Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-393P-201ENST00000384475 107 ntBASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 MIR450B-201ENST00000401182 78 ntBASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 MTND3P1-201ENST00000441336 220 ntBASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 Y_RNA.638-201ENST00000459374 113 ntBASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 SNORD123-201ENST00000459473 70 ntBASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 AC005178.1-201ENST00000508392 440 ntBASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 HSPE1P23-201ENST00000509838 286 ntBASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 SNORA19.3-201ENST00000516165 130 ntBASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-782P-201ENST00000516852 104 ntBASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 MTCO3P23-201ENST00000561363 289 ntBASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 MIR377-201ENST00000362145 69 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 SNORA1.1-201ENST00000364671 133 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-169P-201ENST00000365336 107 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-396P-201ENST00000365369 105 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-187P-201ENST00000384139 106 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 MIR106A-201ENST00000384870 81 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 SNORD70.1-201ENST00000391007 85 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-269P-201ENST00000391077 97 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 MIR892B-201ENST00000401279 77 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 AC243428.1-201ENST00000421099 264 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 RNU7-159P-201ENST00000459284 62 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 AC010598.1-201ENST00000510378 103 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-848P-201ENST00000515948 107 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-617P-201ENST00000516147 107 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-473P-201ENST00000516164 107 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 AC010376.1-201ENST00000522101 334 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 MTND4LP18-201ENST00000526864 291 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 AL358944.1-201ENST00000528537 144 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 AC133485.4-201ENST00000561835 220 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 AC137590.2-201ENST00000619709 240 ntBASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.53□□□□□ -2.49
TCRBV3S1A0A5B6 MTND4P9-201ENST00000507819 1346 ntBASIC-0.54□□□□□ -2.5
TCRBV3S1A0A5B6 RNU6-161P-201ENST00000363051 106 ntBASIC-0.54□□□□□ -2.5
TCRBV3S1A0A5B6 RNY1-201ENST00000364228 113 ntBASIC-0.54□□□□□ -2.5
TCRBV3S1A0A5B6 RNU6-533P-201ENST00000384144 107 ntBASIC-0.54□□□□□ -2.5
TCRBV3S1A0A5B6 MIR320B2-201ENST00000408479 138 ntBASIC-0.54□□□□□ -2.5
TCRBV3S1A0A5B6 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.54□□□□□ -2.5
TCRBV3S1A0A5B6 MTND1P26-201ENST00000440488 538 ntBASIC-0.54□□□□□ -2.5
TCRBV3S1A0A5B6 AL359672.1-201ENST00000442302 409 ntBASIC-0.54□□□□□ -2.5
TCRBV3S1A0A5B6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.54□□□□□ -2.5
TCRBV3S1A0A5B6 MTND2P32-201ENST00000521584 1038 ntBASIC-0.54□□□□□ -2.5
TCRBV3S1A0A5B6 MIR4775-201ENST00000581168 75 ntBASIC-0.54□□□□□ -2.5
TCRBV3S1A0A5B6 uc_338.6-201ENST00000613544 171 ntBASIC-0.54□□□□□ -2.5
TCRBV3S1A0A5B6 AL139418.1-201ENST00000613613 177 ntBASIC-0.54□□□□□ -2.5
TCRBV3S1A0A5B6 MIR499B-201ENST00000636498 73 ntBASIC-0.54□□□□□ -2.5
TCRBV3S1A0A5B6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.54□□□□□ -2.5
TCRBV3S1A0A5B6 RNU6-434P-201ENST00000384376 107 ntBASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 MT-TN-201ENST00000387400 73 ntBASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 MIR760-201ENST00000390220 80 ntBASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 SNORA26-201ENST00000391286 122 ntBASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 MIR938-201ENST00000401216 83 ntBASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 RNU6-757P-201ENST00000410334 100 ntBASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 RPS27AP14-201ENST00000422868 454 ntBASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 AC079354.2-201ENST00000453523 154 ntBASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 HMGN1P10-201ENST00000474557 553 ntBASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 RNU7-129P-201ENST00000516128 62 ntBASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 AC010525.2-201ENST00000590920 195 ntBASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 MIR7107-201ENST00000611489 80 ntBASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 AC091948.2-201ENST00000636510 279 ntBASIC-0.55□□□□□ -2.5
TCRBV3S1A0A5B6 RNA5SP432-201ENST00000362480 116 ntBASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 RNA5SP275-201ENST00000363936 118 ntBASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 SNORD114-12-201ENST00000365400 75 ntBASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 RNU6-245P-201ENST00000384020 107 ntBASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 MIR1287-201ENST00000408492 90 ntBASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 MTATP6P20-201ENST00000414147 562 ntBASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 BTF3P11-201ENST00000426582 477 ntBASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 AL353572.1-201ENST00000442490 417 ntBASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 FGF7P1-201ENST00000582820 288 ntBASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 AL670379.3-201ENST00000605040 251 ntBASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 RNU6-85P-201ENST00000605989 107 ntBASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 U6.114-201ENST00000636407 96 ntBASIC-0.56□□□□□ -2.5
TCRBV3S1A0A5B6 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 MIR15B-201ENST00000385045 98 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 RNU6-205P-201ENST00000390858 107 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms