Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.25□□□□□ -2.21
XRCC1P18887 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.25□□□□□ -2.21
XRCC1P18887 U6.108-201ENST00000637764 58 ntBASIC1.25□□□□□ -2.21
XRCC1P18887 MTND5P16-201ENST00000460269 1703 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 Y_RNA.2-201ENST00000362330 96 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 Y_RNA.48-201ENST00000362710 103 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 Y_RNA.164-201ENST00000363709 102 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 Y_RNA.339-201ENST00000365325 102 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 SNORD26-201ENST00000384147 75 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 RNU6-331P-201ENST00000384724 107 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 RNA5SP109-201ENST00000391010 116 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 MIR548F5-201ENST00000408421 86 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 Y_RNA.594-201ENST00000410373 140 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 RN7SKP200-201ENST00000410564 320 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 AC018710.1-201ENST00000506509 158 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 AC010598.1-201ENST00000510378 103 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 AC105029.1-201ENST00000520250 669 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.24□□□□□ -2.21
XRCC1P18887 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.24□□□□□ -2.21
XRCC1P18887 AC073413.2-201ENST00000604332 360 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 AC005014.2-201ENST00000607795 599 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 AL133216.2-202ENST00000634512 349 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 AC091812.1-201ENST00000432235 1948 ntBASIC1.24□□□□□ -2.21
XRCC1P18887 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
XRCC1P18887 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.23□□□□□ -2.21
XRCC1P18887 RNY1P16-201ENST00000363063 111 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 RNU6-601P-201ENST00000384540 107 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 MRPL35P1-201ENST00000404272 572 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 RPL37P10-201ENST00000412884 288 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 EIF1P2-201ENST00000428233 350 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 RPS27P1-201ENST00000450552 247 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 AC099513.1-201ENST00000490423 301 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.23□□□□□ -2.21
XRCC1P18887 AC116353.2-201ENST00000505332 712 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.23□□□□□ -2.21
XRCC1P18887 Y_RNA.676-201ENST00000516393 96 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 RNU6-107P-201ENST00000516643 102 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 AL442163.3-201ENST00000554110 156 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 FRG2DP-202ENST00000566967 323 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 MIR3937-201ENST00000580135 106 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 AL162424.1-201ENST00000602325 221 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 AP001485.1-201ENST00000604799 199 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 U6atac.1-201ENST00000616025 117 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.23□□□□□ -2.21
XRCC1P18887 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
XRCC1P18887 RNU6-1264P-201ENST00000383891 107 ntBASIC1.22□□□□□ -2.21
XRCC1P18887 MRPL42P3-201ENST00000401492 326 ntBASIC1.22□□□□□ -2.21
XRCC1P18887 RNU6-1186P-201ENST00000410429 97 ntBASIC1.22□□□□□ -2.21
XRCC1P18887 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.22□□□□□ -2.21
XRCC1P18887 SNX2P2-201ENST00000424553 323 ntBASIC1.22□□□□□ -2.21
XRCC1P18887 PGBD4P5-201ENST00000445958 426 ntBASIC1.22□□□□□ -2.21
XRCC1P18887 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.22□□□□□ -2.21
XRCC1P18887 SNORD65B-201ENST00000459126 73 ntBASIC1.22□□□□□ -2.21
XRCC1P18887 RPL31P58-201ENST00000469001 379 ntBASIC1.22□□□□□ -2.21
XRCC1P18887 AC069439.1-201ENST00000494739 167 ntBASIC1.22□□□□□ -2.21
XRCC1P18887 AC074133.1-201ENST00000515696 183 ntBASIC1.22□□□□□ -2.21
XRCC1P18887 Y_RNA.670-201ENST00000516255 105 ntBASIC1.22□□□□□ -2.21
XRCC1P18887 AC091144.1-201ENST00000519573 138 ntBASIC1.22□□□□□ -2.21
XRCC1P18887 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.22□□□□□ -2.21
XRCC1P18887 RAB11AP2-201ENST00000545905 639 ntBASIC1.22□□□□□ -2.21
XRCC1P18887 AC005668.1-201ENST00000571142 476 ntBASIC1.22□□□□□ -2.21
XRCC1P18887 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.22□□□□□ -2.21
XRCC1P18887 AC022217.4-201ENST00000604389 163 ntBASIC1.22□□□□□ -2.21
XRCC1P18887 MIR6078-201ENST00000611069 100 ntBASIC1.22□□□□□ -2.21
XRCC1P18887 PISRT1.1-201ENST00000616930 107 ntBASIC1.22□□□□□ -2.21
XRCC1P18887 RNU6-222P-201ENST00000362438 107 ntBASIC1.21□□□□□ -2.22
XRCC1P18887 RNU6-767P-201ENST00000384132 107 ntBASIC1.21□□□□□ -2.22
XRCC1P18887 RNU6-1031P-201ENST00000384773 107 ntBASIC1.21□□□□□ -2.22
XRCC1P18887 MIR329-1-201ENST00000385028 80 ntBASIC1.21□□□□□ -2.22
XRCC1P18887 MIR513A1-201ENST00000385138 129 ntBASIC1.21□□□□□ -2.22
XRCC1P18887 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
XRCC1P18887 MTCYBP4-201ENST00000401524 249 ntBASIC1.21□□□□□ -2.22
XRCC1P18887 RNU7-128P-201ENST00000517247 62 ntBASIC1.21□□□□□ -2.22
XRCC1P18887 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.21□□□□□ -2.22
XRCC1P18887 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.21□□□□□ -2.22
XRCC1P18887 MIR4438-201ENST00000585271 93 ntBASIC1.21□□□□□ -2.22
XRCC1P18887 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.21□□□□□ -2.22
XRCC1P18887 AL929325.1-201ENST00000603096 117 ntBASIC1.21□□□□□ -2.22
XRCC1P18887 AC040896.1-201ENST00000613819 479 ntBASIC1.21□□□□□ -2.22
XRCC1P18887 MIR8054-201ENST00000620877 86 ntBASIC1.21□□□□□ -2.22
XRCC1P18887 AC098679.4-201ENST00000624241 654 ntBASIC1.21□□□□□ -2.22
XRCC1P18887 AC099654.5-201ENST00000636479 350 ntBASIC1.21□□□□□ -2.22
XRCC1P18887 RNU6-1145P-201ENST00000384246 107 ntBASIC1.2□□□□□ -2.22
XRCC1P18887 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
XRCC1P18887 AL034345.1-201ENST00000407768 123 ntBASIC1.2□□□□□ -2.22
XRCC1P18887 MTCO3P19-201ENST00000415864 321 ntBASIC1.2□□□□□ -2.22
XRCC1P18887 RPS27P16-201ENST00000425758 201 ntBASIC1.2□□□□□ -2.22
XRCC1P18887 AC245047.3-201ENST00000429428 127 ntBASIC1.2□□□□□ -2.22
XRCC1P18887 UQCRBP2-201ENST00000447827 297 ntBASIC1.2□□□□□ -2.22
XRCC1P18887 MRPS10P1-201ENST00000448483 130 ntBASIC1.2□□□□□ -2.22
XRCC1P18887 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.2□□□□□ -2.22
XRCC1P18887 RN7SKP179-201ENST00000516126 217 ntBASIC1.2□□□□□ -2.22
XRCC1P18887 AC009229.3-201ENST00000608056 282 ntBASIC1.2□□□□□ -2.22
XRCC1P18887 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.2□□□□□ -2.22
XRCC1P18887 AC092794.1-201ENST00000612734 582 ntBASIC1.2□□□□□ -2.22
XRCC1P18887 AC104260.1-201ENST00000616660 539 ntBASIC1.2□□□□□ -2.22
XRCC1P18887 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
XRCC1P18887 Y_RNA.88-201ENST00000363029 99 ntBASIC1.19□□□□□ -2.22
XRCC1P18887 RNU6-53P-201ENST00000365367 106 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms