Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 Y_RNA.269-201ENST00000364685 89 ntBASIC0.63□□□□□ -2.31
SNX4O95219 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.63□□□□□ -2.31
SNX4O95219 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.63□□□□□ -2.31
SNX4O95219 AC104332.1-201ENST00000440471 797 ntBASIC0.63□□□□□ -2.31
SNX4O95219 AC083798.1-201ENST00000472671 131 ntBASIC0.63□□□□□ -2.31
SNX4O95219 AC097462.1-201ENST00000514125 324 ntBASIC0.63□□□□□ -2.31
SNX4O95219 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.63□□□□□ -2.31
SNX4O95219 7SK.7-201ENST00000603504 247 ntBASIC0.63□□□□□ -2.31
SNX4O95219 ELL2P3-201ENST00000457883 1602 ntBASIC0.63□□□□□ -2.31
SNX4O95219 Y_RNA.355-201ENST00000365462 98 ntBASIC0.62□□□□□ -2.31
SNX4O95219 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
SNX4O95219 RNU6-159P-201ENST00000391080 106 ntBASIC0.62□□□□□ -2.31
SNX4O95219 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.62□□□□□ -2.31
SNX4O95219 AL035398.1-201ENST00000430869 322 ntBASIC0.62□□□□□ -2.31
SNX4O95219 USP9YP29-201ENST00000445112 563 ntBASIC0.62□□□□□ -2.31
SNX4O95219 AC117454.1-201ENST00000491120 168 ntBASIC0.62□□□□□ -2.31
SNX4O95219 MTCO2P30-201ENST00000503662 364 ntBASIC0.62□□□□□ -2.31
SNX4O95219 RN7SKP298-201ENST00000515950 94 ntBASIC0.62□□□□□ -2.31
SNX4O95219 SNORD111.1-201ENST00000516421 86 ntBASIC0.62□□□□□ -2.31
SNX4O95219 AC022868.1-201ENST00000517767 391 ntBASIC0.62□□□□□ -2.31
SNX4O95219 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.62□□□□□ -2.31
SNX4O95219 AC027419.1-201ENST00000522976 328 ntBASIC0.62□□□□□ -2.31
SNX4O95219 MIR3684-201ENST00000579779 74 ntBASIC0.62□□□□□ -2.31
SNX4O95219 AP001330.5-201ENST00000607176 411 ntBASIC0.62□□□□□ -2.31
SNX4O95219 FAM157A-202ENST00000615155 405 ntBASIC0.62□□□□□ -2.31
SNX4O95219 RMST_2.1-201ENST00000617263 136 ntBASIC0.62□□□□□ -2.31
SNX4O95219 AL158209.2-201ENST00000619266 216 ntBASIC0.62□□□□□ -2.31
SNX4O95219 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.62□□□□□ -2.31
SNX4O95219 AC023934.1-201ENST00000574529 2389 ntBASIC0.62□□□□□ -2.31
SNX4O95219 RNU6-1322P-201ENST00000364309 107 ntBASIC0.61□□□□□ -2.31
SNX4O95219 Y_RNA.508-201ENST00000384502 114 ntBASIC0.61□□□□□ -2.31
SNX4O95219 Z82188.1-201ENST00000436709 154 ntBASIC0.61□□□□□ -2.31
SNX4O95219 AC093019.1-201ENST00000443135 252 ntBASIC0.61□□□□□ -2.31
SNX4O95219 PCMTD1P1-201ENST00000455560 355 ntBASIC0.61□□□□□ -2.31
SNX4O95219 U7.7-201ENST00000459276 60 ntBASIC0.61□□□□□ -2.31
SNX4O95219 snoU13.18-201ENST00000459483 104 ntBASIC0.61□□□□□ -2.31
SNX4O95219 AC098869.1-201ENST00000481627 292 ntBASIC0.61□□□□□ -2.31
SNX4O95219 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.61□□□□□ -2.31
SNX4O95219 AC093303.1-201ENST00000514549 295 ntBASIC0.61□□□□□ -2.31
SNX4O95219 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
SNX4O95219 Y_RNA.267-201ENST00000364679 109 ntBASIC0.6□□□□□ -2.31
SNX4O95219 RNU4-20P-201ENST00000365601 151 ntBASIC0.6□□□□□ -2.31
SNX4O95219 Y_RNA.481-201ENST00000384373 102 ntBASIC0.6□□□□□ -2.31
SNX4O95219 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.6□□□□□ -2.31
SNX4O95219 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.6□□□□□ -2.31
SNX4O95219 POLR3GP2-201ENST00000588366 668 ntBASIC0.6□□□□□ -2.31
SNX4O95219 AL117336.2-201ENST00000602435 335 ntBASIC0.6□□□□□ -2.31
SNX4O95219 AL096861.1-201ENST00000610899 123 ntBASIC0.6□□□□□ -2.31
SNX4O95219 AL442644.1-201ENST00000454390 3105 ntBASIC0.6□□□□□ -2.31
SNX4O95219 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SNX4O95219 Y_RNA.167-201ENST00000363735 109 ntBASIC0.59□□□□□ -2.31
SNX4O95219 MIR10B-201ENST00000385011 110 ntBASIC0.59□□□□□ -2.31
SNX4O95219 RNU4-55P-201ENST00000410731 137 ntBASIC0.59□□□□□ -2.31
SNX4O95219 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.59□□□□□ -2.31
SNX4O95219 DAP3P1-201ENST00000441522 278 ntBASIC0.59□□□□□ -2.31
SNX4O95219 MTND3P16-201ENST00000452205 344 ntBASIC0.59□□□□□ -2.31
SNX4O95219 Y_RNA.695-201ENST00000516715 107 ntBASIC0.59□□□□□ -2.31
SNX4O95219 DEFB108E-201ENST00000524692 240 ntBASIC0.59□□□□□ -2.31
SNX4O95219 AC104383.1-201ENST00000530297 370 ntBASIC0.59□□□□□ -2.31
SNX4O95219 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
SNX4O95219 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.59□□□□□ -2.31
SNX4O95219 MIR4714-201ENST00000580728 77 ntBASIC0.59□□□□□ -2.31
SNX4O95219 AC022709.1-201ENST00000615967 87 ntBASIC0.59□□□□□ -2.31
SNX4O95219 uc_338.17-201ENST00000619633 179 ntBASIC0.59□□□□□ -2.31
SNX4O95219 AC009248.2-201ENST00000619826 254 ntBASIC0.59□□□□□ -2.31
SNX4O95219 AC005592.1-201ENST00000566527 1640 ntBASIC0.59□□□□□ -2.32
SNX4O95219 SNORA69-201ENST00000383895 132 ntBASIC0.58□□□□□ -2.32
SNX4O95219 MIR514A2-201ENST00000385131 88 ntBASIC0.58□□□□□ -2.32
SNX4O95219 MIR514A3-201ENST00000385132 88 ntBASIC0.58□□□□□ -2.32
SNX4O95219 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.58□□□□□ -2.32
SNX4O95219 RNU7-187P-201ENST00000458985 68 ntBASIC0.58□□□□□ -2.32
SNX4O95219 AC004812.1-201ENST00000540773 146 ntBASIC0.58□□□□□ -2.32
SNX4O95219 MTATP6P24-201ENST00000576835 677 ntBASIC0.58□□□□□ -2.32
SNX4O95219 AC073114.1-201ENST00000612027 490 ntBASIC0.58□□□□□ -2.32
SNX4O95219 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
SNX4O95219 SNORA1B-201ENST00000362535 133 ntBASIC0.57□□□□□ -2.32
SNX4O95219 Y_RNA.354-201ENST00000365448 111 ntBASIC0.57□□□□□ -2.32
SNX4O95219 MIR891A-201ENST00000401237 79 ntBASIC0.57□□□□□ -2.32
SNX4O95219 AC091021.1-201ENST00000468051 388 ntBASIC0.57□□□□□ -2.32
SNX4O95219 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.57□□□□□ -2.32
SNX4O95219 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.57□□□□□ -2.32
SNX4O95219 ACA59.1-201ENST00000515966 143 ntBASIC0.57□□□□□ -2.32
SNX4O95219 RNU6-107P-201ENST00000516643 102 ntBASIC0.57□□□□□ -2.32
SNX4O95219 AC091178.2-201ENST00000584401 117 ntBASIC0.57□□□□□ -2.32
SNX4O95219 Z83818.1-201ENST00000603584 150 ntBASIC0.57□□□□□ -2.32
SNX4O95219 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.57□□□□□ -2.32
SNX4O95219 MIRLET7C-201ENST00000362160 84 ntBASIC0.56□□□□□ -2.32
SNX4O95219 RNA5SP264-201ENST00000363115 107 ntBASIC0.56□□□□□ -2.32
SNX4O95219 RNU6-833P-201ENST00000363486 107 ntBASIC0.56□□□□□ -2.32
SNX4O95219 RNU6-376P-201ENST00000384731 106 ntBASIC0.56□□□□□ -2.32
SNX4O95219 MTCYBP4-201ENST00000401524 249 ntBASIC0.56□□□□□ -2.32
SNX4O95219 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.56□□□□□ -2.32
SNX4O95219 RNU6-956P-201ENST00000458868 103 ntBASIC0.56□□□□□ -2.32
SNX4O95219 AC134698.4-201ENST00000523451 826 ntBASIC0.56□□□□□ -2.32
SNX4O95219 AL358944.1-201ENST00000528537 144 ntBASIC0.56□□□□□ -2.32
SNX4O95219 AC009229.3-201ENST00000608056 282 ntBASIC0.56□□□□□ -2.32
SNX4O95219 AC010999.1-201ENST00000611856 324 ntBASIC0.56□□□□□ -2.32
SNX4O95219 AL136317.1-201ENST00000612653 226 ntBASIC0.56□□□□□ -2.32
SNX4O95219 Y_RNA.151-201ENST00000363566 112 ntBASIC0.55□□□□□ -2.32
SNX4O95219 Y_RNA.330-201ENST00000365230 109 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms