Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 SNORA75-201ENST00000384158 137 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 MIR487A-201ENST00000385009 80 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 MIR450B-201ENST00000401182 78 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 RNA5SP511-201ENST00000410487 115 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AC005534.2-201ENST00000431047 433 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.52□□□□□ -2.33
CCDC88CQ9P219 RNU7-180P-201ENST00000459240 63 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AC093534.1-201ENST00000504977 132 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AC010424.1-201ENST00000506336 297 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 RNU1-142P-201ENST00000516682 145 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 SNORA70.22-201ENST00000517160 124 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AC090142.3-201ENST00000519012 385 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.52□□□□□ -2.33
CCDC88CQ9P219 TPRKBP2-201ENST00000565969 475 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.52□□□□□ -2.33
CCDC88CQ9P219 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 uc_338.34-201ENST00000617467 174 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AC126177.8-201ENST00000618339 1015 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AC024614.3-201ENST00000637860 256 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 RNA5SP327-201ENST00000362494 101 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 RNY1P16-201ENST00000363063 111 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 SNORA4.2-201ENST00000365313 147 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 RNA5SP259-201ENST00000365541 109 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 MIR508-201ENST00000384857 115 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 MIR586-201ENST00000385035 97 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 RNA5SP193-201ENST00000410353 107 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.51□□□□□ -2.33
CCDC88CQ9P219 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.51□□□□□ -2.33
CCDC88CQ9P219 RPL39P39-201ENST00000455840 151 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 MTND1P11-201ENST00000456661 876 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 SNORD5.1-201ENST00000458800 75 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 SNORD65B-201ENST00000459126 73 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 PSMC1P5-201ENST00000512850 177 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 RNU6-1041P-201ENST00000516254 102 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 RNU6-948P-201ENST00000516374 107 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 RNU6-566P-201ENST00000516790 107 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.51□□□□□ -2.33
CCDC88CQ9P219 OSBPL9P5-201ENST00000542581 171 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 SCOCP1-201ENST00000554676 349 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 AC092747.3-201ENST00000603769 301 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 AL359075.3-201ENST00000613288 217 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.51□□□□□ -2.33
CCDC88CQ9P219 FER-210ENST00000628534 558 ntTSL 5 BASIC0.51□□□□□ -2.33
CCDC88CQ9P219 U6.108-201ENST00000637764 58 ntBASIC0.51□□□□□ -2.33
CCDC88CQ9P219 RNU6-1329P-201ENST00000365664 107 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 Y_RNA.533-201ENST00000384596 114 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 MIR562-201ENST00000384894 95 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 SNORD37.1-201ENST00000390968 65 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 RNU6-1093P-201ENST00000391194 107 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.5□□□□□ -2.33
CCDC88CQ9P219 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC88CQ9P219 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC88CQ9P219 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC88CQ9P219 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC88CQ9P219 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC88CQ9P219 Y_RNA.688-201ENST00000516565 95 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 RNA5SP454-201ENST00000517231 127 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.5□□□□□ -2.33
CCDC88CQ9P219 MIR3664-201ENST00000579074 99 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 AC022217.4-201ENST00000604389 163 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 AC073114.1-201ENST00000612027 490 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 AC006001.4-201ENST00000622243 395 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 RNU6-214P-201ENST00000384130 107 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
CCDC88CQ9P219 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.5□□□□□ -2.33
CCDC88CQ9P219 Z98949.2-201ENST00000440996 144 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 MTND4P18-201ENST00000447010 465 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 NFU1P2-201ENST00000448700 469 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC88CQ9P219 MTCO2P18-201ENST00000457151 658 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 RNU6-221P-201ENST00000459541 99 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 AC097462.1-201ENST00000514125 324 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 AC026407.1-201ENST00000518369 204 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 AC026470.2-201ENST00000561492 181 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 AC004584.2-201ENST00000570407 410 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 AL929325.1-201ENST00000603096 117 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 AL357078.3-201ENST00000607528 618 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 DISC2.1-201ENST00000612827 205 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 FAM157A-202ENST00000615155 405 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 MIR338-201ENST00000636369 67 ntBASIC0.5□□□□□ -2.33
CCDC88CQ9P219 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
CCDC88CQ9P219 RNA5SP347-201ENST00000362445 119 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 RNU6-522P-201ENST00000364497 107 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 Y_RNA.517-201ENST00000384551 106 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 RNU6-1156P-201ENST00000410365 100 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 RNU6-57P-201ENST00000411348 103 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 MTND3P23-201ENST00000431980 347 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 AC007215.1-201ENST00000464893 276 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 AC048334.1-201ENST00000477975 159 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 RPS26P48-201ENST00000491713 339 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.49□□□□□ -2.33
CCDC88CQ9P219 SNORA25.14-201ENST00000516481 132 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 AC022868.1-201ENST00000517767 391 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.49□□□□□ -2.33
CCDC88CQ9P219 AC109810.1-201ENST00000534066 224 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms