Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 RNU6-245P-201ENST00000384020 107 ntBASIC0.01□□□□□ -2.41
HOXA6P31267 RNU6-606P-201ENST00000384721 111 ntBASIC0.01□□□□□ -2.41
HOXA6P31267 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
HOXA6P31267 CALM2P3-201ENST00000400429 449 ntBASIC0.01□□□□□ -2.41
HOXA6P31267 MIR1265-201ENST00000408444 86 ntBASIC0.01□□□□□ -2.41
HOXA6P31267 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.01□□□□□ -2.41
HOXA6P31267 RNU7-167P-201ENST00000459160 62 ntBASIC0.01□□□□□ -2.41
HOXA6P31267 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.01□□□□□ -2.41
HOXA6P31267 MTND1P22-201ENST00000510572 951 ntBASIC0.01□□□□□ -2.41
HOXA6P31267 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.01□□□□□ -2.41
HOXA6P31267 AC104576.1-201ENST00000524225 88 ntBASIC0.01□□□□□ -2.41
HOXA6P31267 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.01□□□□□ -2.41
HOXA6P31267 MIR4509-3-201ENST00000578671 94 ntBASIC0.01□□□□□ -2.41
HOXA6P31267 MIR5589-201ENST00000579442 60 ntBASIC0.01□□□□□ -2.41
HOXA6P31267 FGF7P1-201ENST00000582820 288 ntBASIC0.01□□□□□ -2.41
HOXA6P31267 MIR4509-2-201ENST00000583920 94 ntBASIC0.01□□□□□ -2.41
HOXA6P31267 MIR4509-1-201ENST00000618224 94 ntBASIC0.01□□□□□ -2.41
HOXA6P31267 AC137590.2-201ENST00000619709 240 ntBASIC0.01□□□□□ -2.41
HOXA6P31267 RNA5SP517-201ENST00000364724 117 ntBASIC0□□□□□ -2.41
HOXA6P31267 RNU6-923P-201ENST00000364753 107 ntBASIC0□□□□□ -2.41
HOXA6P31267 Y_RNA.415-201ENST00000384012 112 ntBASIC0□□□□□ -2.41
HOXA6P31267 MIR1302-7-201ENST00000408841 72 ntBASIC0□□□□□ -2.41
HOXA6P31267 Y_RNA.598-201ENST00000410480 95 ntBASIC0□□□□□ -2.41
HOXA6P31267 RNU6-1304P-201ENST00000411374 106 ntBASIC0□□□□□ -2.41
HOXA6P31267 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0□□□□□ -2.41
HOXA6P31267 AC098592.1-201ENST00000419352 333 ntBASIC0□□□□□ -2.41
HOXA6P31267 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0□□□□□ -2.41
HOXA6P31267 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0□□□□□ -2.41
HOXA6P31267 AL009048.1-201ENST00000450437 298 ntBASIC0□□□□□ -2.41
HOXA6P31267 ZNF114P1-201ENST00000453500 292 ntBASIC0□□□□□ -2.41
HOXA6P31267 AC107401.1-201ENST00000503426 685 ntBASIC0□□□□□ -2.41
HOXA6P31267 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0□□□□□ -2.41
HOXA6P31267 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0□□□□□ -2.41
HOXA6P31267 AP001372.4-201ENST00000524889 472 ntBASIC0□□□□□ -2.41
HOXA6P31267 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0□□□□□ -2.41
HOXA6P31267 AC104383.1-201ENST00000530297 370 ntBASIC0□□□□□ -2.41
HOXA6P31267 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0□□□□□ -2.41
HOXA6P31267 MTND4P33-201ENST00000556706 766 ntBASIC0□□□□□ -2.41
HOXA6P31267 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
HOXA6P31267 MIR4636-201ENST00000582271 80 ntBASIC0□□□□□ -2.41
HOXA6P31267 AC090517.2-201ENST00000614966 680 ntBASIC0□□□□□ -2.41
HOXA6P31267 AC006435.5-201ENST00000624486 112 ntBASIC0□□□□□ -2.41
HOXA6P31267 MIR411-201ENST00000362239 96 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 MIR18A-201ENST00000362310 71 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 RNU6-500P-201ENST00000362349 107 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 RNU6-833P-201ENST00000363486 107 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 RNY4P34-201ENST00000364779 95 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 SNORA2B-201ENST00000384583 137 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 MIR520F-201ENST00000384824 87 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 MIR573-201ENST00000384964 99 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 MIR520G-201ENST00000385064 90 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 MIR520H-201ENST00000385126 88 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 SNORA40.4-201ENST00000390971 128 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 RNU6-679P-201ENST00000391003 106 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 MIR891A-201ENST00000401237 79 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 AC073261.1-201ENST00000429409 121 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 MRPS10P1-201ENST00000448483 130 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 RNU7-138P-201ENST00000459479 64 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 AC091133.4-201ENST00000511142 308 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 AC105417.1-201ENST00000514691 285 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 AC074133.1-201ENST00000515696 183 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 RNU6-863P-201ENST00000515989 104 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 MTND1P5-201ENST00000517906 940 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.01□□□□□ -2.41
HOXA6P31267 HIF1AP1-201ENST00000553642 175 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 MIR3682-201ENST00000581338 84 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 Z84480.1-201ENST00000605131 311 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 AC064836.2-201ENST00000609491 462 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 AP000240.1-201ENST00000609910 452 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 AL357075.2-201ENST00000614906 189 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 MIR7844-201ENST00000616161 122 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 AC098679.4-201ENST00000624241 654 ntBASIC-0.01□□□□□ -2.41
HOXA6P31267 MIR1-1-201ENST00000362147 71 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 SNORD113.3-201ENST00000364630 78 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 RNU6-700P-201ENST00000391043 107 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 AL390729.2-201ENST00000416137 156 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 ZNF885P-201ENST00000420174 1098 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 AL359672.1-201ENST00000442302 409 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.02□□□□□ -2.41
HOXA6P31267 U8.21-201ENST00000459536 136 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.02□□□□□ -2.41
HOXA6P31267 RPL23AP54-201ENST00000495129 419 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.02□□□□□ -2.41
HOXA6P31267 AC005178.1-201ENST00000508392 440 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.02□□□□□ -2.41
HOXA6P31267 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.02□□□□□ -2.41
HOXA6P31267 MTATP6P9-201ENST00000515039 680 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 RNA5SP54-201ENST00000516951 92 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 RNU6-341P-201ENST00000516973 96 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 AP002004.2-201ENST00000531656 154 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 RPL21P9-201ENST00000556149 474 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 AC104695.3-201ENST00000604052 296 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 AC006566.1-201ENST00000608943 513 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 U2.17-201ENST00000611454 95 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 AC015726.2-201ENST00000620112 122 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 MIR4315-1-201ENST00000636800 73 ntBASIC-0.02□□□□□ -2.41
HOXA6P31267 MIR4315-2-201ENST00000640925 73 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms