Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 ELOCP24-201ENST00000456370 334 ntBASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 RNU7-63P-201ENST00000459054 62 ntBASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 MTCO3P38-201ENST00000468910 766 ntBASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 RPS3AP17-201ENST00000472594 777 ntBASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 MTATP6P9-201ENST00000515039 680 ntBASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 SNORA25.12-201ENST00000516202 82 ntBASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 RNU7-43P-201ENST00000516554 64 ntBASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 SNORA18.7-201ENST00000516910 131 ntBASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 UBL5P4-201ENST00000562584 236 ntBASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 MIR4667-201ENST00000578933 66 ntBASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 AC090616.2-202ENST00000584248 222 ntBASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 AL121757.2-201ENST00000611223 313 ntBASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 AC009248.2-201ENST00000619826 254 ntBASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 AC078938.1-201ENST00000620993 318 ntBASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 MIR4315-1-201ENST00000636800 73 ntBASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 MIR4315-2-201ENST00000640925 73 ntBASIC-0.05□□□□□ -2.42
HIST1H2BDP58876 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 SNORA27.1-201ENST00000362604 124 ntBASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 RNU6-82P-201ENST00000363970 107 ntBASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 RNU6-280P-201ENST00000364145 104 ntBASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 RNU6-815P-201ENST00000384080 113 ntBASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 RNU6-933P-201ENST00000384424 107 ntBASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 SNORA40.8-201ENST00000411034 126 ntBASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 AC243428.1-201ENST00000421099 264 ntBASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 MRPS10P2-201ENST00000431226 381 ntBASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 AC093303.1-201ENST00000514549 295 ntBASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 RNU6-107P-201ENST00000516643 102 ntBASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 AC069113.3-201ENST00000521019 150 ntBASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 AC087683.1-201ENST00000591187 441 ntBASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 AC092747.3-201ENST00000603769 301 ntBASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 RAC1P9-201ENST00000604990 392 ntBASIC-0.06□□□□□ -2.42
HIST1H2BDP58876 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 MIR378A-201ENST00000362177 66 ntBASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 SNORD68-201ENST00000363214 84 ntBASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 RNU6-679P-201ENST00000391003 106 ntBASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 RNU6-613P-201ENST00000410412 108 ntBASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 AC005534.2-201ENST00000431047 433 ntBASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 AL121890.1-201ENST00000435457 205 ntBASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 AL137792.2-201ENST00000443484 235 ntBASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 AL136370.1-201ENST00000608166 691 ntBASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 AL133215.3-201ENST00000609801 448 ntBASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 AL138726.1-201ENST00000614873 333 ntBASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 AL158063.1-201ENST00000615349 536 ntBASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 AC243829.3-201ENST00000622177 108 ntBASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 AC005609.4-201ENST00000625071 447 ntBASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
HIST1H2BDP58876 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 AC117470.1-201ENST00000381974 330 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 RNU6-214P-201ENST00000384130 107 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 RNU6-541P-201ENST00000384709 110 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 MIR520F-201ENST00000384824 87 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 RNU6-321P-201ENST00000410912 106 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 SNORD71-201ENST00000411292 86 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 RPL30P16-201ENST00000419341 429 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 AC073261.1-201ENST00000429409 121 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 MTND1P4-201ENST00000435196 415 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 SNORD11.1-201ENST00000459482 85 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 AC093534.1-201ENST00000504977 132 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 AL118558.2-201ENST00000556294 238 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 PIGPP4-201ENST00000584447 307 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 RBM11P1-201ENST00000604951 799 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 AL355073.2-201ENST00000612106 557 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 AL354950.2-201ENST00000617939 290 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 AC127459.3-201ENST00000624328 466 ntBASIC-0.08□□□□□ -2.42
HIST1H2BDP58876 AL442644.1-201ENST00000454390 3105 ntBASIC-0.09□□□□□ -2.42
HIST1H2BDP58876 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.09□□□□□ -2.42
HIST1H2BDP58876 SNORD114-9-201ENST00000364370 72 ntBASIC-0.09□□□□□ -2.42
HIST1H2BDP58876 RNU6-117P-201ENST00000365415 107 ntBASIC-0.09□□□□□ -2.42
HIST1H2BDP58876 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.09□□□□□ -2.42
HIST1H2BDP58876 AL358934.1-201ENST00000432346 324 ntBASIC-0.09□□□□□ -2.42
HIST1H2BDP58876 AL353572.1-201ENST00000442490 417 ntBASIC-0.09□□□□□ -2.42
HIST1H2BDP58876 SNORD123-201ENST00000459473 70 ntBASIC-0.09□□□□□ -2.42
HIST1H2BDP58876 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.09□□□□□ -2.42
HIST1H2BDP58876 RNU6-863P-201ENST00000515989 104 ntBASIC-0.09□□□□□ -2.42
HIST1H2BDP58876 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.09□□□□□ -2.42
HIST1H2BDP58876 AC100830.2-201ENST00000581636 240 ntBASIC-0.09□□□□□ -2.42
HIST1H2BDP58876 AC012433.1-201ENST00000588916 398 ntBASIC-0.09□□□□□ -2.42
HIST1H2BDP58876 AC104260.1-201ENST00000616660 539 ntBASIC-0.09□□□□□ -2.42
HIST1H2BDP58876 AC022306.3-201ENST00000619930 550 ntBASIC-0.09□□□□□ -2.42
HIST1H2BDP58876 MIR4251-201ENST00000635819 61 ntBASIC-0.09□□□□□ -2.42
HIST1H2BDP58876 RNU4-21P-201ENST00000362802 126 ntBASIC-0.1□□□□□ -2.43
HIST1H2BDP58876 SNORA42.1-201ENST00000363515 137 ntBASIC-0.1□□□□□ -2.43
HIST1H2BDP58876 U8.5-201ENST00000364528 136 ntBASIC-0.1□□□□□ -2.43
HIST1H2BDP58876 RNU6-392P-201ENST00000364926 101 ntBASIC-0.1□□□□□ -2.43
HIST1H2BDP58876 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.1□□□□□ -2.43
HIST1H2BDP58876 RNU6-136P-201ENST00000384663 107 ntBASIC-0.1□□□□□ -2.43
HIST1H2BDP58876 MIR15B-201ENST00000385045 98 ntBASIC-0.1□□□□□ -2.43
HIST1H2BDP58876 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.1□□□□□ -2.43
HIST1H2BDP58876 MTCYBP4-201ENST00000401524 249 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 278.5 ms