Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.08□□□□□ -2.08
PCDH9Q9HC56 HMGN2P9-201ENST00000476875 229 ntBASIC2.08□□□□□ -2.08
PCDH9Q9HC56 AC074133.1-201ENST00000515696 183 ntBASIC2.08□□□□□ -2.08
PCDH9Q9HC56 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.08□□□□□ -2.08
PCDH9Q9HC56 AC233702.2-202ENST00000562547 291 ntBASIC2.08□□□□□ -2.08
PCDH9Q9HC56 MIR4648-201ENST00000580107 72 ntBASIC2.08□□□□□ -2.08
PCDH9Q9HC56 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.08□□□□□ -2.08
PCDH9Q9HC56 AC013412.1-201ENST00000610687 192 ntBASIC2.08□□□□□ -2.08
PCDH9Q9HC56 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.08□□□□□ -2.08
PCDH9Q9HC56 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.08□□□□□ -2.08
PCDH9Q9HC56 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.08□□□□□ -2.08
PCDH9Q9HC56 Y_RNA.19-201ENST00000362462 99 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 Y_RNA.26-201ENST00000362539 101 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 Y_RNA.64-201ENST00000362845 102 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 SNORA72.2-201ENST00000365028 127 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 RNU6-806P-201ENST00000365147 105 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 Y_RNA.512-201ENST00000384518 102 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 MIR586-201ENST00000385035 97 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 MRPL35P1-201ENST00000404272 572 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 RNA5SP475-201ENST00000410568 110 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 HMGN2P38-201ENST00000423806 265 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 RAB28P5-201ENST00000427490 651 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 DYNLT3P2-201ENST00000442517 295 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 AL137159.1-201ENST00000452808 512 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 RNU7-57P-201ENST00000459540 60 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 RPL26P26-201ENST00000480251 434 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.07□□□□□ -2.08
PCDH9Q9HC56 IGKV3-31-201ENST00000523109 329 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.07□□□□□ -2.08
PCDH9Q9HC56 MIR3126-201ENST00000577443 74 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 MIR3935-201ENST00000583472 104 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 AC007229.1-201ENST00000590455 412 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 AC004467.1-201ENST00000615678 330 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 AC010205.1-201ENST00000616668 449 ntBASIC2.07□□□□□ -2.08
PCDH9Q9HC56 RNU6-770P-201ENST00000363929 105 ntBASIC2.06□□□□□ -2.08
PCDH9Q9HC56 RNU6-1105P-201ENST00000384774 107 ntBASIC2.06□□□□□ -2.08
PCDH9Q9HC56 AC139712.2-201ENST00000424302 339 ntBASIC2.06□□□□□ -2.08
PCDH9Q9HC56 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.06□□□□□ -2.08
PCDH9Q9HC56 AC016925.1-201ENST00000458303 298 ntBASIC2.06□□□□□ -2.08
PCDH9Q9HC56 Y_RNA.713-201ENST00000517013 96 ntBASIC2.06□□□□□ -2.08
PCDH9Q9HC56 NDUFA5P6-201ENST00000542110 379 ntBASIC2.06□□□□□ -2.08
PCDH9Q9HC56 AL117187.1-201ENST00000555482 181 ntBASIC2.06□□□□□ -2.08
PCDH9Q9HC56 AC055872.1-201ENST00000570978 278 ntBASIC2.06□□□□□ -2.08
PCDH9Q9HC56 AC005176.2-201ENST00000596933 147 ntBASIC2.06□□□□□ -2.08
PCDH9Q9HC56 AL109918.3-201ENST00000603072 338 ntBASIC2.06□□□□□ -2.08
PCDH9Q9HC56 AL162730.1-201ENST00000605734 292 ntBASIC2.06□□□□□ -2.08
PCDH9Q9HC56 SDR42E1P4-201ENST00000620894 481 ntBASIC2.06□□□□□ -2.08
PCDH9Q9HC56 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
PCDH9Q9HC56 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
PCDH9Q9HC56 Y_RNA.105-201ENST00000363182 111 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 Y_RNA.183-201ENST00000363882 113 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 Y_RNA.222-201ENST00000364264 102 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 RNU6-1109P-201ENST00000391187 107 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 MIR1262-201ENST00000408276 93 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 RNU6-57P-201ENST00000411348 103 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 AC123900.1-201ENST00000420390 96 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 AL358176.2-201ENST00000425769 204 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 AL445646.1-201ENST00000431784 216 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 AC005002.2-201ENST00000438228 269 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 AC073910.1-201ENST00000445047 438 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 RNA5SP233-201ENST00000459153 113 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 AC114982.1-201ENST00000469402 321 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 AC055731.1-201ENST00000474387 401 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 AC098869.1-201ENST00000481627 292 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 RPS29P21-201ENST00000496272 170 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.05□□□□□ -2.08
PCDH9Q9HC56 RNU1-41P-201ENST00000516161 162 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 RNU1-48P-201ENST00000516400 162 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 AP002001.1-203ENST00000534002 267 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.05□□□□□ -2.08
PCDH9Q9HC56 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.05□□□□□ -2.08
PCDH9Q9HC56 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.05□□□□□ -2.08
PCDH9Q9HC56 AC136932.1-201ENST00000574771 208 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.05□□□□□ -2.08
PCDH9Q9HC56 AC078899.2-201ENST00000595282 212 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 AC008749.1-201ENST00000597650 306 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 Y_RNA.783-201ENST00000613546 102 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 AC130454.1-201ENST00000622948 401 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 MIR3674-201ENST00000636576 68 ntBASIC2.05□□□□□ -2.08
PCDH9Q9HC56 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.05□□□□□ -2.08
PCDH9Q9HC56 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
PCDH9Q9HC56 Y_RNA.47-201ENST00000362697 108 ntBASIC2.04□□□□□ -2.08
PCDH9Q9HC56 U3.8-201ENST00000363675 217 ntBASIC2.04□□□□□ -2.08
PCDH9Q9HC56 Y_RNA.176-201ENST00000363815 109 ntBASIC2.04□□□□□ -2.08
PCDH9Q9HC56 RNU4-52P-201ENST00000384209 138 ntBASIC2.04□□□□□ -2.08
PCDH9Q9HC56 RNU6-975P-201ENST00000384296 105 ntBASIC2.04□□□□□ -2.08
PCDH9Q9HC56 RNU1-148P-201ENST00000384472 162 ntBASIC2.04□□□□□ -2.08
PCDH9Q9HC56 RPL21P1-201ENST00000399532 476 ntBASIC2.04□□□□□ -2.08
PCDH9Q9HC56 RNU4-30P-201ENST00000410245 143 ntBASIC2.04□□□□□ -2.08
PCDH9Q9HC56 Y_RNA.602-201ENST00000410535 92 ntBASIC2.04□□□□□ -2.08
PCDH9Q9HC56 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.04□□□□□ -2.08
PCDH9Q9HC56 MTND3P2-201ENST00000438452 342 ntBASIC2.04□□□□□ -2.08
PCDH9Q9HC56 AC074290.1-201ENST00000448883 135 ntBASIC2.04□□□□□ -2.08
PCDH9Q9HC56 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.04□□□□□ -2.08
PCDH9Q9HC56 RNU7-110P-201ENST00000516891 62 ntBASIC2.04□□□□□ -2.08
PCDH9Q9HC56 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.04□□□□□ -2.08
PCDH9Q9HC56 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms