Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU6-1175P-201ENST00000365200 107 ntBASIC1.93□□□□□ -2.1
PRKNO60260 Y_RNA.462-201ENST00000384268 102 ntBASIC1.93□□□□□ -2.1
PRKNO60260 RNU6-975P-201ENST00000384296 105 ntBASIC1.93□□□□□ -2.1
PRKNO60260 SNORD14D-201ENST00000384390 87 ntBASIC1.93□□□□□ -2.1
PRKNO60260 Y_RNA.570-201ENST00000384750 101 ntBASIC1.93□□□□□ -2.1
PRKNO60260 MIR215-201ENST00000384858 110 ntBASIC1.93□□□□□ -2.1
PRKNO60260 MIR504-201ENST00000385065 83 ntBASIC1.93□□□□□ -2.1
PRKNO60260 SNORD115-46-201ENST00000390982 71 ntBASIC1.93□□□□□ -2.1
PRKNO60260 RNU6-57P-201ENST00000411348 103 ntBASIC1.93□□□□□ -2.1
PRKNO60260 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.93□□□□□ -2.1
PRKNO60260 AC074290.1-201ENST00000448883 135 ntBASIC1.93□□□□□ -2.1
PRKNO60260 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.93□□□□□ -2.1
PRKNO60260 AC025465.3-201ENST00000510570 311 ntBASIC1.93□□□□□ -2.1
PRKNO60260 RNU7-110P-201ENST00000516891 62 ntBASIC1.93□□□□□ -2.1
PRKNO60260 RNU6-570P-201ENST00000517051 105 ntBASIC1.93□□□□□ -2.1
PRKNO60260 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.93□□□□□ -2.1
PRKNO60260 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.93□□□□□ -2.1
PRKNO60260 NDUFA5P6-201ENST00000542110 379 ntBASIC1.93□□□□□ -2.1
PRKNO60260 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.93□□□□□ -2.1
PRKNO60260 AC011373.1-201ENST00000607270 237 ntBASIC1.93□□□□□ -2.1
PRKNO60260 AC022202.1-201ENST00000613515 211 ntBASIC1.93□□□□□ -2.1
PRKNO60260 AC012640.5-201ENST00000623897 319 ntBASIC1.93□□□□□ -2.1
PRKNO60260 MIR219B-201ENST00000637023 88 ntBASIC1.93□□□□□ -2.1
PRKNO60260 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
PRKNO60260 Y_RNA.101-201ENST00000363154 102 ntBASIC1.92□□□□□ -2.1
PRKNO60260 SNORD113-8-201ENST00000363497 74 ntBASIC1.92□□□□□ -2.1
PRKNO60260 Y_RNA.230-201ENST00000364348 109 ntBASIC1.92□□□□□ -2.1
PRKNO60260 Y_RNA.332-201ENST00000365271 113 ntBASIC1.92□□□□□ -2.1
PRKNO60260 Y_RNA.396-201ENST00000383949 103 ntBASIC1.92□□□□□ -2.1
PRKNO60260 Y_RNA.401-201ENST00000383965 117 ntBASIC1.92□□□□□ -2.1
PRKNO60260 RNU6-1310P-201ENST00000384153 107 ntBASIC1.92□□□□□ -2.1
PRKNO60260 SNORD63-201ENST00000384262 68 ntBASIC1.92□□□□□ -2.1
PRKNO60260 RNU6-472P-201ENST00000384299 107 ntBASIC1.92□□□□□ -2.1
PRKNO60260 RNU5A-5P-201ENST00000411054 116 ntBASIC1.92□□□□□ -2.1
PRKNO60260 AC123900.1-201ENST00000420390 96 ntBASIC1.92□□□□□ -2.1
PRKNO60260 AC139712.2-201ENST00000424302 339 ntBASIC1.92□□□□□ -2.1
PRKNO60260 TOMM22P2-201ENST00000430735 237 ntBASIC1.92□□□□□ -2.1
PRKNO60260 NDUFB4P10-201ENST00000452541 359 ntBASIC1.92□□□□□ -2.1
PRKNO60260 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.92□□□□□ -2.1
PRKNO60260 AC010531.2-201ENST00000465012 153 ntBASIC1.92□□□□□ -2.1
PRKNO60260 RNU6-237P-201ENST00000515985 71 ntBASIC1.92□□□□□ -2.1
PRKNO60260 Y_RNA.668-201ENST00000516233 93 ntBASIC1.92□□□□□ -2.1
PRKNO60260 IGKV3-31-201ENST00000523109 329 ntBASIC1.92□□□□□ -2.1
PRKNO60260 CYCSP26-201ENST00000534107 320 ntBASIC1.92□□□□□ -2.1
PRKNO60260 MIR4524B-201ENST00000581569 115 ntBASIC1.92□□□□□ -2.1
PRKNO60260 SNORD14A-201ENST00000606526 91 ntBASIC1.92□□□□□ -2.1
PRKNO60260 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.92□□□□□ -2.1
PRKNO60260 MIR8062-201ENST00000621515 85 ntBASIC1.92□□□□□ -2.1
PRKNO60260 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PRKNO60260 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PRKNO60260 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PRKNO60260 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.92□□□□□ -2.1
PRKNO60260 AC245060.5-201ENST00000610778 3293 ntBASIC1.91□□□□□ -2.1
PRKNO60260 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PRKNO60260 SNORD115-3-201ENST00000363100 82 ntBASIC1.91□□□□□ -2.1
PRKNO60260 SNORA3A-201ENST00000364113 130 ntBASIC1.91□□□□□ -2.1
PRKNO60260 RNU6-454P-201ENST00000364292 107 ntBASIC1.91□□□□□ -2.1
PRKNO60260 RNU1-148P-201ENST00000384472 162 ntBASIC1.91□□□□□ -2.1
PRKNO60260 RNU6-102P-201ENST00000384485 104 ntBASIC1.91□□□□□ -2.1
PRKNO60260 Y_RNA.556-201ENST00000384677 113 ntBASIC1.91□□□□□ -2.1
PRKNO60260 RNU6-21P-201ENST00000384710 107 ntBASIC1.91□□□□□ -2.1
PRKNO60260 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
PRKNO60260 MIR1262-201ENST00000408276 93 ntBASIC1.91□□□□□ -2.1
PRKNO60260 MIR1185-2-201ENST00000408687 86 ntBASIC1.91□□□□□ -2.1
PRKNO60260 SRIP3-201ENST00000413200 219 ntBASIC1.91□□□□□ -2.1
PRKNO60260 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.91□□□□□ -2.1
PRKNO60260 AL445646.1-201ENST00000431784 216 ntBASIC1.91□□□□□ -2.1
PRKNO60260 RPL23AP3-201ENST00000453844 468 ntBASIC1.91□□□□□ -2.1
PRKNO60260 RNU6-966P-201ENST00000516479 104 ntBASIC1.91□□□□□ -2.1
PRKNO60260 MIR3126-201ENST00000577443 74 ntBASIC1.91□□□□□ -2.1
PRKNO60260 MIR4423-201ENST00000580922 80 ntBASIC1.91□□□□□ -2.1
PRKNO60260 MIR4769-201ENST00000584126 77 ntBASIC1.91□□□□□ -2.1
PRKNO60260 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.91□□□□□ -2.1
PRKNO60260 snoZ196.1-201ENST00000625269 89 ntBASIC1.91□□□□□ -2.1
PRKNO60260 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.91□□□□□ -2.1
PRKNO60260 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.91□□□□□ -2.1
PRKNO60260 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
PRKNO60260 MIR410-201ENST00000362222 80 ntBASIC1.9□□□□□ -2.11
PRKNO60260 snoU2_19.2-201ENST00000363024 80 ntBASIC1.9□□□□□ -2.11
PRKNO60260 Y_RNA.286-201ENST00000364813 102 ntBASIC1.9□□□□□ -2.11
PRKNO60260 Y_RNA.331-201ENST00000365267 102 ntBASIC1.9□□□□□ -2.11
PRKNO60260 SNORA6-201ENST00000384033 151 ntBASIC1.9□□□□□ -2.11
PRKNO60260 Y_RNA.461-201ENST00000384263 103 ntBASIC1.9□□□□□ -2.11
PRKNO60260 SNORD23.1-201ENST00000408212 104 ntBASIC1.9□□□□□ -2.11
PRKNO60260 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PRKNO60260 RPL23AP7-203ENST00000449021 469 ntBASIC1.9□□□□□ -2.11
PRKNO60260 Y_RNA.638-201ENST00000459374 113 ntBASIC1.9□□□□□ -2.11
PRKNO60260 snoU13.15-201ENST00000459407 104 ntBASIC1.9□□□□□ -2.11
PRKNO60260 RNU6-155P-201ENST00000516347 100 ntBASIC1.9□□□□□ -2.11
PRKNO60260 RNU6-948P-201ENST00000516374 107 ntBASIC1.9□□□□□ -2.11
PRKNO60260 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.9□□□□□ -2.11
PRKNO60260 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.9□□□□□ -2.11
PRKNO60260 AC006006.1-201ENST00000603082 144 ntBASIC1.9□□□□□ -2.11
PRKNO60260 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.9□□□□□ -2.11
PRKNO60260 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.9□□□□□ -2.11
PRKNO60260 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.9□□□□□ -2.11
PRKNO60260 MIR340-201ENST00000362125 95 ntBASIC1.89□□□□□ -2.11
PRKNO60260 SNORD114-1-201ENST00000362705 72 ntBASIC1.89□□□□□ -2.11
PRKNO60260 Y_RNA.376-201ENST00000365638 108 ntBASIC1.89□□□□□ -2.11
PRKNO60260 Y_RNA.446-201ENST00000384178 104 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms