Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 MTATP6P20-201ENST00000414147 562 ntBASIC-0.6□□□□□ -2.51
RPS28P62857 RPL39P5-202ENST00000512505 151 ntBASIC-0.6□□□□□ -2.51
RPS28P62857 RNU4-49P-201ENST00000516080 140 ntBASIC-0.6□□□□□ -2.51
RPS28P62857 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.6□□□□□ -2.51
RPS28P62857 AC022616.3-201ENST00000523940 148 ntBASIC-0.6□□□□□ -2.51
RPS28P62857 MRPS36P4-201ENST00000534436 298 ntBASIC-0.6□□□□□ -2.51
RPS28P62857 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.6□□□□□ -2.51
RPS28P62857 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.6□□□□□ -2.51
RPS28P62857 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC-0.6□□□□□ -2.51
RPS28P62857 MIR4769-201ENST00000584126 77 ntBASIC-0.6□□□□□ -2.51
RPS28P62857 AC104984.5-201ENST00000586878 94 ntBASIC-0.6□□□□□ -2.51
RPS28P62857 AC027514.1-201ENST00000588561 1603 ntBASIC-0.6□□□□□ -2.51
RPS28P62857 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.61□□□□□ -2.51
RPS28P62857 RNU6-925P-201ENST00000384629 104 ntBASIC-0.61□□□□□ -2.51
RPS28P62857 MIR499A-201ENST00000384903 122 ntBASIC-0.61□□□□□ -2.51
RPS28P62857 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.61□□□□□ -2.51
RPS28P62857 SNORD100-201ENST00000408573 76 ntBASIC-0.61□□□□□ -2.51
RPS28P62857 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.61□□□□□ -2.51
RPS28P62857 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.61□□□□□ -2.51
RPS28P62857 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.61□□□□□ -2.51
RPS28P62857 SNORD65B-201ENST00000459126 73 ntBASIC-0.61□□□□□ -2.51
RPS28P62857 HMGN1P10-201ENST00000474557 553 ntBASIC-0.61□□□□□ -2.51
RPS28P62857 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.61□□□□□ -2.51
RPS28P62857 AC091178.2-201ENST00000584401 117 ntBASIC-0.61□□□□□ -2.51
RPS28P62857 MIR6715A-201ENST00000615929 79 ntBASIC-0.61□□□□□ -2.51
RPS28P62857 RNU6-396P-201ENST00000365369 105 ntBASIC-0.62□□□□□ -2.51
RPS28P62857 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.62□□□□□ -2.51
RPS28P62857 RNU6-284P-201ENST00000411105 106 ntBASIC-0.62□□□□□ -2.51
RPS28P62857 Z98949.2-201ENST00000440996 144 ntBASIC-0.62□□□□□ -2.51
RPS28P62857 MTCO2P3-201ENST00000442543 421 ntBASIC-0.62□□□□□ -2.51
RPS28P62857 AC079781.2-201ENST00000446424 169 ntBASIC-0.62□□□□□ -2.51
RPS28P62857 SNRPGP9-201ENST00000456025 225 ntBASIC-0.62□□□□□ -2.51
RPS28P62857 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.62□□□□□ -2.51
RPS28P62857 TRBVB-201ENST00000477100 408 ntBASIC-0.62□□□□□ -2.51
RPS28P62857 RNU2-69P-201ENST00000516061 100 ntBASIC-0.62□□□□□ -2.51
RPS28P62857 SNORA19.3-201ENST00000516165 130 ntBASIC-0.62□□□□□ -2.51
RPS28P62857 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.62□□□□□ -2.51
RPS28P62857 AC005730.3-201ENST00000583067 366 ntBASIC-0.62□□□□□ -2.51
RPS28P62857 MIR4676-201ENST00000583078 72 ntBASIC-0.62□□□□□ -2.51
RPS28P62857 RNU6-85P-201ENST00000605989 107 ntBASIC-0.62□□□□□ -2.51
RPS28P62857 MTND4P9-201ENST00000507819 1346 ntBASIC-0.63□□□□□ -2.51
RPS28P62857 SNORA20.2-201ENST00000383922 131 ntBASIC-0.63□□□□□ -2.51
RPS28P62857 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.63□□□□□ -2.51
RPS28P62857 SNORD70.1-201ENST00000391007 85 ntBASIC-0.63□□□□□ -2.51
RPS28P62857 RNU6-269P-201ENST00000391077 97 ntBASIC-0.63□□□□□ -2.51
RPS28P62857 RNU6-757P-201ENST00000410334 100 ntBASIC-0.63□□□□□ -2.51
RPS28P62857 MTND4LP11-201ENST00000422184 280 ntBASIC-0.63□□□□□ -2.51
RPS28P62857 MTND3P9-201ENST00000429526 346 ntBASIC-0.63□□□□□ -2.51
RPS28P62857 RPS29P8-201ENST00000445109 171 ntBASIC-0.63□□□□□ -2.51
RPS28P62857 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.63□□□□□ -2.51
RPS28P62857 AC026782.1-201ENST00000512952 449 ntBASIC-0.63□□□□□ -2.51
RPS28P62857 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.63□□□□□ -2.51
RPS28P62857 MTND1P5-201ENST00000517906 940 ntBASIC-0.63□□□□□ -2.51
RPS28P62857 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.63□□□□□ -2.51
RPS28P62857 BNIP3P39-201ENST00000601077 554 ntBASIC-0.63□□□□□ -2.51
RPS28P62857 RMST_3.1-201ENST00000611651 109 ntBASIC-0.63□□□□□ -2.51
RPS28P62857 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.63□□□□□ -2.51
RPS28P62857 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
RPS28P62857 SNORD68-201ENST00000363214 84 ntBASIC-0.64□□□□□ -2.51
RPS28P62857 MIR454-201ENST00000390180 115 ntBASIC-0.64□□□□□ -2.51
RPS28P62857 MIR760-201ENST00000390220 80 ntBASIC-0.64□□□□□ -2.51
RPS28P62857 HMGN2P22-201ENST00000427588 175 ntBASIC-0.64□□□□□ -2.51
RPS28P62857 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.64□□□□□ -2.51
RPS28P62857 AC005042.3-201ENST00000453230 174 ntBASIC-0.64□□□□□ -2.51
RPS28P62857 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC-0.64□□□□□ -2.51
RPS28P62857 AC091951.3-201ENST00000504093 246 ntBASIC-0.64□□□□□ -2.51
RPS28P62857 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.64□□□□□ -2.51
RPS28P62857 MIR3666-201ENST00000607845 111 ntBASIC-0.64□□□□□ -2.51
RPS28P62857 AL591926.4-201ENST00000616895 298 ntBASIC-0.64□□□□□ -2.51
RPS28P62857 AC009159.2-201ENST00000617603 606 ntBASIC-0.64□□□□□ -2.51
RPS28P62857 RNU6-161P-201ENST00000363051 106 ntBASIC-0.65□□□□□ -2.51
RPS28P62857 SNORD115-24-201ENST00000363528 82 ntBASIC-0.65□□□□□ -2.51
RPS28P62857 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.65□□□□□ -2.51
RPS28P62857 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.65□□□□□ -2.51
RPS28P62857 RNU6-245P-201ENST00000384020 107 ntBASIC-0.65□□□□□ -2.51
RPS28P62857 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.65□□□□□ -2.51
RPS28P62857 RNU4-30P-201ENST00000410245 143 ntBASIC-0.65□□□□□ -2.51
RPS28P62857 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.65□□□□□ -2.51
RPS28P62857 SNORD123-201ENST00000459473 70 ntBASIC-0.65□□□□□ -2.51
RPS28P62857 AF186996.7-201ENST00000492781 209 ntBASIC-0.65□□□□□ -2.51
RPS28P62857 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.65□□□□□ -2.51
RPS28P62857 MIR377-201ENST00000362145 69 ntBASIC-0.66□□□□□ -2.52
RPS28P62857 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.66□□□□□ -2.52
RPS28P62857 SNORA36.1-201ENST00000363424 132 ntBASIC-0.66□□□□□ -2.52
RPS28P62857 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.66□□□□□ -2.52
RPS28P62857 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.66□□□□□ -2.52
RPS28P62857 MTND4P32-201ENST00000437189 1237 ntBASIC-0.66□□□□□ -2.52
RPS28P62857 MTND1P26-201ENST00000440488 538 ntBASIC-0.66□□□□□ -2.52
RPS28P62857 RPL17P19-201ENST00000489069 552 ntBASIC-0.66□□□□□ -2.52
RPS28P62857 AC010598.1-201ENST00000510378 103 ntBASIC-0.66□□□□□ -2.52
RPS28P62857 RNU6-782P-201ENST00000516852 104 ntBASIC-0.66□□□□□ -2.52
RPS28P62857 MTND2P32-201ENST00000521584 1038 ntBASIC-0.66□□□□□ -2.52
RPS28P62857 AC133485.4-201ENST00000561835 220 ntBASIC-0.66□□□□□ -2.52
RPS28P62857 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.67□□□□□ -2.52
RPS28P62857 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.67□□□□□ -2.52
RPS28P62857 RNA5SP117-201ENST00000365294 118 ntBASIC-0.67□□□□□ -2.52
RPS28P62857 MIR938-201ENST00000401216 83 ntBASIC-0.67□□□□□ -2.52
RPS28P62857 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.67□□□□□ -2.52
RPS28P62857 SNORD75.1-201ENST00000408373 60 ntBASIC-0.67□□□□□ -2.52
RPS28P62857 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms