Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.41□□□□□ -2.48
SDC4P31431 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.42□□□□□ -2.48
SDC4P31431 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.42□□□□□ -2.48
SDC4P31431 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.42□□□□□ -2.48
SDC4P31431 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.42□□□□□ -2.48
SDC4P31431 RNU6-187P-201ENST00000384139 106 ntBASIC-0.42□□□□□ -2.48
SDC4P31431 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.42□□□□□ -2.48
SDC4P31431 MIR452-201ENST00000385020 85 ntBASIC-0.42□□□□□ -2.48
SDC4P31431 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.42□□□□□ -2.48
SDC4P31431 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.42□□□□□ -2.48
SDC4P31431 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.42□□□□□ -2.48
SDC4P31431 AC079140.5-201ENST00000507882 310 ntBASIC-0.42□□□□□ -2.48
SDC4P31431 RNU6-63P-201ENST00000516690 95 ntBASIC-0.42□□□□□ -2.48
SDC4P31431 MIR4743-201ENST00000584576 69 ntBASIC-0.42□□□□□ -2.48
SDC4P31431 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.42□□□□□ -2.48
SDC4P31431 BNIP3P39-201ENST00000601077 554 ntBASIC-0.42□□□□□ -2.48
SDC4P31431 RNU6-85P-201ENST00000605989 107 ntBASIC-0.42□□□□□ -2.48
SDC4P31431 RNU6-1192P-201ENST00000612197 107 ntBASIC-0.42□□□□□ -2.48
SDC4P31431 RNU6-489P-201ENST00000618289 107 ntBASIC-0.42□□□□□ -2.48
SDC4P31431 AC137590.2-201ENST00000619709 240 ntBASIC-0.42□□□□□ -2.48
SDC4P31431 RPS27AP14-201ENST00000422868 454 ntBASIC-0.43□□□□□ -2.48
SDC4P31431 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.43□□□□□ -2.48
SDC4P31431 AL359672.1-201ENST00000442302 409 ntBASIC-0.43□□□□□ -2.48
SDC4P31431 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-0.43□□□□□ -2.48
SDC4P31431 SUMO1P2-201ENST00000452524 304 ntBASIC-0.43□□□□□ -2.48
SDC4P31431 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.43□□□□□ -2.48
SDC4P31431 RNU4-49P-201ENST00000516080 140 ntBASIC-0.43□□□□□ -2.48
SDC4P31431 AC010376.1-201ENST00000522101 334 ntBASIC-0.43□□□□□ -2.48
SDC4P31431 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
SDC4P31431 AL357075.2-201ENST00000614906 189 ntBASIC-0.43□□□□□ -2.48
SDC4P31431 MIR4251-201ENST00000635819 61 ntBASIC-0.43□□□□□ -2.48
SDC4P31431 U6.114-201ENST00000636407 96 ntBASIC-0.43□□□□□ -2.48
SDC4P31431 MTND4P4-201ENST00000439033 1366 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 RNU6-227P-201ENST00000362865 103 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 RNU6-205P-201ENST00000390858 107 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 RNU6-747P-201ENST00000390928 104 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 RNU6-241P-201ENST00000391148 104 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 MRPL42P2-201ENST00000403169 426 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 RNU4-46P-201ENST00000410818 138 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 MTATP6P20-201ENST00000414147 562 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.44□□□□□ -2.48
SDC4P31431 MTND1P4-201ENST00000435196 415 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 AC104692.1-201ENST00000472406 90 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.44□□□□□ -2.48
SDC4P31431 RNA5SP268-201ENST00000516828 124 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 AC133485.4-201ENST00000561835 220 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 AC005771.1-201ENST00000585581 349 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 AC027279.3-201ENST00000625055 122 ntBASIC-0.44□□□□□ -2.48
SDC4P31431 RNU6-727P-201ENST00000363592 107 ntBASIC-0.45□□□□□ -2.48
SDC4P31431 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.45□□□□□ -2.48
SDC4P31431 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.45□□□□□ -2.48
SDC4P31431 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.45□□□□□ -2.48
SDC4P31431 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.45□□□□□ -2.48
SDC4P31431 MIR320B2-201ENST00000408479 138 ntBASIC-0.45□□□□□ -2.48
SDC4P31431 AL606489.2-201ENST00000433886 234 ntBASIC-0.45□□□□□ -2.48
SDC4P31431 SNORD123-201ENST00000459473 70 ntBASIC-0.45□□□□□ -2.48
SDC4P31431 AC005178.1-201ENST00000508392 440 ntBASIC-0.45□□□□□ -2.48
SDC4P31431 RNU7-43P-201ENST00000516554 64 ntBASIC-0.45□□□□□ -2.48
SDC4P31431 MTND2P32-201ENST00000521584 1038 ntBASIC-0.45□□□□□ -2.48
SDC4P31431 MTND1P8-201ENST00000571424 950 ntBASIC-0.45□□□□□ -2.48
SDC4P31431 MIR4775-201ENST00000581168 75 ntBASIC-0.45□□□□□ -2.48
SDC4P31431 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.45□□□□□ -2.48
SDC4P31431 AC005176.2-201ENST00000596933 147 ntBASIC-0.45□□□□□ -2.48
SDC4P31431 AC138749.5-201ENST00000611461 208 ntBASIC-0.45□□□□□ -2.48
SDC4P31431 AL607023.1-201ENST00000620045 248 ntBASIC-0.45□□□□□ -2.48
SDC4P31431 MIR499B-201ENST00000636498 73 ntBASIC-0.45□□□□□ -2.48
SDC4P31431 MTND5P17-201ENST00000418405 1603 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 SNORD68-201ENST00000363214 84 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 RNU6-580P-201ENST00000365159 107 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 SNORA20.2-201ENST00000383922 131 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 RNU6-434P-201ENST00000384376 107 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 MIR136-201ENST00000385207 82 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 MIR214-201ENST00000385214 110 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 SNORD28B-201ENST00000390993 75 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 SNORA26-201ENST00000391286 122 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 MTCO3P19-201ENST00000415864 321 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 AC243428.1-201ENST00000421099 264 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.46□□□□□ -2.48
SDC4P31431 AC104850.1-201ENST00000435940 476 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 MTCO2P3-201ENST00000442543 421 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.46□□□□□ -2.48
SDC4P31431 EPS15P1-201ENST00000448836 336 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 AC005042.3-201ENST00000453230 174 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 MIR2115-201ENST00000516657 100 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 AC090572.1-201ENST00000519251 160 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.46□□□□□ -2.48
SDC4P31431 RPL21P9-201ENST00000556149 474 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 AC087683.1-201ENST00000591187 441 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 AC091948.2-201ENST00000636510 279 ntBASIC-0.46□□□□□ -2.48
SDC4P31431 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.47□□□□□ -2.48
SDC4P31431 MIR570-201ENST00000384917 97 ntBASIC-0.47□□□□□ -2.48
SDC4P31431 MIR7-2-201ENST00000384970 110 ntBASIC-0.47□□□□□ -2.48
SDC4P31431 AL049545.1-201ENST00000401856 572 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms