Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC105758.1-201ENST00000506038 399 ntBASIC1.6□□□□□ -2.15
PDGFBP01127 Y_RNA.702-201ENST00000516843 96 ntBASIC1.6□□□□□ -2.15
PDGFBP01127 AC093027.1-201ENST00000546698 429 ntBASIC1.6□□□□□ -2.15
PDGFBP01127 AC093023.1-201ENST00000547375 507 ntBASIC1.6□□□□□ -2.15
PDGFBP01127 AC004584.2-201ENST00000570407 410 ntBASIC1.6□□□□□ -2.15
PDGFBP01127 AL353770.2-201ENST00000620024 78 ntBASIC1.6□□□□□ -2.15
PDGFBP01127 RNU6-1297P-201ENST00000384415 104 ntBASIC1.59□□□□□ -2.15
PDGFBP01127 MIR548B-201ENST00000385247 97 ntBASIC1.59□□□□□ -2.15
PDGFBP01127 MIR1267-201ENST00000408723 78 ntBASIC1.59□□□□□ -2.15
PDGFBP01127 RNU6-1001P-201ENST00000411265 100 ntBASIC1.59□□□□□ -2.15
PDGFBP01127 AC007098.1-201ENST00000420122 367 ntBASIC1.59□□□□□ -2.15
PDGFBP01127 AC060773.1-201ENST00000421698 310 ntBASIC1.59□□□□□ -2.15
PDGFBP01127 MTND4LP11-201ENST00000422184 280 ntBASIC1.59□□□□□ -2.15
PDGFBP01127 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.59□□□□□ -2.15
PDGFBP01127 AC096644.2-201ENST00000429278 159 ntBASIC1.59□□□□□ -2.15
PDGFBP01127 HMGN2P34-201ENST00000437647 269 ntBASIC1.59□□□□□ -2.15
PDGFBP01127 AC069257.2-201ENST00000441819 155 ntBASIC1.59□□□□□ -2.15
PDGFBP01127 RPL17P19-201ENST00000489069 552 ntBASIC1.59□□□□□ -2.15
PDGFBP01127 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.59□□□□□ -2.15
PDGFBP01127 RNU6-277P-201ENST00000516272 106 ntBASIC1.59□□□□□ -2.15
PDGFBP01127 RNU6-948P-201ENST00000516374 107 ntBASIC1.59□□□□□ -2.15
PDGFBP01127 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.59□□□□□ -2.15
PDGFBP01127 SNORD11B-201ENST00000607707 90 ntBASIC1.59□□□□□ -2.15
PDGFBP01127 AL132765.2-201ENST00000610812 351 ntBASIC1.59□□□□□ -2.15
PDGFBP01127 AC010999.1-201ENST00000611856 324 ntBASIC1.59□□□□□ -2.15
PDGFBP01127 AC126177.8-201ENST00000618339 1015 ntBASIC1.59□□□□□ -2.15
PDGFBP01127 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.16
PDGFBP01127 RNA5SP361-201ENST00000362686 118 ntBASIC1.58□□□□□ -2.16
PDGFBP01127 RNU6-280P-201ENST00000364145 104 ntBASIC1.58□□□□□ -2.16
PDGFBP01127 Y_RNA.387-201ENST00000383918 102 ntBASIC1.58□□□□□ -2.16
PDGFBP01127 RNU6-793P-201ENST00000384233 104 ntBASIC1.58□□□□□ -2.16
PDGFBP01127 MIR1253-201ENST00000408273 105 ntBASIC1.58□□□□□ -2.16
PDGFBP01127 RNA5SP504-201ENST00000410676 117 ntBASIC1.58□□□□□ -2.16
PDGFBP01127 RN7SKP101-201ENST00000411376 320 ntBASIC1.58□□□□□ -2.16
PDGFBP01127 POLR2J4-204ENST00000418424 324 ntBASIC1.58□□□□□ -2.16
PDGFBP01127 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.58□□□□□ -2.16
PDGFBP01127 MTCYBP10-201ENST00000424905 650 ntBASIC1.58□□□□□ -2.16
PDGFBP01127 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.58□□□□□ -2.16
PDGFBP01127 AC114982.1-201ENST00000469402 321 ntBASIC1.58□□□□□ -2.16
PDGFBP01127 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.58□□□□□ -2.16
PDGFBP01127 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.58□□□□□ -2.16
PDGFBP01127 RNU6-970P-201ENST00000516312 107 ntBASIC1.58□□□□□ -2.16
PDGFBP01127 Y_RNA.675-201ENST00000516389 149 ntBASIC1.58□□□□□ -2.16
PDGFBP01127 RNU6-307P-201ENST00000516743 106 ntBASIC1.58□□□□□ -2.16
PDGFBP01127 RNA5SP481-201ENST00000516814 122 ntBASIC1.58□□□□□ -2.16
PDGFBP01127 AC005899.2-201ENST00000584353 90 ntBASIC1.58□□□□□ -2.16
PDGFBP01127 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.58□□□□□ -2.16
PDGFBP01127 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.58□□□□□ -2.16
PDGFBP01127 AC025253.1-201ENST00000613623 543 ntBASIC1.58□□□□□ -2.16
PDGFBP01127 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.58□□□□□ -2.16
PDGFBP01127 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
PDGFBP01127 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
PDGFBP01127 Y_RNA.36-201ENST00000362602 112 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 RNU1-96P-201ENST00000364163 162 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 RNU6-1019P-201ENST00000364424 107 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 RNU6-926P-201ENST00000384075 107 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 RNU6-439P-201ENST00000384188 106 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 RNU6-975P-201ENST00000384296 105 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 RNU6-296P-201ENST00000384608 107 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 RNU6-417P-201ENST00000384712 107 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 RNU6-360P-201ENST00000390944 104 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 RNU6-1156P-201ENST00000410365 100 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 AC114482.1-201ENST00000418010 247 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.57□□□□□ -2.16
PDGFBP01127 AC074290.1-201ENST00000448883 135 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 Y_RNA.632-201ENST00000459189 102 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 AC067942.3-201ENST00000512025 362 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 AC011406.1-201ENST00000512440 370 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 RNU6-856P-201ENST00000516959 98 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 MIR5701-3-201ENST00000578890 82 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 MIR5701-1-201ENST00000585138 82 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.57□□□□□ -2.16
PDGFBP01127 MIR5701-2-201ENST00000615634 82 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.57□□□□□ -2.16
PDGFBP01127 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.57□□□□□ -2.16
PDGFBP01127 RNU1-22P-201ENST00000363334 158 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 SNORD115-8-201ENST00000363856 82 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 Y_RNA.205-201ENST00000364128 113 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 SNORD115-38-201ENST00000365037 82 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 Y_RNA.314-201ENST00000365114 102 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 Y_RNA.364-201ENST00000365532 101 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 RNU6-281P-201ENST00000384212 103 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 MIR520E-201ENST00000384867 87 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 Y_RNA.605-201ENST00000410577 105 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 RNU2-7P-201ENST00000410794 178 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 MRPS18CP6-201ENST00000423587 223 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.56□□□□□ -2.16
PDGFBP01127 RPS29P1-201ENST00000465274 159 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 RNU6-470P-201ENST00000515954 104 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 Y_RNA.661-201ENST00000516003 99 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 RNU6-1114P-201ENST00000516022 107 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.56□□□□□ -2.16
PDGFBP01127 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.56□□□□□ -2.16
PDGFBP01127 AL353149.1-201ENST00000610667 244 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 AC068205.3-201ENST00000636385 468 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.56□□□□□ -2.16
PDGFBP01127 AC010615.1-201ENST00000594254 1764 ntBASIC1.56□□□□□ -2.16
PDGFBP01127 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
PDGFBP01127 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PDGFBP01127 RNU1-62P-201ENST00000362599 164 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms