Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.61□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AL445685.2-201ENST00000422551 342 ntBASIC1.61□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.61□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AC093852.1-201ENST00000503587 266 ntBASIC1.61□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AC023442.1-201ENST00000531247 422 ntBASIC1.61□□□□□ -2.15
TRBV4-1A0A0J9YWV2 GNAI2P1-201ENST00000541815 315 ntBASIC1.61□□□□□ -2.15
TRBV4-1A0A0J9YWV2 MIR4659A-201ENST00000580269 81 ntBASIC1.61□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AC005828.6-201ENST00000606610 232 ntBASIC1.61□□□□□ -2.15
TRBV4-1A0A0J9YWV2 MIR1302-2-201ENST00000607096 138 ntBASIC1.61□□□□□ -2.15
TRBV4-1A0A0J9YWV2 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.61□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AC240442.1-201ENST00000616055 283 ntBASIC1.61□□□□□ -2.15
TRBV4-1A0A0J9YWV2 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.61□□□□□ -2.15
TRBV4-1A0A0J9YWV2 U6.108-201ENST00000637764 58 ntBASIC1.61□□□□□ -2.15
TRBV4-1A0A0J9YWV2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 Y_RNA.28-201ENST00000362554 111 ntBASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 SNORA63D-201ENST00000364359 132 ntBASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 SNORA72.2-201ENST00000365028 127 ntBASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AL355796.1-201ENST00000406706 323 ntBASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 RNA5SP475-201ENST00000410568 110 ntBASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 RPL23AP6-201ENST00000446637 472 ntBASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AC010598.1-201ENST00000510378 103 ntBASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AC024995.1-201ENST00000523014 93 ntBASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AC084364.2-201ENST00000546924 395 ntBASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AC110588.1-201ENST00000559699 137 ntBASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AC055872.1-201ENST00000570978 278 ntBASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 MIR3122-201ENST00000577243 73 ntBASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AC011476.5-201ENST00000615594 130 ntBASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TRBV4-1A0A0J9YWV2 Y_RNA.148-201ENST00000363557 117 ntBASIC1.59□□□□□ -2.15
TRBV4-1A0A0J9YWV2 Y_RNA.243-201ENST00000364481 109 ntBASIC1.59□□□□□ -2.15
TRBV4-1A0A0J9YWV2 RNA5SP363-201ENST00000365072 115 ntBASIC1.59□□□□□ -2.15
TRBV4-1A0A0J9YWV2 SNORA20B-201ENST00000384220 132 ntBASIC1.59□□□□□ -2.15
TRBV4-1A0A0J9YWV2 RNA5SP467-201ENST00000391274 118 ntBASIC1.59□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AL354751.2-201ENST00000415471 210 ntBASIC1.59□□□□□ -2.15
TRBV4-1A0A0J9YWV2 MTCO2P12-201ENST00000427426 682 ntBASIC1.59□□□□□ -2.15
TRBV4-1A0A0J9YWV2 SNORA25.10-201ENST00000515926 124 ntBASIC1.59□□□□□ -2.15
TRBV4-1A0A0J9YWV2 Y_RNA.711-201ENST00000516993 102 ntBASIC1.59□□□□□ -2.15
TRBV4-1A0A0J9YWV2 RNU7-128P-201ENST00000517247 62 ntBASIC1.59□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AC074050.1-201ENST00000563247 211 ntBASIC1.59□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.59□□□□□ -2.15
TRBV4-1A0A0J9YWV2 MIR4713-201ENST00000582691 75 ntBASIC1.59□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AL121655.1-201ENST00000605811 308 ntBASIC1.59□□□□□ -2.15
TRBV4-1A0A0J9YWV2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.59□□□□□ -2.15
TRBV4-1A0A0J9YWV2 U6.73-201ENST00000619194 103 ntBASIC1.59□□□□□ -2.15
TRBV4-1A0A0J9YWV2 U6.115-201ENST00000636045 103 ntBASIC1.59□□□□□ -2.15
TRBV4-1A0A0J9YWV2 AC010615.1-201ENST00000594254 1764 ntBASIC1.59□□□□□ -2.16
TRBV4-1A0A0J9YWV2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
TRBV4-1A0A0J9YWV2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
TRBV4-1A0A0J9YWV2 AC005592.1-201ENST00000566527 1640 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 AC091812.1-201ENST00000432235 1948 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 AC092881.1-201ENST00000638218 2733 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 Y_RNA.361-201ENST00000365515 120 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 Y_RNA.458-201ENST00000384240 102 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 Y_RNA.526-201ENST00000384572 110 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 MIR548P-201ENST00000408336 84 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 MTCYBP6-201ENST00000441810 138 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 RPS26P45-201ENST00000471748 340 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 RPL23AP63-201ENST00000498752 471 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 Y_RNA.701-201ENST00000516812 110 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 SNORA31.17-201ENST00000516953 127 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 RNU2-12P-201ENST00000517216 168 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 HSBP1P1-201ENST00000555205 166 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 AL137100.2-201ENST00000555786 315 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 AC020661.2-201ENST00000560114 134 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 AL359075.3-201ENST00000613288 217 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 AC004467.1-201ENST00000615678 330 ntBASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TRBV4-1A0A0J9YWV2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 RNU6-626P-201ENST00000363354 107 ntBASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 RNU4-76P-201ENST00000364509 141 ntBASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 RNU6-20P-201ENST00000384106 107 ntBASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 MIR520A-201ENST00000384862 85 ntBASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 Y_RNA.645-201ENST00000391229 102 ntBASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 AC019129.1-201ENST00000403786 261 ntBASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 AC069257.2-201ENST00000441819 155 ntBASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 MRPS10P1-201ENST00000448483 130 ntBASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 SUMO1P2-201ENST00000452524 304 ntBASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 RNA5SP57-201ENST00000459463 123 ntBASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 RNA5SP437-201ENST00000517249 129 ntBASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 AC040926.1-201ENST00000530195 238 ntBASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 MIR4423-201ENST00000580922 80 ntBASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 RPS29P30-201ENST00000600975 111 ntBASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 AC103810.8-201ENST00000607347 118 ntBASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.57□□□□□ -2.16
TRBV4-1A0A0J9YWV2 SNORD114-7-201ENST00000362520 77 ntBASIC1.56□□□□□ -2.16
TRBV4-1A0A0J9YWV2 SNORA27.1-201ENST00000362604 124 ntBASIC1.56□□□□□ -2.16
TRBV4-1A0A0J9YWV2 Y_RNA.101-201ENST00000363154 102 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms