Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 AL445305.1-201ENST00000432577 575 ntBASIC1.27□□□□□ -2.21
VEGFDO43915 AL606517.2-201ENST00000442855 241 ntBASIC1.27□□□□□ -2.21
VEGFDO43915 UBE2V1P7-201ENST00000446395 340 ntBASIC1.27□□□□□ -2.21
VEGFDO43915 SNORD65B-201ENST00000459126 73 ntBASIC1.27□□□□□ -2.21
VEGFDO43915 AC019288.1-201ENST00000557918 224 ntBASIC1.27□□□□□ -2.21
VEGFDO43915 FRG2DP-202ENST00000566967 323 ntBASIC1.27□□□□□ -2.21
VEGFDO43915 MIR4790-201ENST00000577799 79 ntBASIC1.27□□□□□ -2.21
VEGFDO43915 AC073349.3-201ENST00000617616 186 ntBASIC1.27□□□□□ -2.21
VEGFDO43915 MIR3688-2-201ENST00000636963 87 ntBASIC1.27□□□□□ -2.21
VEGFDO43915 AC018630.2-201ENST00000534866 2403 ntBASIC1.27□□□□□ -2.21
VEGFDO43915 Y_RNA.301-201ENST00000364990 103 ntBASIC1.26□□□□□ -2.21
VEGFDO43915 RNU6-700P-201ENST00000391043 107 ntBASIC1.26□□□□□ -2.21
VEGFDO43915 MTCO3P19-201ENST00000415864 321 ntBASIC1.26□□□□□ -2.21
VEGFDO43915 USP9YP30-201ENST00000430729 455 ntBASIC1.26□□□□□ -2.21
VEGFDO43915 AC005002.2-201ENST00000438228 269 ntBASIC1.26□□□□□ -2.21
VEGFDO43915 RPS27P22-201ENST00000478056 241 ntBASIC1.26□□□□□ -2.21
VEGFDO43915 RNU6-107P-201ENST00000516643 102 ntBASIC1.26□□□□□ -2.21
VEGFDO43915 SUMO2P16-201ENST00000519475 264 ntBASIC1.26□□□□□ -2.21
VEGFDO43915 RPL21P9-201ENST00000556149 474 ntBASIC1.26□□□□□ -2.21
VEGFDO43915 AC008269.2-201ENST00000561915 1105 ntBASIC1.26□□□□□ -2.21
VEGFDO43915 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
VEGFDO43915 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
VEGFDO43915 RNU6-1264P-201ENST00000383891 107 ntBASIC1.25□□□□□ -2.21
VEGFDO43915 SNORA70.7-201ENST00000384159 133 ntBASIC1.25□□□□□ -2.21
VEGFDO43915 AC093023.1-201ENST00000547375 507 ntBASIC1.25□□□□□ -2.21
VEGFDO43915 AL513534.2-201ENST00000603836 250 ntBASIC1.25□□□□□ -2.21
VEGFDO43915 AC073413.2-201ENST00000604332 360 ntBASIC1.25□□□□□ -2.21
VEGFDO43915 AC090517.2-201ENST00000614966 680 ntBASIC1.25□□□□□ -2.21
VEGFDO43915 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
VEGFDO43915 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
VEGFDO43915 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
VEGFDO43915 RNU6-1215P-201ENST00000384441 102 ntBASIC1.24□□□□□ -2.21
VEGFDO43915 SNORD116-4-201ENST00000384733 96 ntBASIC1.24□□□□□ -2.21
VEGFDO43915 MIR190B-201ENST00000401119 79 ntBASIC1.24□□□□□ -2.21
VEGFDO43915 AC074133.1-201ENST00000515696 183 ntBASIC1.24□□□□□ -2.21
VEGFDO43915 RNU7-28P-201ENST00000516759 62 ntBASIC1.24□□□□□ -2.21
VEGFDO43915 AC091144.1-201ENST00000519573 138 ntBASIC1.24□□□□□ -2.21
VEGFDO43915 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.24□□□□□ -2.21
VEGFDO43915 AC018638.8-201ENST00000588755 281 ntBASIC1.24□□□□□ -2.21
VEGFDO43915 SNORD3E-202ENST00000627253 216 ntBASIC1.24□□□□□ -2.21
VEGFDO43915 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.23□□□□□ -2.21
VEGFDO43915 Y_RNA.6-201ENST00000362350 114 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 Y_RNA.106-201ENST00000363189 100 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 Y_RNA.364-201ENST00000365532 101 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 RNU6-842P-201ENST00000384269 107 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 Y_RNA.516-201ENST00000384541 124 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 MIR660-201ENST00000385235 97 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 RNU6-1148P-201ENST00000410992 104 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 MTCYBP10-201ENST00000424905 650 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 SUMO1P2-201ENST00000452524 304 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 AC010469.2-201ENST00000496412 480 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 MTND5P5-201ENST00000503764 376 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 RNU4-49P-201ENST00000516080 140 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 RNU6-1016P-201ENST00000516689 94 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 AC068338.1-201ENST00000565567 176 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.23□□□□□ -2.21
VEGFDO43915 MIR5701-3-201ENST00000578890 82 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.23□□□□□ -2.21
VEGFDO43915 MIR5701-1-201ENST00000585138 82 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 AC018462.2-201ENST00000605375 395 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 AL021879.1-201ENST00000611756 288 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 MIR5701-2-201ENST00000615634 82 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.23□□□□□ -2.21
VEGFDO43915 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
VEGFDO43915 Y_RNA.318-201ENST00000365131 97 ntBASIC1.22□□□□□ -2.21
VEGFDO43915 MIR1277-201ENST00000408536 78 ntBASIC1.22□□□□□ -2.21
VEGFDO43915 AC074085.1-201ENST00000413598 418 ntBASIC1.22□□□□□ -2.21
VEGFDO43915 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.22□□□□□ -2.21
VEGFDO43915 RNU6-329P-201ENST00000459618 107 ntBASIC1.22□□□□□ -2.21
VEGFDO43915 AC097462.1-201ENST00000514125 324 ntBASIC1.22□□□□□ -2.21
VEGFDO43915 CBX3P8-201ENST00000532412 525 ntBASIC1.22□□□□□ -2.21
VEGFDO43915 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.22□□□□□ -2.21
VEGFDO43915 MIR6079-201ENST00000635807 62 ntBASIC1.22□□□□□ -2.21
VEGFDO43915 MTND5P16-201ENST00000460269 1703 ntBASIC1.22□□□□□ -2.21
VEGFDO43915 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
VEGFDO43915 RNU4-76P-201ENST00000364509 141 ntBASIC1.21□□□□□ -2.22
VEGFDO43915 SNORD115-47-201ENST00000391226 86 ntBASIC1.21□□□□□ -2.22
VEGFDO43915 EIF1P2-201ENST00000428233 350 ntBASIC1.21□□□□□ -2.22
VEGFDO43915 UQCRBP2-201ENST00000447827 297 ntBASIC1.21□□□□□ -2.22
VEGFDO43915 RNU6-307P-201ENST00000516743 106 ntBASIC1.21□□□□□ -2.22
VEGFDO43915 RNU7-172P-201ENST00000517125 64 ntBASIC1.21□□□□□ -2.22
VEGFDO43915 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.21□□□□□ -2.22
VEGFDO43915 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.21□□□□□ -2.22
VEGFDO43915 AC091895.1-201ENST00000624494 256 ntBASIC1.21□□□□□ -2.22
VEGFDO43915 RNU6-1059P-201ENST00000363752 98 ntBASIC1.2□□□□□ -2.22
VEGFDO43915 RPS29P29-201ENST00000456396 171 ntBASIC1.2□□□□□ -2.22
VEGFDO43915 HMGN1P7-201ENST00000491722 313 ntBASIC1.2□□□□□ -2.22
VEGFDO43915 RNU7-40P-201ENST00000516397 64 ntBASIC1.2□□□□□ -2.22
VEGFDO43915 Y_RNA.682-201ENST00000516457 100 ntBASIC1.2□□□□□ -2.22
VEGFDO43915 AC105029.1-201ENST00000520250 669 ntBASIC1.2□□□□□ -2.22
VEGFDO43915 AC023157.2-201ENST00000540596 141 ntBASIC1.2□□□□□ -2.22
VEGFDO43915 AC005899.2-201ENST00000584353 90 ntBASIC1.2□□□□□ -2.22
VEGFDO43915 AC104260.1-201ENST00000616660 539 ntBASIC1.2□□□□□ -2.22
VEGFDO43915 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
VEGFDO43915 MIR410-201ENST00000362222 80 ntBASIC1.19□□□□□ -2.22
VEGFDO43915 RNU6-222P-201ENST00000362438 107 ntBASIC1.19□□□□□ -2.22
VEGFDO43915 RNU1-22P-201ENST00000363334 158 ntBASIC1.19□□□□□ -2.22
VEGFDO43915 RNU4-40P-201ENST00000364351 143 ntBASIC1.19□□□□□ -2.22
VEGFDO43915 MIR329-1-201ENST00000385028 80 ntBASIC1.19□□□□□ -2.22
VEGFDO43915 STAG3L5P-204ENST00000443759 179 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms