Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 Y_RNA.679-201ENST00000516416 91 ntBASIC3.83□□□□□ -1.8
GTF3C3Q9Y5Q9 MIR6875-201ENST00000617506 72 ntBASIC3.83□□□□□ -1.8
GTF3C3Q9Y5Q9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GTF3C3Q9Y5Q9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.82□□□□□ -1.8
GTF3C3Q9Y5Q9 RNU6-117P-201ENST00000365415 107 ntBASIC3.82□□□□□ -1.8
GTF3C3Q9Y5Q9 SNORA48.1-201ENST00000390879 135 ntBASIC3.82□□□□□ -1.8
GTF3C3Q9Y5Q9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.82□□□□□ -1.8
GTF3C3Q9Y5Q9 AC099677.2-201ENST00000436385 175 ntBASIC3.82□□□□□ -1.8
GTF3C3Q9Y5Q9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.82□□□□□ -1.8
GTF3C3Q9Y5Q9 RNU2-19P-201ENST00000517288 84 ntBASIC3.82□□□□□ -1.8
GTF3C3Q9Y5Q9 ZYXP1-201ENST00000617638 118 ntBASIC3.82□□□□□ -1.8
GTF3C3Q9Y5Q9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
GTF3C3Q9Y5Q9 SNORD27-201ENST00000363981 72 ntBASIC3.81□□□□□ -1.8
GTF3C3Q9Y5Q9 Y_RNA.217-201ENST00000364214 105 ntBASIC3.81□□□□□ -1.8
GTF3C3Q9Y5Q9 Y_RNA.277-201ENST00000364754 102 ntBASIC3.81□□□□□ -1.8
GTF3C3Q9Y5Q9 RNU6-662P-201ENST00000384253 104 ntBASIC3.81□□□□□ -1.8
GTF3C3Q9Y5Q9 RNU6-1289P-201ENST00000384431 106 ntBASIC3.81□□□□□ -1.8
GTF3C3Q9Y5Q9 MIR520G-201ENST00000385064 90 ntBASIC3.81□□□□□ -1.8
GTF3C3Q9Y5Q9 Y_RNA.590-201ENST00000410140 107 ntBASIC3.81□□□□□ -1.8
GTF3C3Q9Y5Q9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.81□□□□□ -1.8
GTF3C3Q9Y5Q9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.81□□□□□ -1.8
GTF3C3Q9Y5Q9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.81□□□□□ -1.8
GTF3C3Q9Y5Q9 AL162725.1-201ENST00000435405 301 ntBASIC3.81□□□□□ -1.8
GTF3C3Q9Y5Q9 Y_RNA.641-201ENST00000459414 105 ntBASIC3.81□□□□□ -1.8
GTF3C3Q9Y5Q9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
GTF3C3Q9Y5Q9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.81□□□□□ -1.8
GTF3C3Q9Y5Q9 MIR3922-201ENST00000585192 84 ntBASIC3.81□□□□□ -1.8
GTF3C3Q9Y5Q9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
GTF3C3Q9Y5Q9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GTF3C3Q9Y5Q9 MIR6073-201ENST00000352083 89 ntBASIC3.8□□□□□ -1.8
GTF3C3Q9Y5Q9 RNU6-899P-201ENST00000363947 107 ntBASIC3.8□□□□□ -1.8
GTF3C3Q9Y5Q9 RNU6-740P-201ENST00000364734 105 ntBASIC3.8□□□□□ -1.8
GTF3C3Q9Y5Q9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.8□□□□□ -1.8
GTF3C3Q9Y5Q9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.8□□□□□ -1.8
GTF3C3Q9Y5Q9 SNORA9.3-201ENST00000516383 129 ntBASIC3.8□□□□□ -1.8
GTF3C3Q9Y5Q9 MIR2116-201ENST00000517221 80 ntBASIC3.8□□□□□ -1.8
GTF3C3Q9Y5Q9 MIR5094-201ENST00000578766 85 ntBASIC3.8□□□□□ -1.8
GTF3C3Q9Y5Q9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.8□□□□□ -1.8
GTF3C3Q9Y5Q9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 Y_RNA.82-201ENST00000363000 102 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 Y_RNA.92-201ENST00000363043 102 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 RNU6-801P-201ENST00000364087 105 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 Y_RNA.235-201ENST00000364412 102 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 Y_RNA.306-201ENST00000365015 102 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 Y_RNA.312-201ENST00000365089 102 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 Y_RNA.322-201ENST00000365151 102 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 RNU6-1323P-201ENST00000384025 107 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 RNU6-628P-201ENST00000410675 107 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 AC107083.1-201ENST00000439643 279 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 Y_RNA.650-201ENST00000459002 102 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 U8.19-201ENST00000459095 133 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 Y_RNA.777-201ENST00000516982 102 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 RNA5SP402-201ENST00000517148 110 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 AC007224.1-201ENST00000564410 144 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 Y_RNA.771-201ENST00000598668 102 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 AC073413.2-201ENST00000604332 360 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 Y_RNA.789-201ENST00000622480 102 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 AC012640.5-201ENST00000623897 319 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 AL035425.3-201ENST00000564206 4996 ntBASIC3.79□□□□□ -1.8
GTF3C3Q9Y5Q9 AC007336.1-201ENST00000576365 3828 ntBASIC3.78□□□□□ -1.8
GTF3C3Q9Y5Q9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GTF3C3Q9Y5Q9 SNORA72.4-201ENST00000384174 132 ntBASIC3.78□□□□□ -1.8
GTF3C3Q9Y5Q9 RNA5SP511-201ENST00000410487 115 ntBASIC3.78□□□□□ -1.8
GTF3C3Q9Y5Q9 RNA5SP450-201ENST00000411206 102 ntBASIC3.78□□□□□ -1.8
GTF3C3Q9Y5Q9 AL163195.1-201ENST00000496941 348 ntBASIC3.78□□□□□ -1.8
GTF3C3Q9Y5Q9 RNU6-63P-201ENST00000516690 95 ntBASIC3.78□□□□□ -1.8
GTF3C3Q9Y5Q9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.78□□□□□ -1.8
GTF3C3Q9Y5Q9 MIR3671-201ENST00000580455 88 ntBASIC3.78□□□□□ -1.8
GTF3C3Q9Y5Q9 MIR3200-201ENST00000580767 85 ntBASIC3.78□□□□□ -1.8
GTF3C3Q9Y5Q9 AC022513.1-201ENST00000624512 117 ntBASIC3.78□□□□□ -1.8
GTF3C3Q9Y5Q9 AC068647.2-201ENST00000637380 353 ntBASIC3.78□□□□□ -1.8
GTF3C3Q9Y5Q9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
GTF3C3Q9Y5Q9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.78□□□□□ -1.8
GTF3C3Q9Y5Q9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
GTF3C3Q9Y5Q9 RNU6-1272P-201ENST00000362776 107 ntBASIC3.77□□□□□ -1.81
GTF3C3Q9Y5Q9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GTF3C3Q9Y5Q9 SNORD15B-201ENST00000384714 146 ntBASIC3.77□□□□□ -1.81
GTF3C3Q9Y5Q9 RNA5SP501-201ENST00000410990 112 ntBASIC3.77□□□□□ -1.81
GTF3C3Q9Y5Q9 RNU6-847P-201ENST00000411115 108 ntBASIC3.77□□□□□ -1.81
GTF3C3Q9Y5Q9 AC004975.1-201ENST00000428733 208 ntBASIC3.77□□□□□ -1.81
GTF3C3Q9Y5Q9 RPS26P45-201ENST00000471748 340 ntBASIC3.77□□□□□ -1.81
GTF3C3Q9Y5Q9 HMGB3P3-201ENST00000510526 400 ntBASIC3.77□□□□□ -1.81
GTF3C3Q9Y5Q9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.77□□□□□ -1.81
GTF3C3Q9Y5Q9 AC004832.4-201ENST00000608952 331 ntBASIC3.77□□□□□ -1.81
GTF3C3Q9Y5Q9 AC018630.2-201ENST00000534866 2403 ntBASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 AC008555.8-201ENST00000623602 2168 ntBASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 SNORD116-13-201ENST00000384408 92 ntBASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 Y_RNA.552-201ENST00000384665 112 ntBASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 AL135786.1-201ENST00000415892 214 ntBASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 AC055731.1-201ENST00000474387 401 ntBASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 MTND1P19-201ENST00000511780 315 ntBASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 RNU4-71P-201ENST00000516258 113 ntBASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 AC084364.2-201ENST00000546924 395 ntBASIC3.76□□□□□ -1.81
GTF3C3Q9Y5Q9 AC015720.1-201ENST00000565251 277 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms