Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 NDUFAF4P4-201ENST00000454883 502 ntBASIC-2.31□□□□□ -2.78
TOP2AP11388 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-2.31□□□□□ -2.78
TOP2AP11388 MTCO3P15-201ENST00000526563 574 ntBASIC-2.31□□□□□ -2.78
TOP2AP11388 U6.107-201ENST00000637108 79 ntBASIC-2.31□□□□□ -2.78
TOP2AP11388 U6.108-201ENST00000637764 58 ntBASIC-2.31□□□□□ -2.78
TOP2AP11388 RNU6-512P-201ENST00000364438 103 ntBASIC-2.32□□□□□ -2.78
TOP2AP11388 Y_RNA.287-201ENST00000364853 94 ntBASIC-2.32□□□□□ -2.78
TOP2AP11388 MIR9-2-201ENST00000384838 87 ntBASIC-2.32□□□□□ -2.78
TOP2AP11388 HIGD1AP15-201ENST00000416198 280 ntBASIC-2.32□□□□□ -2.78
TOP2AP11388 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-2.32□□□□□ -2.78
TOP2AP11388 LAMTOR3P2-201ENST00000504479 232 ntBASIC-2.32□□□□□ -2.78
TOP2AP11388 SNORD22.1-201ENST00000516331 125 ntBASIC-2.32□□□□□ -2.78
TOP2AP11388 AL158211.4-201ENST00000606988 584 ntBASIC-2.32□□□□□ -2.78
TOP2AP11388 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-2.32□□□□□ -2.78
TOP2AP11388 RNY4P7-201ENST00000364600 96 ntBASIC-2.32□□□□□ -2.78
TOP2AP11388 MIR8485-201ENST00000401372 91 ntBASIC-2.32□□□□□ -2.78
TOP2AP11388 RPS3AP3-201ENST00000411933 242 ntBASIC-2.32□□□□□ -2.78
TOP2AP11388 AL365338.1-201ENST00000422282 858 ntBASIC-2.32□□□□□ -2.78
TOP2AP11388 ERLEC1P1-201ENST00000433806 578 ntBASIC-2.32□□□□□ -2.78
TOP2AP11388 AC010486.3-201ENST00000511602 785 ntBASIC-2.32□□□□□ -2.78
TOP2AP11388 RNU6-572P-201ENST00000516724 80 ntBASIC-2.32□□□□□ -2.78
TOP2AP11388 AL596211.1-201ENST00000569873 2277 ntBASIC-2.33□□□□□ -2.78
TOP2AP11388 SSR1P2-201ENST00000415208 787 ntBASIC-2.33□□□□□ -2.78
TOP2AP11388 AL031779.1-201ENST00000415663 330 ntBASIC-2.33□□□□□ -2.78
TOP2AP11388 TMEM251P1-201ENST00000503717 318 ntBASIC-2.33□□□□□ -2.78
TOP2AP11388 AC010205.1-201ENST00000616668 449 ntBASIC-2.33□□□□□ -2.78
TOP2AP11388 AC092656.1-203ENST00000624134 423 ntBASIC-2.33□□□□□ -2.78
TOP2AP11388 RNU4-15P-201ENST00000362613 141 ntBASIC-2.34□□□□□ -2.78
TOP2AP11388 RNU6-932P-201ENST00000391108 106 ntBASIC-2.34□□□□□ -2.78
TOP2AP11388 MTND1P4-201ENST00000435196 415 ntBASIC-2.34□□□□□ -2.78
TOP2AP11388 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-2.34□□□□□ -2.78
TOP2AP11388 AC124016.2-201ENST00000610058 665 ntBASIC-2.34□□□□□ -2.78
TOP2AP11388 AL354950.2-201ENST00000617939 290 ntBASIC-2.34□□□□□ -2.78
TOP2AP11388 AC244669.1-204ENST00000621564 178 ntBASIC-2.34□□□□□ -2.78
TOP2AP11388 Y_RNA.56-201ENST00000362798 112 ntBASIC-2.35□□□□□ -2.79
TOP2AP11388 RNU6-873P-201ENST00000363833 107 ntBASIC-2.35□□□□□ -2.79
TOP2AP11388 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.35□□□□□ -2.79
TOP2AP11388 BTBD7P2-201ENST00000441962 620 ntBASIC-2.35□□□□□ -2.79
TOP2AP11388 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.35□□□□□ -2.79
TOP2AP11388 RNU6-135P-201ENST00000516769 101 ntBASIC-2.35□□□□□ -2.79
TOP2AP11388 RNU6-1098P-201ENST00000516772 96 ntBASIC-2.35□□□□□ -2.79
TOP2AP11388 SNORD45.3-201ENST00000363836 72 ntBASIC-2.36□□□□□ -2.79
TOP2AP11388 TMSB4XP6-201ENST00000415187 135 ntBASIC-2.36□□□□□ -2.79
TOP2AP11388 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-2.36□□□□□ -2.79
TOP2AP11388 AC113347.3-201ENST00000509113 148 ntBASIC-2.36□□□□□ -2.79
TOP2AP11388 AC009994.1-201ENST00000606889 253 ntBASIC-2.36□□□□□ -2.79
TOP2AP11388 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-2.37□□□□□ -2.79
TOP2AP11388 RNU6-479P-201ENST00000516348 105 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 BNIP3P24-201ENST00000593398 557 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 AC135803.1-201ENST00000608748 565 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 Y_RNA.263-201ENST00000364659 114 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 RNU6-784P-201ENST00000384330 106 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 MIR588-201ENST00000384900 83 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 AC098592.1-201ENST00000419352 333 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 MTCYBP5-201ENST00000423752 1135 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-2.37□□□□□ -2.79
TOP2AP11388 AL122001.1-201ENST00000457027 370 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 RPL37P6-201ENST00000460682 294 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-2.37□□□□□ -2.79
TOP2AP11388 RNA5SP272-201ENST00000516095 111 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 RNU5F-4P-201ENST00000516581 114 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 SNORA74.3-201ENST00000517108 154 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 AC004217.3-201ENST00000551552 878 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 MIR4639-201ENST00000584938 69 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 AL445584.3-201ENST00000617173 78 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 AC253576.2-201ENST00000618815 580 ntBASIC-2.37□□□□□ -2.79
TOP2AP11388 MT-TN-201ENST00000387400 73 ntBASIC-2.38□□□□□ -2.79
TOP2AP11388 MTCYBP42-201ENST00000444653 1130 ntBASIC-2.38□□□□□ -2.79
TOP2AP11388 HSPE1P23-201ENST00000509838 286 ntBASIC-2.38□□□□□ -2.79
TOP2AP11388 RNU6-1265P-201ENST00000516342 103 ntBASIC-2.38□□□□□ -2.79
TOP2AP11388 RNU6-1069P-201ENST00000516612 133 ntBASIC-2.38□□□□□ -2.79
TOP2AP11388 AP001372.4-201ENST00000524889 472 ntBASIC-2.38□□□□□ -2.79
TOP2AP11388 AC095057.3-201ENST00000567102 1157 ntBASIC-2.38□□□□□ -2.79
TOP2AP11388 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-2.38□□□□□ -2.79
TOP2AP11388 MIR377-201ENST00000362145 69 ntBASIC-2.39□□□□□ -2.79
TOP2AP11388 Y_RNA.114-201ENST00000363265 113 ntBASIC-2.39□□□□□ -2.79
TOP2AP11388 RNU6-540P-201ENST00000384622 101 ntBASIC-2.39□□□□□ -2.79
TOP2AP11388 AC114491.1-201ENST00000416095 246 ntBASIC-2.39□□□□□ -2.79
TOP2AP11388 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-2.39□□□□□ -2.79
TOP2AP11388 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-2.39□□□□□ -2.79
TOP2AP11388 AC005002.2-201ENST00000438228 269 ntBASIC-2.39□□□□□ -2.79
TOP2AP11388 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-2.39□□□□□ -2.79
TOP2AP11388 AC104629.1-201ENST00000494226 508 ntBASIC-2.39□□□□□ -2.79
TOP2AP11388 MTND2P38-201ENST00000522536 667 ntBASIC-2.39□□□□□ -2.79
TOP2AP11388 AP001189.2-201ENST00000527320 189 ntBASIC-2.39□□□□□ -2.79
TOP2AP11388 MTCYBP33-201ENST00000575007 1130 ntBASIC-2.39□□□□□ -2.79
TOP2AP11388 MCFD2P1-201ENST00000417812 300 ntBASIC-2.4□□□□□ -2.79
TOP2AP11388 AC079781.2-201ENST00000446424 169 ntBASIC-2.4□□□□□ -2.79
TOP2AP11388 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-2.4□□□□□ -2.79
TOP2AP11388 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-2.4□□□□□ -2.79
TOP2AP11388 AL158050.2-201ENST00000605336 568 ntBASIC-2.4□□□□□ -2.79
TOP2AP11388 RNU6-900P-201ENST00000384498 102 ntBASIC-2.41□□□□□ -2.79
TOP2AP11388 RNU6-1332P-201ENST00000516666 104 ntBASIC-2.41□□□□□ -2.79
TOP2AP11388 AL157687.1-201ENST00000554853 619 ntBASIC-2.41□□□□□ -2.79
TOP2AP11388 AC110760.3-201ENST00000598794 467 ntBASIC-2.41□□□□□ -2.79
TOP2AP11388 AL354696.1-201ENST00000614652 497 ntBASIC-2.41□□□□□ -2.79
TOP2AP11388 AL359547.2-201ENST00000615810 418 ntBASIC-2.41□□□□□ -2.79
TOP2AP11388 RNU6-1026P-201ENST00000384465 108 ntBASIC-2.42□□□□□ -2.8
TOP2AP11388 MIR19A-201ENST00000384878 82 ntBASIC-2.42□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms