Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBP1Q9NZI7 SNORD67-201ENST00000390833 111 ntBASIC3.17□□□□□ -1.9
UBP1Q9NZI7 RNA5SP293-201ENST00000410527 113 ntBASIC3.17□□□□□ -1.9
UBP1Q9NZI7 RN7SKP220-201ENST00000410611 288 ntBASIC3.17□□□□□ -1.9
UBP1Q9NZI7 AC006028.1-201ENST00000438379 402 ntBASIC3.17□□□□□ -1.9
UBP1Q9NZI7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.17□□□□□ -1.9
UBP1Q9NZI7 AC027419.1-201ENST00000522976 328 ntBASIC3.17□□□□□ -1.9
UBP1Q9NZI7 MIR4724-201ENST00000579485 89 ntBASIC3.17□□□□□ -1.9
UBP1Q9NZI7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBP1Q9NZI7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UBP1Q9NZI7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBP1Q9NZI7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBP1Q9NZI7 AL356292.1-201ENST00000283110 373 ntBASIC3.16□□□□□ -1.9
UBP1Q9NZI7 SNORD116-13-201ENST00000384408 92 ntBASIC3.16□□□□□ -1.9
UBP1Q9NZI7 MIR592-201ENST00000384959 97 ntBASIC3.16□□□□□ -1.9
UBP1Q9NZI7 AL353705.1-201ENST00000433468 480 ntBASIC3.16□□□□□ -1.9
UBP1Q9NZI7 BX510359.1-201ENST00000456973 237 ntBASIC3.16□□□□□ -1.9
UBP1Q9NZI7 RPS27P22-201ENST00000478056 241 ntBASIC3.16□□□□□ -1.9
UBP1Q9NZI7 AC010409.1-201ENST00000487382 476 ntBASIC3.16□□□□□ -1.9
UBP1Q9NZI7 AC117454.1-201ENST00000491120 168 ntBASIC3.16□□□□□ -1.9
UBP1Q9NZI7 RN7SL504P-201ENST00000494496 287 ntBASIC3.16□□□□□ -1.9
UBP1Q9NZI7 RNU6-1146P-201ENST00000516282 102 ntBASIC3.16□□□□□ -1.9
UBP1Q9NZI7 RNU6-789P-201ENST00000517105 102 ntBASIC3.16□□□□□ -1.9
UBP1Q9NZI7 MIR3144-201ENST00000579460 79 ntBASIC3.16□□□□□ -1.9
UBP1Q9NZI7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.16□□□□□ -1.9
UBP1Q9NZI7 AL161756.2-201ENST00000604597 246 ntBASIC3.16□□□□□ -1.9
UBP1Q9NZI7 AC093010.3-201ENST00000570269 15214 ntBASIC3.16□□□□□ -1.9
UBP1Q9NZI7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBP1Q9NZI7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.15□□□□□ -1.9
UBP1Q9NZI7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
UBP1Q9NZI7 AC068700.1-201ENST00000565862 3754 ntBASIC3.15□□□□□ -1.9
UBP1Q9NZI7 MIR148B-201ENST00000362252 99 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 MIR367-201ENST00000362299 68 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 RNU6-275P-201ENST00000364910 107 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 RNU6-117P-201ENST00000365415 107 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 RNY1P5-201ENST00000383890 115 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 Y_RNA.412-201ENST00000384001 104 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 MIR34B-201ENST00000385076 84 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 MIR1253-201ENST00000408273 105 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 SNORA36B-201ENST00000410438 131 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 RNU6-1135P-201ENST00000411083 103 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 AL135786.1-201ENST00000415892 214 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.15□□□□□ -1.91
UBP1Q9NZI7 Z96811.1-201ENST00000445880 108 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.15□□□□□ -1.91
UBP1Q9NZI7 Y_RNA.797-201ENST00000515977 94 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 NDUFA5P6-201ENST00000542110 379 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 AC127455.1-201ENST00000565496 145 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 MIR4744-201ENST00000581563 82 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 MIR3133-201ENST00000583157 78 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 POLR3GP1-201ENST00000594073 261 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 AL391903.3-201ENST00000612158 163 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 AC021753.1-201ENST00000635724 168 ntBASIC3.15□□□□□ -1.91
UBP1Q9NZI7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBP1Q9NZI7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBP1Q9NZI7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBP1Q9NZI7 Y_RNA.24-201ENST00000362508 103 ntBASIC3.14□□□□□ -1.91
UBP1Q9NZI7 Y_RNA.99-201ENST00000363138 105 ntBASIC3.14□□□□□ -1.91
UBP1Q9NZI7 Y_RNA.170-201ENST00000363746 110 ntBASIC3.14□□□□□ -1.91
UBP1Q9NZI7 Y_RNA.506-201ENST00000384494 102 ntBASIC3.14□□□□□ -1.91
UBP1Q9NZI7 SNORD15B-201ENST00000384714 146 ntBASIC3.14□□□□□ -1.91
UBP1Q9NZI7 MIR616-201ENST00000385293 97 ntBASIC3.14□□□□□ -1.91
UBP1Q9NZI7 EBAG9P1-201ENST00000418955 543 ntBASIC3.14□□□□□ -1.91
UBP1Q9NZI7 AC092427.1-202ENST00000430569 476 ntBASIC3.14□□□□□ -1.91
UBP1Q9NZI7 RPL23AP83-201ENST00000434984 473 ntBASIC3.14□□□□□ -1.91
UBP1Q9NZI7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.14□□□□□ -1.91
UBP1Q9NZI7 AC009238.1-201ENST00000442165 424 ntBASIC3.14□□□□□ -1.91
UBP1Q9NZI7 AC009237.6-201ENST00000446969 424 ntBASIC3.14□□□□□ -1.91
UBP1Q9NZI7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.14□□□□□ -1.91
UBP1Q9NZI7 MIR4438-201ENST00000585271 93 ntBASIC3.14□□□□□ -1.91
UBP1Q9NZI7 U2.20-201ENST00000613956 192 ntBASIC3.14□□□□□ -1.91
UBP1Q9NZI7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
UBP1Q9NZI7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.13□□□□□ -1.91
UBP1Q9NZI7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
UBP1Q9NZI7 RNU6-774P-201ENST00000363238 107 ntBASIC3.13□□□□□ -1.91
UBP1Q9NZI7 RNU4-13P-201ENST00000364019 141 ntBASIC3.13□□□□□ -1.91
UBP1Q9NZI7 snoU2_19.4-201ENST00000364329 80 ntBASIC3.13□□□□□ -1.91
UBP1Q9NZI7 RNU4-10P-201ENST00000364383 140 ntBASIC3.13□□□□□ -1.91
UBP1Q9NZI7 Y_RNA.357-201ENST00000365487 109 ntBASIC3.13□□□□□ -1.91
UBP1Q9NZI7 RNU6-969P-201ENST00000383900 105 ntBASIC3.13□□□□□ -1.91
UBP1Q9NZI7 RNU6-125P-201ENST00000384505 107 ntBASIC3.13□□□□□ -1.91
UBP1Q9NZI7 MIR181A2-201ENST00000384863 110 ntBASIC3.13□□□□□ -1.91
UBP1Q9NZI7 RNU4-47P-201ENST00000410876 114 ntBASIC3.13□□□□□ -1.91
UBP1Q9NZI7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.13□□□□□ -1.91
UBP1Q9NZI7 AL162725.1-201ENST00000435405 301 ntBASIC3.13□□□□□ -1.91
UBP1Q9NZI7 AC097462.1-201ENST00000514125 324 ntBASIC3.13□□□□□ -1.91
UBP1Q9NZI7 AC068657.1-201ENST00000520807 306 ntBASIC3.13□□□□□ -1.91
UBP1Q9NZI7 AC090616.3-201ENST00000582184 217 ntBASIC3.13□□□□□ -1.91
UBP1Q9NZI7 AC007179.3-201ENST00000604976 235 ntBASIC3.13□□□□□ -1.91
UBP1Q9NZI7 AC093732.2-201ENST00000607950 274 ntBASIC3.13□□□□□ -1.91
UBP1Q9NZI7 AC091953.5-201ENST00000622919 233 ntBASIC3.13□□□□□ -1.91
UBP1Q9NZI7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBP1Q9NZI7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBP1Q9NZI7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBP1Q9NZI7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UBP1Q9NZI7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.12□□□□□ -1.91
UBP1Q9NZI7 MIR340-201ENST00000362125 95 ntBASIC3.12□□□□□ -1.91
UBP1Q9NZI7 RNU1-22P-201ENST00000363334 158 ntBASIC3.12□□□□□ -1.91
UBP1Q9NZI7 SNORA7.4-201ENST00000384249 137 ntBASIC3.12□□□□□ -1.91
UBP1Q9NZI7 RNU6-578P-201ENST00000390980 103 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms