Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 AC018462.2-201ENST00000605375 395 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 AL050343.2-201ENST00000607338 280 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.19□□□□□ -2.22
SMPD3Q9NY59 AL133216.2-202ENST00000634512 349 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 RNU6-1266P-201ENST00000362794 105 ntBASIC1.18□□□□□ -2.22
SMPD3Q9NY59 RNU6-593P-201ENST00000364716 112 ntBASIC1.18□□□□□ -2.22
SMPD3Q9NY59 RNU6-60P-201ENST00000364792 103 ntBASIC1.18□□□□□ -2.22
SMPD3Q9NY59 SNORA4.2-201ENST00000365313 147 ntBASIC1.18□□□□□ -2.22
SMPD3Q9NY59 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SMPD3Q9NY59 RPS3AP52-201ENST00000435639 297 ntBASIC1.18□□□□□ -2.22
SMPD3Q9NY59 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.18□□□□□ -2.22
SMPD3Q9NY59 AC026782.1-201ENST00000512952 449 ntBASIC1.18□□□□□ -2.22
SMPD3Q9NY59 RNU7-40P-201ENST00000516397 64 ntBASIC1.18□□□□□ -2.22
SMPD3Q9NY59 RNU6-358P-201ENST00000516564 75 ntBASIC1.18□□□□□ -2.22
SMPD3Q9NY59 RNU1-142P-201ENST00000516682 145 ntBASIC1.18□□□□□ -2.22
SMPD3Q9NY59 RN7SKP88-201ENST00000516847 250 ntBASIC1.18□□□□□ -2.22
SMPD3Q9NY59 AK6P2-201ENST00000549020 471 ntBASIC1.18□□□□□ -2.22
SMPD3Q9NY59 AL442163.3-201ENST00000554110 156 ntBASIC1.18□□□□□ -2.22
SMPD3Q9NY59 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.18□□□□□ -2.22
SMPD3Q9NY59 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.18□□□□□ -2.22
SMPD3Q9NY59 AC010999.1-201ENST00000611856 324 ntBASIC1.18□□□□□ -2.22
SMPD3Q9NY59 7SK.8-201ENST00000612110 250 ntBASIC1.18□□□□□ -2.22
SMPD3Q9NY59 AL359075.3-201ENST00000613288 217 ntBASIC1.18□□□□□ -2.22
SMPD3Q9NY59 7SK.11-201ENST00000615477 250 ntBASIC1.18□□□□□ -2.22
SMPD3Q9NY59 7SK.13-201ENST00000622040 250 ntBASIC1.18□□□□□ -2.22
SMPD3Q9NY59 Y_RNA.2-201ENST00000362330 96 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 RNU6-222P-201ENST00000362438 107 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 RNA5SP327-201ENST00000362494 101 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 Y_RNA.72-201ENST00000362894 103 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 RNA5SP259-201ENST00000365541 109 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.17□□□□□ -2.22
SMPD3Q9NY59 Y_RNA.473-201ENST00000384333 102 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
SMPD3Q9NY59 RNU1-139P-201ENST00000391307 165 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 MIR548K-201ENST00000408406 116 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 Y_RNA.594-201ENST00000410373 140 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.17□□□□□ -2.22
SMPD3Q9NY59 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.17□□□□□ -2.22
SMPD3Q9NY59 AC107399.1-201ENST00000451226 265 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 AC018710.1-201ENST00000506509 158 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 Y_RNA.683-201ENST00000516508 93 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 AP003033.1-201ENST00000527244 415 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 AL121579.1-201ENST00000555129 305 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.17□□□□□ -2.22
SMPD3Q9NY59 AC011712.1-201ENST00000588959 234 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 AC022432.1-201ENST00000595739 310 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 MZT1P2-201ENST00000604387 248 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 AC084782.3-201ENST00000612282 578 ntBASIC1.17□□□□□ -2.22
SMPD3Q9NY59 Y_RNA.106-201ENST00000363189 100 ntBASIC1.16□□□□□ -2.22
SMPD3Q9NY59 Y_RNA.184-201ENST00000363884 108 ntBASIC1.16□□□□□ -2.22
SMPD3Q9NY59 RNA5SP109-201ENST00000391010 116 ntBASIC1.16□□□□□ -2.22
SMPD3Q9NY59 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
SMPD3Q9NY59 RNU6-1050P-201ENST00000410388 107 ntBASIC1.16□□□□□ -2.22
SMPD3Q9NY59 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.16□□□□□ -2.22
SMPD3Q9NY59 RNU1-123P-201ENST00000458950 160 ntBASIC1.16□□□□□ -2.22
SMPD3Q9NY59 RNU6-107P-201ENST00000516643 102 ntBASIC1.16□□□□□ -2.22
SMPD3Q9NY59 Y_RNA.708-201ENST00000516950 96 ntBASIC1.16□□□□□ -2.22
SMPD3Q9NY59 APOOP3-201ENST00000536787 586 ntBASIC1.16□□□□□ -2.22
SMPD3Q9NY59 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.16□□□□□ -2.22
SMPD3Q9NY59 AC093023.1-201ENST00000547375 507 ntBASIC1.16□□□□□ -2.22
SMPD3Q9NY59 AL137100.2-201ENST00000555786 315 ntBASIC1.16□□□□□ -2.22
SMPD3Q9NY59 AC015712.3-201ENST00000559380 164 ntBASIC1.16□□□□□ -2.22
SMPD3Q9NY59 MIR3664-201ENST00000579074 99 ntBASIC1.16□□□□□ -2.22
SMPD3Q9NY59 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.16□□□□□ -2.22
SMPD3Q9NY59 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SMPD3Q9NY59 MTND5P16-201ENST00000460269 1703 ntBASIC1.15□□□□□ -2.22
SMPD3Q9NY59 RNA5SP432-201ENST00000362480 116 ntBASIC1.15□□□□□ -2.23
SMPD3Q9NY59 RNU6-281P-201ENST00000384212 103 ntBASIC1.15□□□□□ -2.23
SMPD3Q9NY59 RNU6-601P-201ENST00000384540 107 ntBASIC1.15□□□□□ -2.23
SMPD3Q9NY59 RNU6-700P-201ENST00000391043 107 ntBASIC1.15□□□□□ -2.23
SMPD3Q9NY59 RNU6-482P-201ENST00000391068 107 ntBASIC1.15□□□□□ -2.23
SMPD3Q9NY59 RNU6-1186P-201ENST00000410429 97 ntBASIC1.15□□□□□ -2.23
SMPD3Q9NY59 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.15□□□□□ -2.23
SMPD3Q9NY59 MTND4P18-201ENST00000447010 465 ntBASIC1.15□□□□□ -2.23
SMPD3Q9NY59 FGF7P6-202ENST00000451282 293 ntBASIC1.15□□□□□ -2.23
SMPD3Q9NY59 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.15□□□□□ -2.23
SMPD3Q9NY59 AC090617.3-201ENST00000573670 475 ntBASIC1.15□□□□□ -2.23
SMPD3Q9NY59 MIR5701-3-201ENST00000578890 82 ntBASIC1.15□□□□□ -2.23
SMPD3Q9NY59 MIR5701-1-201ENST00000585138 82 ntBASIC1.15□□□□□ -2.23
SMPD3Q9NY59 AC080078.2-201ENST00000603766 501 ntBASIC1.15□□□□□ -2.23
SMPD3Q9NY59 AC005014.2-201ENST00000607795 599 ntBASIC1.15□□□□□ -2.23
SMPD3Q9NY59 MIR5701-2-201ENST00000615634 82 ntBASIC1.15□□□□□ -2.23
SMPD3Q9NY59 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.15□□□□□ -2.23
SMPD3Q9NY59 AL353997.5-201ENST00000618886 171 ntBASIC1.15□□□□□ -2.23
SMPD3Q9NY59 AC098679.4-201ENST00000624241 654 ntBASIC1.15□□□□□ -2.23
SMPD3Q9NY59 RNY1P16-201ENST00000363063 111 ntBASIC1.14□□□□□ -2.23
SMPD3Q9NY59 RPL21P1-201ENST00000399532 476 ntBASIC1.14□□□□□ -2.23
SMPD3Q9NY59 MIR190B-201ENST00000401119 79 ntBASIC1.14□□□□□ -2.23
SMPD3Q9NY59 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.14□□□□□ -2.23
SMPD3Q9NY59 TOMM22P2-201ENST00000430735 237 ntBASIC1.14□□□□□ -2.23
SMPD3Q9NY59 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.14□□□□□ -2.23
SMPD3Q9NY59 AL353997.1-201ENST00000432936 108 ntBASIC1.14□□□□□ -2.23
SMPD3Q9NY59 AC005002.2-201ENST00000438228 269 ntBASIC1.14□□□□□ -2.23
SMPD3Q9NY59 RNU7-87P-201ENST00000459343 62 ntBASIC1.14□□□□□ -2.23
SMPD3Q9NY59 Y_RNA.670-201ENST00000516255 105 ntBASIC1.14□□□□□ -2.23
SMPD3Q9NY59 AC091144.1-201ENST00000519573 138 ntBASIC1.14□□□□□ -2.23
SMPD3Q9NY59 FRG2DP-202ENST00000566967 323 ntBASIC1.14□□□□□ -2.23
SMPD3Q9NY59 AC009229.3-201ENST00000608056 282 ntBASIC1.14□□□□□ -2.23
SMPD3Q9NY59 U6atac.1-201ENST00000616025 117 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms