Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 RNU6-947P-201ENST00000516264 106 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.79□□□□□ -2.28
CLOCKO15516 AL512360.1-201ENST00000555346 234 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 UBL5P4-201ENST00000562584 236 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 MIR3973-201ENST00000579824 107 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 7SK.7-201ENST00000603504 247 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 AC080078.2-201ENST00000603766 501 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 AL357312.1-201ENST00000603879 298 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 AL138726.1-201ENST00000614873 333 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 MIR6079-201ENST00000635807 62 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CLOCKO15516 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.78□□□□□ -2.28
CLOCKO15516 Y_RNA.184-201ENST00000363884 108 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 SNORA2.2-201ENST00000365473 135 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 Y_RNA.363-201ENST00000365529 113 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 RNU6-424P-201ENST00000384367 105 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 SNORA80D-201ENST00000384488 135 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 MIR200A-201ENST00000384875 90 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 MIR517A-201ENST00000385001 87 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 AF228730.1-201ENST00000397972 663 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 AL355796.1-201ENST00000406706 323 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 AL590632.1-201ENST00000424289 371 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.78□□□□□ -2.28
CLOCKO15516 AC010469.2-201ENST00000496412 480 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 PDCD5P2-201ENST00000507570 312 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 AC010598.1-201ENST00000510378 103 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 Y_RNA.665-201ENST00000516177 98 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 RNU6-405P-201ENST00000516637 110 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 AL590705.4-201ENST00000532209 134 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 AC023157.2-201ENST00000540596 141 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 AL121579.1-201ENST00000555129 305 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 MTND1P15-201ENST00000579262 949 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 MIR3611-201ENST00000584484 83 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 AC010525.2-201ENST00000590920 195 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 FAM71BP1-201ENST00000604431 523 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 DISC2.1-201ENST00000612827 205 ntBASIC0.78□□□□□ -2.28
CLOCKO15516 MIR373-201ENST00000362273 69 ntBASIC0.77□□□□□ -2.29
CLOCKO15516 Y_RNA.265-201ENST00000364677 108 ntBASIC0.77□□□□□ -2.29
CLOCKO15516 MTCO3P19-201ENST00000415864 321 ntBASIC0.77□□□□□ -2.29
CLOCKO15516 CALM2P4-201ENST00000430810 426 ntBASIC0.77□□□□□ -2.29
CLOCKO15516 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.77□□□□□ -2.29
CLOCKO15516 RPL39P39-201ENST00000455840 151 ntBASIC0.77□□□□□ -2.29
CLOCKO15516 RNU6-917P-201ENST00000516294 104 ntBASIC0.77□□□□□ -2.29
CLOCKO15516 RNU7-28P-201ENST00000516759 62 ntBASIC0.77□□□□□ -2.29
CLOCKO15516 AC027419.1-201ENST00000522976 328 ntBASIC0.77□□□□□ -2.29
CLOCKO15516 AC134698.4-201ENST00000523451 826 ntBASIC0.77□□□□□ -2.29
CLOCKO15516 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.77□□□□□ -2.29
CLOCKO15516 MIR5696-201ENST00000578474 85 ntBASIC0.77□□□□□ -2.29
CLOCKO15516 AC010620.1-201ENST00000601088 1102 ntBASIC0.77□□□□□ -2.29
CLOCKO15516 AC019193.3-201ENST00000609144 554 ntBASIC0.77□□□□□ -2.29
CLOCKO15516 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.77□□□□□ -2.29
CLOCKO15516 AC022709.1-201ENST00000615967 87 ntBASIC0.77□□□□□ -2.29
CLOCKO15516 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.77□□□□□ -2.29
CLOCKO15516 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.77□□□□□ -2.29
CLOCKO15516 HSBP1P2-201ENST00000299671 229 ntBASIC0.76□□□□□ -2.29
CLOCKO15516 RNU6-1252P-201ENST00000363054 104 ntBASIC0.76□□□□□ -2.29
CLOCKO15516 U8.16-201ENST00000391279 133 ntBASIC0.76□□□□□ -2.29
CLOCKO15516 Y_RNA.615-201ENST00000410769 117 ntBASIC0.76□□□□□ -2.29
CLOCKO15516 AC022493.2-201ENST00000506122 481 ntBASIC0.76□□□□□ -2.29
CLOCKO15516 AC091144.1-201ENST00000519573 138 ntBASIC0.76□□□□□ -2.29
CLOCKO15516 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.76□□□□□ -2.29
CLOCKO15516 MTND3P12-201ENST00000559068 328 ntBASIC0.76□□□□□ -2.29
CLOCKO15516 AL162413.1-201ENST00000603198 110 ntBASIC0.76□□□□□ -2.29
CLOCKO15516 AC124303.1-201ENST00000605703 360 ntBASIC0.76□□□□□ -2.29
CLOCKO15516 AC010999.1-201ENST00000611856 324 ntBASIC0.76□□□□□ -2.29
CLOCKO15516 Y_RNA.530-201ENST00000384587 101 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 MIR562-201ENST00000384894 95 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 MIR10B-201ENST00000385011 110 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 RNU2-66P-201ENST00000410650 161 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 RNU2-64P-201ENST00000411315 191 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.75□□□□□ -2.29
CLOCKO15516 ZNF885P-201ENST00000420174 1098 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 MTCO3P18-201ENST00000440206 761 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 MTND1P26-201ENST00000440488 538 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 RPS26P48-201ENST00000491713 339 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 OR9P1P-201ENST00000496431 281 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 AC097462.1-201ENST00000514125 324 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 RNU7-175P-201ENST00000515915 61 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 RNU6-1281P-201ENST00000516223 105 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 RNU6-256P-201ENST00000516747 97 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 RNU7-172P-201ENST00000517125 64 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.75□□□□□ -2.29
CLOCKO15516 RPL21P9-201ENST00000556149 474 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 CYP3A137P-201ENST00000562436 69 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 AC068790.6-201ENST00000602558 258 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 AC106800.4-201ENST00000614905 153 ntBASIC0.75□□□□□ -2.29
CLOCKO15516 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CLOCKO15516 RNU6-969P-201ENST00000383900 105 ntBASIC0.74□□□□□ -2.29
CLOCKO15516 MIR608-201ENST00000384820 100 ntBASIC0.74□□□□□ -2.29
CLOCKO15516 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.74□□□□□ -2.29
CLOCKO15516 HMGN2P26-201ENST00000463169 339 ntBASIC0.74□□□□□ -2.29
CLOCKO15516 AP000870.1-201ENST00000472927 406 ntBASIC0.74□□□□□ -2.29
CLOCKO15516 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.74□□□□□ -2.29
CLOCKO15516 AC107401.1-201ENST00000503426 685 ntBASIC0.74□□□□□ -2.29
CLOCKO15516 RNU6-107P-201ENST00000516643 102 ntBASIC0.74□□□□□ -2.29
CLOCKO15516 RNU6-197P-201ENST00000516680 100 ntBASIC0.74□□□□□ -2.29
CLOCKO15516 RNU2-56P-201ENST00000516826 190 ntBASIC0.74□□□□□ -2.29
CLOCKO15516 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms