Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC008134.1-201ENST00000420943 193 ntBASIC-0.63□□□□□ -2.51
TNFP01375 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.63□□□□□ -2.51
TNFP01375 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.63□□□□□ -2.51
TNFP01375 RNU6-377P-201ENST00000515965 102 ntBASIC-0.63□□□□□ -2.51
TNFP01375 RNA5SP470-201ENST00000516463 106 ntBASIC-0.63□□□□□ -2.51
TNFP01375 IGKV1-22-201ENST00000524313 326 ntBASIC-0.63□□□□□ -2.51
TNFP01375 FRG2DP-202ENST00000566967 323 ntBASIC-0.63□□□□□ -2.51
TNFP01375 MIR5006-201ENST00000583027 110 ntBASIC-0.63□□□□□ -2.51
TNFP01375 AL158032.1-201ENST00000605401 106 ntBASIC-0.63□□□□□ -2.51
TNFP01375 AL121992.2-201ENST00000606262 256 ntBASIC-0.63□□□□□ -2.51
TNFP01375 AC087588.2-201ENST00000617667 426 ntBASIC-0.63□□□□□ -2.51
TNFP01375 AL136221.1-201ENST00000621449 509 ntBASIC-0.63□□□□□ -2.51
TNFP01375 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.64□□□□□ -2.51
TNFP01375 RNU6-934P-201ENST00000365154 107 ntBASIC-0.64□□□□□ -2.51
TNFP01375 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.64□□□□□ -2.51
TNFP01375 MIR320C1-201ENST00000408566 88 ntBASIC-0.64□□□□□ -2.51
TNFP01375 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.64□□□□□ -2.51
TNFP01375 SUMO1P3-201ENST00000439961 304 ntBASIC-0.64□□□□□ -2.51
TNFP01375 AC009237.7-201ENST00000447357 229 ntBASIC-0.64□□□□□ -2.51
TNFP01375 MTND1P17-201ENST00000448961 204 ntBASIC-0.64□□□□□ -2.51
TNFP01375 RNA5SP67-201ENST00000516422 131 ntBASIC-0.64□□□□□ -2.51
TNFP01375 RNA5SP476-201ENST00000516613 103 ntBASIC-0.64□□□□□ -2.51
TNFP01375 RNU7-28P-201ENST00000516759 62 ntBASIC-0.64□□□□□ -2.51
TNFP01375 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.64□□□□□ -2.51
TNFP01375 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.64□□□□□ -2.51
TNFP01375 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.64□□□□□ -2.51
TNFP01375 AC023050.3-201ENST00000541142 333 ntBASIC-0.64□□□□□ -2.51
TNFP01375 AC103996.1-201ENST00000555468 102 ntBASIC-0.64□□□□□ -2.51
TNFP01375 MIR4771-2-201ENST00000577758 74 ntBASIC-0.64□□□□□ -2.51
TNFP01375 MIR4771-1-201ENST00000582617 74 ntBASIC-0.64□□□□□ -2.51
TNFP01375 AC012433.1-201ENST00000588916 398 ntBASIC-0.64□□□□□ -2.51
TNFP01375 AL139286.2-201ENST00000606838 396 ntBASIC-0.64□□□□□ -2.51
TNFP01375 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.64□□□□□ -2.51
TNFP01375 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.64□□□□□ -2.51
TNFP01375 AC008873.1-201ENST00000625051 138 ntBASIC-0.64□□□□□ -2.51
TNFP01375 SNORA1B-201ENST00000362535 133 ntBASIC-0.65□□□□□ -2.51
TNFP01375 U8.5-201ENST00000364528 136 ntBASIC-0.65□□□□□ -2.51
TNFP01375 RNU6-25P-201ENST00000383873 107 ntBASIC-0.65□□□□□ -2.51
TNFP01375 RNU6-48P-201ENST00000384161 107 ntBASIC-0.65□□□□□ -2.51
TNFP01375 RNU6-15P-201ENST00000384534 107 ntBASIC-0.65□□□□□ -2.51
TNFP01375 RNU6-29P-201ENST00000384637 107 ntBASIC-0.65□□□□□ -2.51
TNFP01375 MT-TQ-201ENST00000387372 72 ntBASIC-0.65□□□□□ -2.51
TNFP01375 MIR1284-201ENST00000408337 120 ntBASIC-0.65□□□□□ -2.51
TNFP01375 AL117351.1-201ENST00000438864 766 ntBASIC-0.65□□□□□ -2.51
TNFP01375 MTCO3P8-201ENST00000453691 755 ntBASIC-0.65□□□□□ -2.51
TNFP01375 snoU13.6-201ENST00000458785 104 ntBASIC-0.65□□□□□ -2.51
TNFP01375 snoU13.16-201ENST00000459350 104 ntBASIC-0.65□□□□□ -2.51
TNFP01375 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.65□□□□□ -2.51
TNFP01375 AC104383.1-201ENST00000530297 370 ntBASIC-0.65□□□□□ -2.51
TNFP01375 CR383656.4-201ENST00000546909 122 ntBASIC-0.65□□□□□ -2.51
TNFP01375 MIR4677-201ENST00000584153 80 ntBASIC-0.65□□□□□ -2.51
TNFP01375 AP002802.2-201ENST00000605877 235 ntBASIC-0.65□□□□□ -2.51
TNFP01375 AC144521.1-201ENST00000607148 956 ntBASIC-0.65□□□□□ -2.51
TNFP01375 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.65□□□□□ -2.51
TNFP01375 AC008250.2-201ENST00000615261 205 ntBASIC-0.65□□□□□ -2.51
TNFP01375 AL162726.3-218ENST00000636401 95 ntBASIC-0.65□□□□□ -2.51
TNFP01375 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.66□□□□□ -2.52
TNFP01375 RNU6-39P-201ENST00000384344 107 ntBASIC-0.66□□□□□ -2.52
TNFP01375 RNU6-769P-201ENST00000384407 104 ntBASIC-0.66□□□□□ -2.52
TNFP01375 MIR635-201ENST00000384830 98 ntBASIC-0.66□□□□□ -2.52
TNFP01375 MIR802-201ENST00000390235 94 ntBASIC-0.66□□□□□ -2.52
TNFP01375 MIR891A-201ENST00000401237 79 ntBASIC-0.66□□□□□ -2.52
TNFP01375 AL355143.1-201ENST00000407101 841 ntBASIC-0.66□□□□□ -2.52
TNFP01375 AL365184.2-201ENST00000431139 435 ntBASIC-0.66□□□□□ -2.52
TNFP01375 MTND1P4-201ENST00000435196 415 ntBASIC-0.66□□□□□ -2.52
TNFP01375 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.66□□□□□ -2.52
TNFP01375 ADI1P3-201ENST00000549509 470 ntBASIC-0.66□□□□□ -2.52
TNFP01375 AC008521.1-201ENST00000587471 187 ntBASIC-0.66□□□□□ -2.52
TNFP01375 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.67□□□□□ -2.52
TNFP01375 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.67□□□□□ -2.52
TNFP01375 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.67□□□□□ -2.52
TNFP01375 RNU6-354P-201ENST00000383862 107 ntBASIC-0.67□□□□□ -2.52
TNFP01375 RNU6-610P-201ENST00000384264 107 ntBASIC-0.67□□□□□ -2.52
TNFP01375 AC114491.1-201ENST00000416095 246 ntBASIC-0.67□□□□□ -2.52
TNFP01375 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.67□□□□□ -2.52
TNFP01375 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.67□□□□□ -2.52
TNFP01375 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.67□□□□□ -2.52
TNFP01375 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.67□□□□□ -2.52
TNFP01375 AC108059.2-201ENST00000434626 151 ntBASIC-0.67□□□□□ -2.52
TNFP01375 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.67□□□□□ -2.52
TNFP01375 RPS24P1-201ENST00000438550 371 ntBASIC-0.67□□□□□ -2.52
TNFP01375 Z98949.2-201ENST00000440996 144 ntBASIC-0.67□□□□□ -2.52
TNFP01375 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.67□□□□□ -2.52
TNFP01375 AC079781.2-201ENST00000446424 169 ntBASIC-0.67□□□□□ -2.52
TNFP01375 SNORD57-201ENST00000448188 72 ntBASIC-0.67□□□□□ -2.52
TNFP01375 AC074290.1-201ENST00000448883 135 ntBASIC-0.67□□□□□ -2.52
TNFP01375 PCNPP5-201ENST00000452246 481 ntBASIC-0.67□□□□□ -2.52
TNFP01375 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.67□□□□□ -2.52
TNFP01375 snoU13.11-201ENST00000459219 104 ntBASIC-0.67□□□□□ -2.52
TNFP01375 RPS29P27-201ENST00000463711 170 ntBASIC-0.67□□□□□ -2.52
TNFP01375 RNU6-551P-201ENST00000516661 103 ntBASIC-0.67□□□□□ -2.52
TNFP01375 RNA5SP454-201ENST00000517231 127 ntBASIC-0.67□□□□□ -2.52
TNFP01375 AC022616.3-201ENST00000523940 148 ntBASIC-0.67□□□□□ -2.52
TNFP01375 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.67□□□□□ -2.52
TNFP01375 MIR3115-201ENST00000577915 68 ntBASIC-0.67□□□□□ -2.52
TNFP01375 MIR4499-201ENST00000584834 69 ntBASIC-0.67□□□□□ -2.52
TNFP01375 AC026741.1-201ENST00000605892 482 ntBASIC-0.67□□□□□ -2.52
TNFP01375 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.67□□□□□ -2.52
TNFP01375 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.67□□□□□ -2.52
TNFP01375 AC104260.1-201ENST00000616660 539 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms