Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 MIR487A-201ENST00000385009 80 ntBASIC0.05□□□□□ -2.4
SKP1P63208 AC133104.1-201ENST00000429100 218 ntBASIC0.05□□□□□ -2.4
SKP1P63208 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.05□□□□□ -2.4
SKP1P63208 HMGN2P26-201ENST00000463169 339 ntBASIC0.05□□□□□ -2.4
SKP1P63208 AC091021.1-201ENST00000468051 388 ntBASIC0.05□□□□□ -2.4
SKP1P63208 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.05□□□□□ -2.4
SKP1P63208 CYCTP-201ENST00000504253 315 ntBASIC0.05□□□□□ -2.4
SKP1P63208 RNA5SP480-201ENST00000516840 109 ntBASIC0.05□□□□□ -2.4
SKP1P63208 MIR5583-1-201ENST00000580941 59 ntBASIC0.05□□□□□ -2.4
SKP1P63208 MIR548AB-201ENST00000584917 84 ntBASIC0.05□□□□□ -2.4
SKP1P63208 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
SKP1P63208 Y_RNA.267-201ENST00000364679 109 ntBASIC0.04□□□□□ -2.4
SKP1P63208 MIR573-201ENST00000384964 99 ntBASIC0.04□□□□□ -2.4
SKP1P63208 MIR32-201ENST00000384965 70 ntBASIC0.04□□□□□ -2.4
SKP1P63208 MIR452-201ENST00000385020 85 ntBASIC0.04□□□□□ -2.4
SKP1P63208 AL033528.1-201ENST00000453780 140 ntBASIC0.04□□□□□ -2.4
SKP1P63208 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.04□□□□□ -2.4
SKP1P63208 AC074133.1-201ENST00000515696 183 ntBASIC0.04□□□□□ -2.4
SKP1P63208 SNORA25.14-201ENST00000516481 132 ntBASIC0.04□□□□□ -2.4
SKP1P63208 AL358944.1-201ENST00000528537 144 ntBASIC0.04□□□□□ -2.4
SKP1P63208 AC104383.1-201ENST00000530297 370 ntBASIC0.04□□□□□ -2.4
SKP1P63208 AL008636.1-201ENST00000625038 1018 ntBASIC0.04□□□□□ -2.4
SKP1P63208 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
SKP1P63208 RNU6-222P-201ENST00000362438 107 ntBASIC0.03□□□□□ -2.4
SKP1P63208 RNU6-1329P-201ENST00000365664 107 ntBASIC0.03□□□□□ -2.4
SKP1P63208 Y_RNA.540-201ENST00000384638 111 ntBASIC0.03□□□□□ -2.4
SKP1P63208 CALM2P3-201ENST00000400429 449 ntBASIC0.03□□□□□ -2.4
SKP1P63208 MTND4P32-201ENST00000437189 1237 ntBASIC0.03□□□□□ -2.4
SKP1P63208 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.03□□□□□ -2.4
SKP1P63208 MTND4P18-201ENST00000447010 465 ntBASIC0.03□□□□□ -2.4
SKP1P63208 RNU7-180P-201ENST00000459240 63 ntBASIC0.03□□□□□ -2.4
SKP1P63208 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.03□□□□□ -2.4
SKP1P63208 Y_RNA.670-201ENST00000516255 105 ntBASIC0.03□□□□□ -2.4
SKP1P63208 MIR4300-201ENST00000581016 96 ntBASIC0.03□□□□□ -2.4
SKP1P63208 AC011458.1-201ENST00000604034 617 ntBASIC0.03□□□□□ -2.4
SKP1P63208 AC104695.3-201ENST00000604052 296 ntBASIC0.03□□□□□ -2.4
SKP1P63208 MIR8087-201ENST00000612745 78 ntBASIC0.03□□□□□ -2.4
SKP1P63208 AC010608.3-201ENST00000625048 527 ntBASIC0.03□□□□□ -2.4
SKP1P63208 MIR1-1-201ENST00000362147 71 ntBASIC0.02□□□□□ -2.41
SKP1P63208 RNU5F-3P-201ENST00000363767 117 ntBASIC0.02□□□□□ -2.41
SKP1P63208 RNU6-282P-201ENST00000365357 103 ntBASIC0.02□□□□□ -2.41
SKP1P63208 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
SKP1P63208 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.02□□□□□ -2.41
SKP1P63208 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.02□□□□□ -2.41
SKP1P63208 HSFY5P-201ENST00000453726 309 ntBASIC0.02□□□□□ -2.41
SKP1P63208 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.02□□□□□ -2.41
SKP1P63208 MTCO3P38-201ENST00000468910 766 ntBASIC0.02□□□□□ -2.41
SKP1P63208 AC120024.3-201ENST00000603167 156 ntBASIC0.02□□□□□ -2.41
SKP1P63208 RAC1P9-201ENST00000604990 392 ntBASIC0.02□□□□□ -2.41
SKP1P63208 AC087683.2-201ENST00000611384 326 ntBASIC0.02□□□□□ -2.41
SKP1P63208 AC016597.2-201ENST00000613256 341 ntBASIC0.02□□□□□ -2.41
SKP1P63208 AC015726.2-201ENST00000620112 122 ntBASIC0.02□□□□□ -2.41
SKP1P63208 SNORD115-32-201ENST00000364079 82 ntBASIC0.01□□□□□ -2.41
SKP1P63208 Y_RNA.415-201ENST00000384012 112 ntBASIC0.01□□□□□ -2.41
SKP1P63208 SNORA40.3-201ENST00000390964 122 ntBASIC0.01□□□□□ -2.41
SKP1P63208 ZNF885P-201ENST00000420174 1098 ntBASIC0.01□□□□□ -2.41
SKP1P63208 RNU6-1116P-201ENST00000517269 99 ntBASIC0.01□□□□□ -2.41
SKP1P63208 AC104576.1-201ENST00000524225 88 ntBASIC0.01□□□□□ -2.41
SKP1P63208 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.01□□□□□ -2.41
SKP1P63208 CPDP1-201ENST00000579660 283 ntBASIC0.01□□□□□ -2.41
SKP1P63208 MIR4768-201ENST00000585270 74 ntBASIC0.01□□□□□ -2.41
SKP1P63208 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.01□□□□□ -2.41
SKP1P63208 uc_338.34-201ENST00000617467 174 ntBASIC0.01□□□□□ -2.41
SKP1P63208 MTND4P12-201ENST00000498999 1377 ntBASIC0.01□□□□□ -2.41
SKP1P63208 SNORD44.1-201ENST00000363202 61 ntBASIC0□□□□□ -2.41
SKP1P63208 RNA5SP62-201ENST00000363457 110 ntBASIC0□□□□□ -2.41
SKP1P63208 MIR520C-201ENST00000385005 87 ntBASIC0□□□□□ -2.41
SKP1P63208 SNRPGP12-201ENST00000449481 213 ntBASIC0□□□□□ -2.41
SKP1P63208 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0□□□□□ -2.41
SKP1P63208 RNU7-41P-201ENST00000515917 61 ntBASIC0□□□□□ -2.41
SKP1P63208 RNU6-1096P-201ENST00000517089 102 ntBASIC0□□□□□ -2.41
SKP1P63208 SNORA74.3-201ENST00000517108 154 ntBASIC0□□□□□ -2.41
SKP1P63208 MTND4P7-201ENST00000523876 130 ntBASIC0□□□□□ -2.41
SKP1P63208 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0□□□□□ -2.41
SKP1P63208 AC007684.1-201ENST00000609671 477 ntBASIC0□□□□□ -2.41
SKP1P63208 HULC.1-201ENST00000612720 240 ntBASIC0□□□□□ -2.41
SKP1P63208 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
SKP1P63208 RNU6-181P-201ENST00000363225 107 ntBASIC-0.01□□□□□ -2.41
SKP1P63208 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.01□□□□□ -2.41
SKP1P63208 MIR15B-201ENST00000385045 98 ntBASIC-0.01□□□□□ -2.41
SKP1P63208 RNA5SP63-201ENST00000391225 112 ntBASIC-0.01□□□□□ -2.41
SKP1P63208 RNU2-9P-201ENST00000410194 145 ntBASIC-0.01□□□□□ -2.41
SKP1P63208 AL593851.1-201ENST00000426171 157 ntBASIC-0.01□□□□□ -2.41
SKP1P63208 Z98949.2-201ENST00000440996 144 ntBASIC-0.01□□□□□ -2.41
SKP1P63208 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.01□□□□□ -2.41
SKP1P63208 PCNPP5-201ENST00000452246 481 ntBASIC-0.01□□□□□ -2.41
SKP1P63208 MTCO3P10-201ENST00000455912 772 ntBASIC-0.01□□□□□ -2.41
SKP1P63208 RNU6-445P-201ENST00000516949 107 ntBASIC-0.01□□□□□ -2.41
SKP1P63208 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.01□□□□□ -2.41
SKP1P63208 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.01□□□□□ -2.41
SKP1P63208 LARP7P1-201ENST00000605576 316 ntBASIC-0.01□□□□□ -2.41
SKP1P63208 AL162730.1-201ENST00000605734 292 ntBASIC-0.01□□□□□ -2.41
SKP1P63208 MIR6718-201ENST00000616153 80 ntBASIC-0.01□□□□□ -2.41
SKP1P63208 AC092634.7-201ENST00000621022 103 ntBASIC-0.01□□□□□ -2.41
SKP1P63208 MIR4315-1-201ENST00000636800 73 ntBASIC-0.01□□□□□ -2.41
SKP1P63208 MIR4315-2-201ENST00000640925 73 ntBASIC-0.01□□□□□ -2.41
SKP1P63208 MIR18A-201ENST00000362310 71 ntBASIC-0.02□□□□□ -2.41
SKP1P63208 AC005534.2-201ENST00000431047 433 ntBASIC-0.02□□□□□ -2.41
SKP1P63208 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.02□□□□□ -2.41
SKP1P63208 RNU7-43P-201ENST00000516554 64 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms