Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC009994.1-201ENST00000606889 253 ntBASIC-2.4□□□□□ -2.79
RPL39P62891 MIRLET7C-201ENST00000362160 84 ntBASIC-2.41□□□□□ -2.8
RPL39P62891 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.41□□□□□ -2.8
RPL39P62891 MIR1253-201ENST00000408273 105 ntBASIC-2.41□□□□□ -2.8
RPL39P62891 MTND3P17-201ENST00000416968 344 ntBASIC-2.41□□□□□ -2.8
RPL39P62891 AC026616.1-201ENST00000523157 525 ntBASIC-2.41□□□□□ -2.8
RPL39P62891 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-2.41□□□□□ -2.8
RPL39P62891 AC244669.1-204ENST00000621564 178 ntBASIC-2.41□□□□□ -2.8
RPL39P62891 MIR4251-201ENST00000635819 61 ntBASIC-2.41□□□□□ -2.8
RPL39P62891 RNU6-873P-201ENST00000363833 107 ntBASIC-2.42□□□□□ -2.8
RPL39P62891 Y_RNA.329-201ENST00000365209 107 ntBASIC-2.42□□□□□ -2.8
RPL39P62891 MIR487A-201ENST00000385009 80 ntBASIC-2.42□□□□□ -2.8
RPL39P62891 MIR516B1-201ENST00000385211 90 ntBASIC-2.42□□□□□ -2.8
RPL39P62891 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-2.42□□□□□ -2.8
RPL39P62891 RNU6-754P-201ENST00000391166 107 ntBASIC-2.42□□□□□ -2.8
RPL39P62891 ERLEC1P1-201ENST00000433806 578 ntBASIC-2.42□□□□□ -2.8
RPL39P62891 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-2.42□□□□□ -2.8
RPL39P62891 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-2.42□□□□□ -2.8
RPL39P62891 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-2.42□□□□□ -2.8
RPL39P62891 AC107027.2-201ENST00000512197 115 ntBASIC-2.42□□□□□ -2.8
RPL39P62891 AC021146.9-201ENST00000512503 156 ntBASIC-2.42□□□□□ -2.8
RPL39P62891 Y_RNA.700-201ENST00000516806 100 ntBASIC-2.42□□□□□ -2.8
RPL39P62891 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-2.42□□□□□ -2.8
RPL39P62891 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-2.42□□□□□ -2.8
RPL39P62891 AC115990.1-201ENST00000526957 301 ntBASIC-2.42□□□□□ -2.8
RPL39P62891 AL355375.2-201ENST00000574825 175 ntBASIC-2.42□□□□□ -2.8
RPL39P62891 AL596327.1-201ENST00000603629 213 ntBASIC-2.42□□□□□ -2.8
RPL39P62891 CDR1-202ENST00000625883 1485 ntBASIC-2.43□□□□□ -2.8
RPL39P62891 Y_RNA.128-201ENST00000363391 112 ntBASIC-2.43□□□□□ -2.8
RPL39P62891 Y_RNA.174-201ENST00000363781 105 ntBASIC-2.43□□□□□ -2.8
RPL39P62891 RNU6-142P-201ENST00000384019 107 ntBASIC-2.43□□□□□ -2.8
RPL39P62891 AC011352.1-201ENST00000512300 793 ntBASIC-2.43□□□□□ -2.8
RPL39P62891 RNU6-948P-201ENST00000516374 107 ntBASIC-2.43□□□□□ -2.8
RPL39P62891 RNU7-28P-201ENST00000516759 62 ntBASIC-2.43□□□□□ -2.8
RPL39P62891 AP000753.3-201ENST00000604083 169 ntBASIC-2.43□□□□□ -2.8
RPL39P62891 RNU6-543P-201ENST00000362576 108 ntBASIC-2.44□□□□□ -2.8
RPL39P62891 Y_RNA.265-201ENST00000364677 108 ntBASIC-2.44□□□□□ -2.8
RPL39P62891 MIR891A-201ENST00000401237 79 ntBASIC-2.44□□□□□ -2.8
RPL39P62891 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-2.44□□□□□ -2.8
RPL39P62891 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-2.44□□□□□ -2.8
RPL39P62891 MTCYBP39-201ENST00000437562 491 ntBASIC-2.44□□□□□ -2.8
RPL39P62891 MTCYBP42-201ENST00000444653 1130 ntBASIC-2.44□□□□□ -2.8
RPL39P62891 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-2.44□□□□□ -2.8
RPL39P62891 MTND3P5-201ENST00000512798 333 ntBASIC-2.44□□□□□ -2.8
RPL39P62891 SNORD22.1-201ENST00000516331 125 ntBASIC-2.44□□□□□ -2.8
RPL39P62891 AC253576.2-201ENST00000618815 580 ntBASIC-2.44□□□□□ -2.8
RPL39P62891 RNU6-1339P-201ENST00000363574 91 ntBASIC-2.45□□□□□ -2.8
RPL39P62891 RNU6-1078P-201ENST00000364522 103 ntBASIC-2.45□□□□□ -2.8
RPL39P62891 RNU6-205P-201ENST00000390858 107 ntBASIC-2.45□□□□□ -2.8
RPL39P62891 RNA5SP118-201ENST00000410385 109 ntBASIC-2.45□□□□□ -2.8
RPL39P62891 AP000533.3-201ENST00000447704 118 ntBASIC-2.45□□□□□ -2.8
RPL39P62891 AC016632.1-201ENST00000503994 196 ntBASIC-2.45□□□□□ -2.8
RPL39P62891 Y_RNA.370-201ENST00000365589 108 ntBASIC-2.46□□□□□ -2.8
RPL39P62891 AL590084.2-201ENST00000401481 382 ntBASIC-2.46□□□□□ -2.8
RPL39P62891 AL031779.1-201ENST00000415663 330 ntBASIC-2.46□□□□□ -2.8
RPL39P62891 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-2.46□□□□□ -2.8
RPL39P62891 CALM2P2-201ENST00000428512 440 ntBASIC-2.46□□□□□ -2.8
RPL39P62891 AC005345.1-201ENST00000431868 217 ntBASIC-2.46□□□□□ -2.8
RPL39P62891 AC079781.2-201ENST00000446424 169 ntBASIC-2.46□□□□□ -2.8
RPL39P62891 RNU6-1265P-201ENST00000516342 103 ntBASIC-2.46□□□□□ -2.8
RPL39P62891 RNU6-479P-201ENST00000516348 105 ntBASIC-2.46□□□□□ -2.8
RPL39P62891 RNU7-128P-201ENST00000517247 62 ntBASIC-2.46□□□□□ -2.8
RPL39P62891 VN1R87P-201ENST00000596706 487 ntBASIC-2.46□□□□□ -2.8
RPL39P62891 AL158050.2-201ENST00000605336 568 ntBASIC-2.46□□□□□ -2.8
RPL39P62891 AC104458.1-201ENST00000608243 463 ntBASIC-2.46□□□□□ -2.8
RPL39P62891 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-2.46□□□□□ -2.8
RPL39P62891 RNU6-1082P-201ENST00000364574 107 ntBASIC-2.47□□□□□ -2.8
RPL39P62891 Y_RNA.447-201ENST00000384184 113 ntBASIC-2.47□□□□□ -2.8
RPL39P62891 MIR300-201ENST00000401138 83 ntBASIC-2.47□□□□□ -2.8
RPL39P62891 TMSB4XP6-201ENST00000415187 135 ntBASIC-2.47□□□□□ -2.8
RPL39P62891 AL591704.1-201ENST00000432574 275 ntBASIC-2.47□□□□□ -2.8
RPL39P62891 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-2.47□□□□□ -2.8
RPL39P62891 NDUFAF4P4-201ENST00000454883 502 ntBASIC-2.47□□□□□ -2.8
RPL39P62891 SNORA25.13-201ENST00000516395 103 ntBASIC-2.47□□□□□ -2.8
RPL39P62891 LARP7P2-201ENST00000575306 125 ntBASIC-2.47□□□□□ -2.8
RPL39P62891 DPPA3P3-201ENST00000603842 430 ntBASIC-2.47□□□□□ -2.8
RPL39P62891 AP001033.2-201ENST00000609701 1003 ntBASIC-2.47□□□□□ -2.8
RPL39P62891 Y_RNA.32-201ENST00000362589 110 ntBASIC-2.48□□□□□ -2.81
RPL39P62891 RNU6-900P-201ENST00000384498 102 ntBASIC-2.48□□□□□ -2.81
RPL39P62891 MIR452-201ENST00000385020 85 ntBASIC-2.48□□□□□ -2.81
RPL39P62891 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.48□□□□□ -2.81
RPL39P62891 MCFD2P1-201ENST00000417812 300 ntBASIC-2.48□□□□□ -2.81
RPL39P62891 ZNF736P5Y-201ENST00000451173 805 ntBASIC-2.48□□□□□ -2.81
RPL39P62891 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-2.48□□□□□ -2.81
RPL39P62891 AC007547.1-201ENST00000462177 490 ntBASIC-2.48□□□□□ -2.81
RPL39P62891 AC093809.1-201ENST00000509155 340 ntBASIC-2.48□□□□□ -2.81
RPL39P62891 AC079395.1-201ENST00000510981 262 ntBASIC-2.48□□□□□ -2.81
RPL39P62891 AC068587.4-201ENST00000533893 186 ntBASIC-2.48□□□□□ -2.81
RPL39P62891 ZNF321P-202ENST00000550843 495 ntBASIC-2.48□□□□□ -2.81
RPL39P62891 AL157687.1-201ENST00000554853 619 ntBASIC-2.48□□□□□ -2.81
RPL39P62891 MIR4264-201ENST00000583520 66 ntBASIC-2.48□□□□□ -2.81
RPL39P62891 AC073869.9-201ENST00000641610 120 ntBASIC-2.48□□□□□ -2.81
RPL39P62891 RNU6-545P-201ENST00000362681 104 ntBASIC-2.49□□□□□ -2.81
RPL39P62891 Y_RNA.548-201ENST00000384656 105 ntBASIC-2.49□□□□□ -2.81
RPL39P62891 RNA5SP201-201ENST00000410316 124 ntBASIC-2.49□□□□□ -2.81
RPL39P62891 MIR1468-201ENST00000410600 86 ntBASIC-2.49□□□□□ -2.81
RPL39P62891 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-2.49□□□□□ -2.81
RPL39P62891 USP9YP28-201ENST00000435142 589 ntBASIC-2.49□□□□□ -2.81
RPL39P62891 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-2.49□□□□□ -2.81
RPL39P62891 RNU7-185P-201ENST00000459215 60 ntBASIC-2.49□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms