Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.49□□□□□ -2.17
RPA1P27694 MTND4P29-201ENST00000503122 1372 ntBASIC1.48□□□□□ -2.17
RPA1P27694 RNA5SP432-201ENST00000362480 116 ntBASIC1.48□□□□□ -2.17
RPA1P27694 SNORD115-8-201ENST00000363856 82 ntBASIC1.48□□□□□ -2.17
RPA1P27694 Y_RNA.259-201ENST00000364619 101 ntBASIC1.48□□□□□ -2.17
RPA1P27694 RNU6-593P-201ENST00000364716 112 ntBASIC1.48□□□□□ -2.17
RPA1P27694 SNORD115-38-201ENST00000365037 82 ntBASIC1.48□□□□□ -2.17
RPA1P27694 Y_RNA.358-201ENST00000365491 99 ntBASIC1.48□□□□□ -2.17
RPA1P27694 RNU6-281P-201ENST00000384212 103 ntBASIC1.48□□□□□ -2.17
RPA1P27694 Y_RNA.509-201ENST00000384506 99 ntBASIC1.48□□□□□ -2.17
RPA1P27694 MIR586-201ENST00000385035 97 ntBASIC1.48□□□□□ -2.17
RPA1P27694 MIR548B-201ENST00000385247 97 ntBASIC1.48□□□□□ -2.17
RPA1P27694 RNU6-1009P-201ENST00000390996 107 ntBASIC1.48□□□□□ -2.17
RPA1P27694 RNY4P36-201ENST00000391116 96 ntBASIC1.48□□□□□ -2.17
RPA1P27694 SNORA75.6-201ENST00000391318 127 ntBASIC1.48□□□□□ -2.17
RPA1P27694 AC016909.1-201ENST00000415916 166 ntBASIC1.48□□□□□ -2.17
RPA1P27694 AC060773.1-201ENST00000421698 310 ntBASIC1.48□□□□□ -2.17
RPA1P27694 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.48□□□□□ -2.17
RPA1P27694 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.48□□□□□ -2.17
RPA1P27694 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.48□□□□□ -2.17
RPA1P27694 AL603825.1-201ENST00000438481 80 ntBASIC1.48□□□□□ -2.17
RPA1P27694 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.48□□□□□ -2.17
RPA1P27694 RNU1-98P-201ENST00000458992 160 ntBASIC1.48□□□□□ -2.17
RPA1P27694 RNU6-1198P-201ENST00000516904 67 ntBASIC1.48□□□□□ -2.17
RPA1P27694 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
RPA1P27694 MIR302D-201ENST00000362275 68 ntBASIC1.47□□□□□ -2.17
RPA1P27694 SNORA7.1-201ENST00000363750 139 ntBASIC1.47□□□□□ -2.17
RPA1P27694 RNU5E-4P-201ENST00000364931 120 ntBASIC1.47□□□□□ -2.17
RPA1P27694 RNU6-318P-201ENST00000384283 103 ntBASIC1.47□□□□□ -2.17
RPA1P27694 Y_RNA.579-201ENST00000390939 94 ntBASIC1.47□□□□□ -2.17
RPA1P27694 MIR190B-201ENST00000401119 79 ntBASIC1.47□□□□□ -2.17
RPA1P27694 MTCYBP4-201ENST00000401524 249 ntBASIC1.47□□□□□ -2.17
RPA1P27694 Y_RNA.604-201ENST00000410574 102 ntBASIC1.47□□□□□ -2.17
RPA1P27694 EIF1P2-201ENST00000428233 350 ntBASIC1.47□□□□□ -2.17
RPA1P27694 AC092423.1-201ENST00000430165 186 ntBASIC1.47□□□□□ -2.17
RPA1P27694 AC009474.2-201ENST00000451383 136 ntBASIC1.47□□□□□ -2.17
RPA1P27694 RPS29P29-201ENST00000456396 171 ntBASIC1.47□□□□□ -2.17
RPA1P27694 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
RPA1P27694 RNU7-87P-201ENST00000459343 62 ntBASIC1.47□□□□□ -2.17
RPA1P27694 SNORD19B-201ENST00000459623 84 ntBASIC1.47□□□□□ -2.17
RPA1P27694 AC079140.2-201ENST00000506193 142 ntBASIC1.47□□□□□ -2.17
RPA1P27694 MTND3P22-201ENST00000510932 243 ntBASIC1.47□□□□□ -2.17
RPA1P27694 RNU6-470P-201ENST00000515954 104 ntBASIC1.47□□□□□ -2.17
RPA1P27694 RNA5SP54-201ENST00000516951 92 ntBASIC1.47□□□□□ -2.17
RPA1P27694 RNU6-699P-201ENST00000517081 110 ntBASIC1.47□□□□□ -2.17
RPA1P27694 RNA5SP437-201ENST00000517249 129 ntBASIC1.47□□□□□ -2.17
RPA1P27694 SUB1P3-201ENST00000564581 315 ntBASIC1.47□□□□□ -2.17
RPA1P27694 MIR3660-201ENST00000584845 100 ntBASIC1.47□□□□□ -2.17
RPA1P27694 AL133255.1-201ENST00000606374 441 ntBASIC1.47□□□□□ -2.17
RPA1P27694 PISRT1.1-201ENST00000616930 107 ntBASIC1.47□□□□□ -2.17
RPA1P27694 AL121890.5-201ENST00000620848 304 ntBASIC1.47□□□□□ -2.17
RPA1P27694 AC138305.3-201ENST00000624988 240 ntBASIC1.47□□□□□ -2.17
RPA1P27694 MIR338-201ENST00000636369 67 ntBASIC1.47□□□□□ -2.17
RPA1P27694 MTND5P35-201ENST00000557537 1720 ntBASIC1.46□□□□□ -2.18
RPA1P27694 AC100821.1-201ENST00000523153 2479 ntBASIC1.46□□□□□ -2.18
RPA1P27694 AL161722.3-201ENST00000605789 2983 ntBASIC1.46□□□□□ -2.18
RPA1P27694 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
RPA1P27694 Y_RNA.80-201ENST00000362996 102 ntBASIC1.46□□□□□ -2.18
RPA1P27694 SNORD1A-201ENST00000364968 72 ntBASIC1.46□□□□□ -2.18
RPA1P27694 Y_RNA.387-201ENST00000383918 102 ntBASIC1.46□□□□□ -2.18
RPA1P27694 Y_RNA.485-201ENST00000384395 102 ntBASIC1.46□□□□□ -2.18
RPA1P27694 MIR153-2-201ENST00000385225 87 ntBASIC1.46□□□□□ -2.18
RPA1P27694 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
RPA1P27694 AC093019.1-201ENST00000443135 252 ntBASIC1.46□□□□□ -2.18
RPA1P27694 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.46□□□□□ -2.18
RPA1P27694 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.46□□□□□ -2.18
RPA1P27694 ELOCP24-201ENST00000456370 334 ntBASIC1.46□□□□□ -2.18
RPA1P27694 RNU7-169P-201ENST00000459456 61 ntBASIC1.46□□□□□ -2.18
RPA1P27694 AC004223.1-201ENST00000479840 271 ntBASIC1.46□□□□□ -2.18
RPA1P27694 RPL17P19-201ENST00000489069 552 ntBASIC1.46□□□□□ -2.18
RPA1P27694 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.46□□□□□ -2.18
RPA1P27694 RNU7-175P-201ENST00000515915 61 ntBASIC1.46□□□□□ -2.18
RPA1P27694 AC091144.1-201ENST00000519573 138 ntBASIC1.46□□□□□ -2.18
RPA1P27694 AC024995.1-201ENST00000523014 93 ntBASIC1.46□□□□□ -2.18
RPA1P27694 AC068338.1-201ENST00000565567 176 ntBASIC1.46□□□□□ -2.18
RPA1P27694 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.46□□□□□ -2.18
RPA1P27694 MIR7974-201ENST00000615835 79 ntBASIC1.46□□□□□ -2.18
RPA1P27694 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
RPA1P27694 Y_RNA.5-201ENST00000362334 102 ntBASIC1.45□□□□□ -2.18
RPA1P27694 RNU6-1305P-201ENST00000364353 104 ntBASIC1.45□□□□□ -2.18
RPA1P27694 Y_RNA.463-201ENST00000384271 102 ntBASIC1.45□□□□□ -2.18
RPA1P27694 RNU6-1297P-201ENST00000384415 104 ntBASIC1.45□□□□□ -2.18
RPA1P27694 MIR329-1-201ENST00000385028 80 ntBASIC1.45□□□□□ -2.18
RPA1P27694 AL161935.2-201ENST00000414627 60 ntBASIC1.45□□□□□ -2.18
RPA1P27694 AC027119.1-201ENST00000440877 241 ntBASIC1.45□□□□□ -2.18
RPA1P27694 RNU7-152P-201ENST00000458982 64 ntBASIC1.45□□□□□ -2.18
RPA1P27694 snoU13.27-201ENST00000459278 104 ntBASIC1.45□□□□□ -2.18
RPA1P27694 AC099513.1-201ENST00000490423 301 ntBASIC1.45□□□□□ -2.18
RPA1P27694 AC093303.1-201ENST00000514549 295 ntBASIC1.45□□□□□ -2.18
RPA1P27694 RNU6-966P-201ENST00000516479 104 ntBASIC1.45□□□□□ -2.18
RPA1P27694 RNU6-344P-201ENST00000516635 111 ntBASIC1.45□□□□□ -2.18
RPA1P27694 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.45□□□□□ -2.18
RPA1P27694 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.45□□□□□ -2.18
RPA1P27694 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.45□□□□□ -2.18
RPA1P27694 AC004584.2-201ENST00000570407 410 ntBASIC1.45□□□□□ -2.18
RPA1P27694 AC055872.1-201ENST00000570978 278 ntBASIC1.45□□□□□ -2.18
RPA1P27694 PRR13P7-201ENST00000605538 430 ntBASIC1.45□□□□□ -2.18
RPA1P27694 AC126177.8-201ENST00000618339 1015 ntBASIC1.45□□□□□ -2.18
RPA1P27694 Y_RNA.31-201ENST00000362574 102 ntBASIC1.44□□□□□ -2.18
RPA1P27694 snoU2-30.2-201ENST00000362805 70 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms