Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC104383.1-201ENST00000530297 370 ntBASIC-0.04□□□□□ -2.42
VPS29Q9UBQ0 AC022523.2-201ENST00000561045 150 ntBASIC-0.04□□□□□ -2.42
VPS29Q9UBQ0 MIR4667-201ENST00000578933 66 ntBASIC-0.04□□□□□ -2.42
VPS29Q9UBQ0 RAC1P9-201ENST00000604990 392 ntBASIC-0.04□□□□□ -2.42
VPS29Q9UBQ0 AL162730.1-201ENST00000605734 292 ntBASIC-0.04□□□□□ -2.42
VPS29Q9UBQ0 RNU6-833P-201ENST00000363486 107 ntBASIC-0.05□□□□□ -2.42
VPS29Q9UBQ0 RNA5SP48-201ENST00000363969 126 ntBASIC-0.05□□□□□ -2.42
VPS29Q9UBQ0 SNORD113.3-201ENST00000364630 78 ntBASIC-0.05□□□□□ -2.42
VPS29Q9UBQ0 RNU6-195P-201ENST00000411352 109 ntBASIC-0.05□□□□□ -2.42
VPS29Q9UBQ0 MTCO3P19-201ENST00000415864 321 ntBASIC-0.05□□□□□ -2.42
VPS29Q9UBQ0 snoU13.18-201ENST00000459483 104 ntBASIC-0.05□□□□□ -2.42
VPS29Q9UBQ0 RNU7-41P-201ENST00000515917 61 ntBASIC-0.05□□□□□ -2.42
VPS29Q9UBQ0 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.05□□□□□ -2.42
VPS29Q9UBQ0 MTND1P35-201ENST00000526739 508 ntBASIC-0.05□□□□□ -2.42
VPS29Q9UBQ0 AL137161.1-201ENST00000532231 390 ntBASIC-0.05□□□□□ -2.42
VPS29Q9UBQ0 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.05□□□□□ -2.42
VPS29Q9UBQ0 AK6P2-201ENST00000549020 471 ntBASIC-0.05□□□□□ -2.42
VPS29Q9UBQ0 RPL21P9-201ENST00000556149 474 ntBASIC-0.05□□□□□ -2.42
VPS29Q9UBQ0 AC010620.1-201ENST00000601088 1102 ntBASIC-0.05□□□□□ -2.42
VPS29Q9UBQ0 AP000240.1-201ENST00000609910 452 ntBASIC-0.05□□□□□ -2.42
VPS29Q9UBQ0 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.05□□□□□ -2.42
VPS29Q9UBQ0 OR5AK4P-201ENST00000635912 903 ntBASIC-0.05□□□□□ -2.42
VPS29Q9UBQ0 MIR18A-201ENST00000362310 71 ntBASIC-0.06□□□□□ -2.42
VPS29Q9UBQ0 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
VPS29Q9UBQ0 ZNF885P-201ENST00000420174 1098 ntBASIC-0.06□□□□□ -2.42
VPS29Q9UBQ0 HSFY5P-201ENST00000453726 309 ntBASIC-0.06□□□□□ -2.42
VPS29Q9UBQ0 SNORD65B-201ENST00000459126 73 ntBASIC-0.06□□□□□ -2.42
VPS29Q9UBQ0 RNA5SP54-201ENST00000516951 92 ntBASIC-0.06□□□□□ -2.42
VPS29Q9UBQ0 RNU7-172P-201ENST00000517125 64 ntBASIC-0.06□□□□□ -2.42
VPS29Q9UBQ0 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.06□□□□□ -2.42
VPS29Q9UBQ0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.06□□□□□ -2.42
VPS29Q9UBQ0 AC073544.1-201ENST00000600110 1595 ntBASIC-0.06□□□□□ -2.42
VPS29Q9UBQ0 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.07□□□□□ -2.42
VPS29Q9UBQ0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
VPS29Q9UBQ0 MIR520C-201ENST00000385005 87 ntBASIC-0.07□□□□□ -2.42
VPS29Q9UBQ0 MIR452-201ENST00000385020 85 ntBASIC-0.07□□□□□ -2.42
VPS29Q9UBQ0 RNU2-29P-201ENST00000410423 189 ntBASIC-0.07□□□□□ -2.42
VPS29Q9UBQ0 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.07□□□□□ -2.42
VPS29Q9UBQ0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.07□□□□□ -2.42
VPS29Q9UBQ0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.07□□□□□ -2.42
VPS29Q9UBQ0 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.07□□□□□ -2.42
VPS29Q9UBQ0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.07□□□□□ -2.42
VPS29Q9UBQ0 RNU11-2P-201ENST00000516898 142 ntBASIC-0.07□□□□□ -2.42
VPS29Q9UBQ0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.07□□□□□ -2.42
VPS29Q9UBQ0 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.07□□□□□ -2.42
VPS29Q9UBQ0 MIR4315-1-201ENST00000636800 73 ntBASIC-0.07□□□□□ -2.42
VPS29Q9UBQ0 MIR4315-2-201ENST00000640925 73 ntBASIC-0.07□□□□□ -2.42
VPS29Q9UBQ0 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
VPS29Q9UBQ0 SNORD113-6-201ENST00000363345 75 ntBASIC-0.08□□□□□ -2.42
VPS29Q9UBQ0 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.08□□□□□ -2.42
VPS29Q9UBQ0 MIR32-201ENST00000384965 70 ntBASIC-0.08□□□□□ -2.42
VPS29Q9UBQ0 SNORD71-201ENST00000411292 86 ntBASIC-0.08□□□□□ -2.42
VPS29Q9UBQ0 SSR1P2-201ENST00000415208 787 ntBASIC-0.08□□□□□ -2.42
VPS29Q9UBQ0 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.08□□□□□ -2.42
VPS29Q9UBQ0 SNORA62.5-201ENST00000516634 120 ntBASIC-0.08□□□□□ -2.42
VPS29Q9UBQ0 RNU4-77P-201ENST00000516692 156 ntBASIC-0.08□□□□□ -2.42
VPS29Q9UBQ0 AP003327.1-201ENST00000529684 127 ntBASIC-0.08□□□□□ -2.42
VPS29Q9UBQ0 AC023442.1-201ENST00000531247 422 ntBASIC-0.08□□□□□ -2.42
VPS29Q9UBQ0 RN7SL793P-201ENST00000583259 296 ntBASIC-0.08□□□□□ -2.42
VPS29Q9UBQ0 AC091178.2-201ENST00000584401 117 ntBASIC-0.08□□□□□ -2.42
VPS29Q9UBQ0 AC104695.3-201ENST00000604052 296 ntBASIC-0.08□□□□□ -2.42
VPS29Q9UBQ0 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.08□□□□□ -2.42
VPS29Q9UBQ0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.08□□□□□ -2.42
VPS29Q9UBQ0 RNU6-222P-201ENST00000362438 107 ntBASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 RNU6-654P-201ENST00000364373 107 ntBASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 RNU6-606P-201ENST00000384721 111 ntBASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 MIR518A1-201ENST00000385068 85 ntBASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 AC073261.1-201ENST00000429409 121 ntBASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 MTND1P22-201ENST00000510572 951 ntBASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 SNORA25.12-201ENST00000516202 82 ntBASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 SNORA74.3-201ENST00000517108 154 ntBASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 AC093027.1-201ENST00000546698 429 ntBASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 MIR5583-1-201ENST00000580941 59 ntBASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 AC120024.3-201ENST00000603167 156 ntBASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 AC064836.2-201ENST00000609491 462 ntBASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 TUSC7.1-201ENST00000610969 165 ntBASIC-0.09□□□□□ -2.42
VPS29Q9UBQ0 MIR411-201ENST00000362239 96 ntBASIC-0.1□□□□□ -2.43
VPS29Q9UBQ0 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.1□□□□□ -2.43
VPS29Q9UBQ0 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.1□□□□□ -2.43
VPS29Q9UBQ0 SNORD14.1-201ENST00000365609 90 ntBASIC-0.1□□□□□ -2.43
VPS29Q9UBQ0 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.1□□□□□ -2.43
VPS29Q9UBQ0 SNORA2B-201ENST00000384583 137 ntBASIC-0.1□□□□□ -2.43
VPS29Q9UBQ0 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.1□□□□□ -2.43
VPS29Q9UBQ0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.1□□□□□ -2.43
VPS29Q9UBQ0 AC009961.2-201ENST00000435771 251 ntBASIC-0.1□□□□□ -2.43
VPS29Q9UBQ0 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.1□□□□□ -2.43
VPS29Q9UBQ0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.1□□□□□ -2.43
VPS29Q9UBQ0 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.1□□□□□ -2.43
VPS29Q9UBQ0 AC093534.1-201ENST00000504977 132 ntBASIC-0.1□□□□□ -2.43
VPS29Q9UBQ0 AC010598.1-201ENST00000510378 103 ntBASIC-0.1□□□□□ -2.43
VPS29Q9UBQ0 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.1□□□□□ -2.43
VPS29Q9UBQ0 SCOCP1-201ENST00000554676 349 ntBASIC-0.1□□□□□ -2.43
VPS29Q9UBQ0 EIF1P4-201ENST00000572664 335 ntBASIC-0.1□□□□□ -2.43
VPS29Q9UBQ0 AC027279.3-201ENST00000625055 122 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms