00000638218 2733 ntBASIC1.53□□□□□ -2.17
SRPXP78539 Y_RNA.111-201ENST00000363248 100 ntBASIC1.52□□□□□ -2.17
SRPXP78539 RNU6-626P-201ENST00000363354 107 ntBASIC1.52□□□□□ -2.17
SRPXP78539 SNORD14.1-201ENST00000365609 90 ntBASIC1.52□□□□□ -2.17
SRPXP78539 SNORA20B-201ENST00000384220 132 ntBASIC1.52□□□□□ -2.17
SRPXP78539 MRPL35P1-201ENST00000404272 572 ntBASIC1.52□□□□□ -2.17
SRPXP78539 RNU2-20P-201ENST00000410425 191 ntBASIC1.52□□□□□ -2.17
SRPXP78539 RNA5SP475-201ENST00000410568 110 ntBASIC1.52□□□□□ -2.17
SRPXP78539 AL158823.1-201ENST00000418441 478 ntBASIC1.52□□□□□ -2.17
SRPXP78539 RPEP5-201ENST00000441137 268 ntBASIC1.52□□□□□ -2.17
SRPXP78539 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.52□□□□□ -2.17
SRPXP78539 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.52□□□□□ -2.17
SRPXP78539 AC107393.1-201ENST00000512403 346 ntBASIC1.52□□□□□ -2.17
SRPXP78539 RNU6-475P-201ENST00000516073 104 ntBASIC1.52□□□□□ -2.17
SRPXP78539 RNU6-988P-201ENST00000519081 107 ntBASIC1.52□□□□□ -2.17
SRPXP78539 GNAI2P1-201ENST00000541815 315 ntBASIC1.52□□□□□ -2.17
SRPXP78539 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.52□□□□□ -2.17
SRPXP78539 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.52□□□□□ -2.17
SRPXP78539 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.52□□□□□ -2.17
SRPXP78539 AL773524.1-201ENST00000614065 229 ntBASIC1.52□□□□□ -2.17
SRPXP78539 U1.36-201ENST00000620684 176 ntBASIC1.52□□□□□ -2.17
SRPXP78539 U6.115-201ENST00000636045 103 ntBASIC1.52□□□□□ -2.17
SRPXP78539 RNU6-1266P-201ENST00000362794 105 ntBASIC1.51□□□□□ -2.17
SRPXP78539 Y_RNA.124-201ENST00000363339 93 ntBASIC1.51□□□□□ -2.17
SRPXP78539 RNU6-112P-201ENST00000363599 104 ntBASIC1.51□□□□□ -2.17
SRPXP78539 XGY1-201ENST00000381172 446 ntBASIC1.51□□□□□ -2.17
SRPXP78539 Y_RNA.471-201ENST00000384312 102 ntBASIC1.51□□□□□ -2.17
SRPXP78539 MRPL42P3-201ENST00000401492 326 ntBASIC1.51□□□□□ -2.17
SRPXP78539 AC244636.1-201ENST00000421152 228 ntBASIC1.51□□□□□ -2.17
SRPXP78539 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.51□□□□□ -2.17
SRPXP78539 CST2P1-201ENST00000425770 87 ntBASIC1.51□□□□□ -2.17
SRPXP78539 TRBV12-1-201ENST00000479785 344 ntBASIC1.51□□□□□ -2.17
SRPXP78539 RPL23AP63-201ENST00000498752 471 ntBASIC1.51□□□□□ -2.17
SRPXP78539 RNU6-397P-201ENST00000516226 104 ntBASIC1.51□□□□□ -2.17
SRPXP78539 SNORA31.17-201ENST00000516953 127 ntBASIC1.51□□□□□ -2.17
SRPXP78539 RNA5SP437-201ENST00000517249 129 ntBASIC1.51□□□□□ -2.17
SRPXP78539 AC084364.2-201ENST00000546924 395 ntBASIC1.51□□□□□ -2.17
SRPXP78539 MIR4419B-201ENST00000577260 68 ntBASIC1.51□□□□□ -2.17
SRPXP78539 AC005176.2-201ENST00000596933 147 ntBASIC1.51□□□□□ -2.17
SRPXP78539 AL390123.1-201ENST00000603216 237 ntBASIC1.51□□□□□ -2.17
SRPXP78539 AC124312.5-201ENST00000604451 268 ntBASIC1.51□□□□□ -2.17
SRPXP78539 AC069114.2-201ENST00000604699 304 ntBASIC1.51□□□□□ -2.17
SRPXP78539 AC016925.2-201ENST00000605108 242 ntBASIC1.51□□□□□ -2.17
SRPXP78539 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.51□□□□□ -2.17
SRPXP78539 AC040896.1-201ENST00000613819 479 ntBASIC1.51□□□□□ -2.17
SRPXP78539 U6.108-201ENST00000637764 58 ntBASIC1.51□□□□□ -2.17
SRPXP78539 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
SRPXP78539 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SRPXP78539 RNU4-76P-201ENST00000364509 141 ntBASIC1.5□□□□□ -2.17
SRPXP78539 RNU6-1227P-201ENST00000383981 107 ntBASIC1.5□□□□□ -2.17
SRPXP78539 Y_RNA.424-201ENST00000384063 103 ntBASIC1.5□□□□□ -2.17
SRPXP78539 RNU6-439P-201ENST00000384188 106 ntBASIC1.5□□□□□ -2.17
SRPXP78539 Y_RNA.527-201ENST00000384573 102 ntBASIC1.5□□□□□ -2.17
SRPXP78539 RNU6-296P-201ENST00000384608 107 ntBASIC1.5□□□□□ -2.17
SRPXP78539 RNU6-823P-201ENST00000391042 103 ntBASIC1.5□□□□□ -2.17
SRPXP78539 RNU6-1186P-201ENST00000410429 97 ntBASIC1.5□□□□□ -2.17
SRPXP78539 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.5□□□□□ -2.17
SRPXP78539 AL445646.1-201ENST00000431784 216 ntBASIC1.5□□□□□ -2.17
SRPXP78539 RPL23AP42-201ENST00000471152 471 ntBASIC1.5□□□□□ -2.17
SRPXP78539 RNU6-1146P-201ENST00000516282 102 ntBASIC1.5□□□□□ -2.17
SRPXP78539 RNU6-1137P-201ENST00000517073 99 ntBASIC1.5□□□□□ -2.17
SRPXP78539 RNU2-12P-201ENST00000517216 168 ntBASIC1.5□□□□□ -2.17
SRPXP78539 RNU7-128P-201ENST00000517247 62 ntBASIC1.5□□□□□ -2.17
SRPXP78539 AC022432.1-201ENST00000595739 310 ntBASIC1.5□□□□□ -2.17
SRPXP78539 AL121655.1-201ENST00000605811 308 ntBASIC1.5□□□□□ -2.17
SRPXP78539 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.5□□□□□ -2.17
SRPXP78539 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.49□□□□□ -2.17
SRPXP78539 RNU6-1019P-201ENST00000364424 107 ntBASIC1.49□□□□□ -2.17
SRPXP78539 SNORA72.2-201ENST00000365028 127 ntBASIC1.49□□□□□ -2.17
SRPXP78539 RNU6-1199P-201ENST00000411249 104 ntBASIC1.49□□□□□ -2.17
SRPXP78539 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.49□□□□□ -2.17
SRPXP78539 AL445685.2-201ENST00000422551 342 ntBASIC1.49□□□□□ -2.17
SRPXP78539 AC005534.2-201ENST00000431047 433 ntBASIC1.49□□□□□ -2.17
SRPXP78539 AL121890.1-201ENST00000435457 205 ntBASIC1.49□□□□□ -2.17
SRPXP78539 AL606517.2-201ENST00000442855 241 ntBASIC1.49□□□□□ -2.17
SRPXP78539 RPS27P22-201ENST00000478056 241 ntBASIC1.49□□□□□ -2.17
SRPXP78539 AC093852.1-201ENST00000503587 266 ntBASIC1.49□□□□□ -2.17
SRPXP78539 AC010598.1-201ENST00000510378 103 ntBASIC1.49□□□□□ -2.17
SRPXP78539 MIR1273D-201ENST00000577266 86 ntBASIC1.49□□□□□ -2.17
SRPXP78539 MIR4680-201ENST00000580906 66 ntBASIC1.49□□□□□ -2.17
SRPXP78539 MIR4438-201ENST00000585271 93 ntBASIC1.49□□□□□ -2.17
SRPXP78539 RAC1P9-201ENST00000604990 392 ntBASIC1.49□□□□□ -2.17
SRPXP78539 AC010205.1-201ENST00000616668 449 ntBASIC1.49□□□□□ -2.17
SRPXP78539 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SRPXP78539 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SRPXP78539 Y_RNA.143-201ENST00000363520 106 ntBASIC1.48□□□□□ -2.17
SRPXP78539 SNORD115-30-201ENST00000364117 82 ntBASIC1.48□□□□□ -2.17
SRPXP78539 RNU4-50P-201ENST00000364361 141 ntBASIC1.48□□□□□ -2.17
SRPXP78539 Y_RNA.243-201ENST00000364481 109 ntBASIC1.48□□□□□ -2.17
SRPXP78539 RNU6-407P-201ENST00000365280 104 ntBASIC1.48□□□□□ -2.17
SRPXP78539 Y_RNA.389-201ENST00000383924 113 ntBASIC1.48□□□□□ -2.17
SRPXP78539 RNU6-937P-201ENST00000384325 106 ntBASIC1.48□□□□□ -2.17
SRPXP78539 RNA5SP323-201ENST00000391094 133 ntBASIC1.48□□□□□ -2.17
SRPXP78539 AC009310.1-201ENST00000414414 451 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms