Protein–RNA interactions for Protein: Q9H7L9

SUDS3, Sin3 histone deacetylase corepressor complex component SDS3, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3Q9H7L9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 U3.8-201ENST00000363675 217 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 RNU6-1059P-201ENST00000363752 98 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 RNU6-280P-201ENST00000364145 104 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 RNU6-392P-201ENST00000364926 101 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 Y_RNA.405-201ENST00000383979 100 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 Y_RNA.415-201ENST00000384012 112 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 Y_RNA.451-201ENST00000384200 100 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 Y_RNA.524-201ENST00000384564 100 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 Y_RNA.561-201ENST00000384694 100 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 MRPL35P1-201ENST00000404272 572 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 USP9YP30-201ENST00000430729 455 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 MTND1P17-201ENST00000448961 204 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 COX6CP14-201ENST00000469580 174 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 AC091179.3-201ENST00000474761 144 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 AL163195.1-201ENST00000496941 348 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 HMGN1P12-201ENST00000499125 195 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 Y_RNA.655-201ENST00000515919 96 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 RNU4-49P-201ENST00000516080 140 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 AC019176.1-201ENST00000518519 225 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 AC134698.4-201ENST00000523451 826 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 AL590705.4-201ENST00000532209 134 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 AK6P2-201ENST00000549020 471 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 AC015688.6-201ENST00000577737 104 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 AC073413.2-201ENST00000604332 360 ntBASIC1.2□□□□□ -2.22
SUDS3Q9H7L9 ZNF299P-201ENST00000406845 1804 ntBASIC1.19□□□□□ -2.22
SUDS3Q9H7L9 RNU5F-3P-201ENST00000363767 117 ntBASIC1.19□□□□□ -2.22
SUDS3Q9H7L9 RNU6-595P-201ENST00000363944 107 ntBASIC1.19□□□□□ -2.22
SUDS3Q9H7L9 RNU6-793P-201ENST00000384233 104 ntBASIC1.19□□□□□ -2.22
SUDS3Q9H7L9 RNA5SP109-201ENST00000391010 116 ntBASIC1.19□□□□□ -2.22
SUDS3Q9H7L9 MIR1185-2-201ENST00000408687 86 ntBASIC1.19□□□□□ -2.22
SUDS3Q9H7L9 EIF1P1-201ENST00000421436 341 ntBASIC1.19□□□□□ -2.22
SUDS3Q9H7L9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.19□□□□□ -2.22
SUDS3Q9H7L9 NDUFB4P10-201ENST00000452541 359 ntBASIC1.19□□□□□ -2.22
SUDS3Q9H7L9 AP000870.1-201ENST00000472927 406 ntBASIC1.19□□□□□ -2.22
SUDS3Q9H7L9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.19□□□□□ -2.22
SUDS3Q9H7L9 AL133373.1-201ENST00000497098 94 ntBASIC1.19□□□□□ -2.22
SUDS3Q9H7L9 MIR4709-201ENST00000577272 72 ntBASIC1.19□□□□□ -2.22
SUDS3Q9H7L9 MIR4790-201ENST00000577799 79 ntBASIC1.19□□□□□ -2.22
SUDS3Q9H7L9 MIR4742-201ENST00000581069 85 ntBASIC1.19□□□□□ -2.22
SUDS3Q9H7L9 Y_RNA.6-201ENST00000362350 114 ntBASIC1.18□□□□□ -2.22
SUDS3Q9H7L9 Y_RNA.48-201ENST00000362710 103 ntBASIC1.18□□□□□ -2.22
SUDS3Q9H7L9 Y_RNA.179-201ENST00000363844 90 ntBASIC1.18□□□□□ -2.22
SUDS3Q9H7L9 SNORA25.9-201ENST00000365087 128 ntBASIC1.18□□□□□ -2.22
SUDS3Q9H7L9 RNU6-842P-201ENST00000384269 107 ntBASIC1.18□□□□□ -2.22
SUDS3Q9H7L9 MIR194-1-201ENST00000384892 85 ntBASIC1.18□□□□□ -2.22
SUDS3Q9H7L9 MIR10B-201ENST00000385011 110 ntBASIC1.18□□□□□ -2.22
SUDS3Q9H7L9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SUDS3Q9H7L9 AL356776.1-201ENST00000406574 447 ntBASIC1.18□□□□□ -2.22
SUDS3Q9H7L9 AL139396.1-201ENST00000421137 167 ntBASIC1.18□□□□□ -2.22
SUDS3Q9H7L9 MTND1P34-201ENST00000438556 671 ntBASIC1.18□□□□□ -2.22
SUDS3Q9H7L9 RNU1-142P-201ENST00000516682 145 ntBASIC1.18□□□□□ -2.22
SUDS3Q9H7L9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.18□□□□□ -2.22
SUDS3Q9H7L9 AC018638.8-201ENST00000588755 281 ntBASIC1.18□□□□□ -2.22
SUDS3Q9H7L9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.18□□□□□ -2.22
SUDS3Q9H7L9 U6.108-201ENST00000637764 58 ntBASIC1.18□□□□□ -2.22
SUDS3Q9H7L9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SUDS3Q9H7L9 RNA5SP327-201ENST00000362494 101 ntBASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 Y_RNA.490-201ENST00000384413 102 ntBASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 RPL21P1-201ENST00000399532 476 ntBASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 USMG5P1-201ENST00000425964 177 ntBASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 SNORD5.1-201ENST00000458800 75 ntBASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 RNU7-34P-201ENST00000459394 64 ntBASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 AC011352.1-201ENST00000512300 793 ntBASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 Y_RNA.682-201ENST00000516457 100 ntBASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 MIR5695-201ENST00000579717 85 ntBASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 MIR4295-201ENST00000585286 85 ntBASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 MZT1P2-201ENST00000604387 248 ntBASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 AL359075.3-201ENST00000613288 217 ntBASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 AC002553.4-201ENST00000616896 331 ntBASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 AC012676.2-201ENST00000619258 186 ntBASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 AC073869.6-201ENST00000640656 341 ntBASIC1.17□□□□□ -2.22
SUDS3Q9H7L9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.16□□□□□ -2.22
SUDS3Q9H7L9 Y_RNA.86-201ENST00000363020 111 ntBASIC1.16□□□□□ -2.22
SUDS3Q9H7L9 Y_RNA.226-201ENST00000364337 114 ntBASIC1.16□□□□□ -2.22
SUDS3Q9H7L9 RNU6-1187P-201ENST00000364771 110 ntBASIC1.16□□□□□ -2.22
SUDS3Q9H7L9 MIR1277-201ENST00000408536 78 ntBASIC1.16□□□□□ -2.22
SUDS3Q9H7L9 MTND3P23-201ENST00000431980 347 ntBASIC1.16□□□□□ -2.22
SUDS3Q9H7L9 AL606517.2-201ENST00000442855 241 ntBASIC1.16□□□□□ -2.22
SUDS3Q9H7L9 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.16□□□□□ -2.22
SUDS3Q9H7L9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.16□□□□□ -2.22
SUDS3Q9H7L9 RNU6-329P-201ENST00000459618 107 ntBASIC1.16□□□□□ -2.22
SUDS3Q9H7L9 MTND5P5-201ENST00000503764 376 ntBASIC1.16□□□□□ -2.22
SUDS3Q9H7L9 AC093303.1-201ENST00000514549 295 ntBASIC1.16□□□□□ -2.22
SUDS3Q9H7L9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.16□□□□□ -2.22
SUDS3Q9H7L9 CBX3P8-201ENST00000532412 525 ntBASIC1.16□□□□□ -2.22
SUDS3Q9H7L9 FRG2DP-202ENST00000566967 323 ntBASIC1.16□□□□□ -2.22
SUDS3Q9H7L9 AC010999.1-201ENST00000611856 324 ntBASIC1.16□□□□□ -2.22
SUDS3Q9H7L9 RNU6-1266P-201ENST00000362794 105 ntBASIC1.15□□□□□ -2.23
SUDS3Q9H7L9 RNU6-510P-201ENST00000391239 108 ntBASIC1.15□□□□□ -2.23
SUDS3Q9H7L9 MIR1287-201ENST00000408492 90 ntBASIC1.15□□□□□ -2.23
SUDS3Q9H7L9 RNU6-1186P-201ENST00000410429 97 ntBASIC1.15□□□□□ -2.23
SUDS3Q9H7L9 AC010154.1-201ENST00000425857 269 ntBASIC1.15□□□□□ -2.23
SUDS3Q9H7L9 AC005002.2-201ENST00000438228 269 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms