Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC105137.2-201ENST00000569073 466 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 AC005176.2-201ENST00000596933 147 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 AC008739.2-201ENST00000597006 317 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 AC037487.3-201ENST00000606668 112 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 AC004832.4-201ENST00000608952 331 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 uc_338.14-201ENST00000613162 166 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.51□□□□□ -2.01
EBF3Q9H4W6 BX322639.1-202ENST00000423987 2213 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
EBF3Q9H4W6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
EBF3Q9H4W6 AL109809.4-201ENST00000603520 2185 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
EBF3Q9H4W6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.51□□□□□ -2.01
EBF3Q9H4W6 RNA5SP456-201ENST00000364002 114 ntBASIC2.5□□□□□ -2.01
EBF3Q9H4W6 RNU6-514P-201ENST00000384208 107 ntBASIC2.5□□□□□ -2.01
EBF3Q9H4W6 RN7SKP223-201ENST00000410582 62 ntBASIC2.5□□□□□ -2.01
EBF3Q9H4W6 RPS26P42-201ENST00000413485 326 ntBASIC2.5□□□□□ -2.01
EBF3Q9H4W6 AL135786.1-201ENST00000415892 214 ntBASIC2.5□□□□□ -2.01
EBF3Q9H4W6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.5□□□□□ -2.01
EBF3Q9H4W6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.5□□□□□ -2.01
EBF3Q9H4W6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.5□□□□□ -2.01
EBF3Q9H4W6 AC074133.1-201ENST00000515696 183 ntBASIC2.5□□□□□ -2.01
EBF3Q9H4W6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.5□□□□□ -2.01
EBF3Q9H4W6 AC233702.2-202ENST00000562547 291 ntBASIC2.5□□□□□ -2.01
EBF3Q9H4W6 MIR4446-201ENST00000578505 67 ntBASIC2.5□□□□□ -2.01
EBF3Q9H4W6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.5□□□□□ -2.01
EBF3Q9H4W6 MIR3136-201ENST00000583498 78 ntBASIC2.5□□□□□ -2.01
EBF3Q9H4W6 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.5□□□□□ -2.01
EBF3Q9H4W6 AC073349.3-201ENST00000617616 186 ntBASIC2.5□□□□□ -2.01
EBF3Q9H4W6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.5□□□□□ -2.01
EBF3Q9H4W6 AC006001.4-201ENST00000622243 395 ntBASIC2.5□□□□□ -2.01
EBF3Q9H4W6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
EBF3Q9H4W6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
EBF3Q9H4W6 AC080100.1-201ENST00000624239 5356 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 SNORD114-19-201ENST00000363072 75 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 RNU6-653P-201ENST00000363074 106 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 RNU4-80P-201ENST00000363200 141 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 RNU6-1180P-201ENST00000364935 107 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 Y_RNA.435-201ENST00000384095 112 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 SNORA80E-201ENST00000384744 137 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 MIR613-201ENST00000385248 95 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 Y_RNA.597-201ENST00000410463 100 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 AC007064.1-201ENST00000412238 351 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 ELOCP21-201ENST00000412558 336 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 AL513477.1-202ENST00000417061 214 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 RPS12P2-201ENST00000439728 269 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.49□□□□□ -2.01
EBF3Q9H4W6 AIG1P1-201ENST00000503376 148 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 RNU6-191P-201ENST00000516295 94 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 RNA5SP281-201ENST00000516504 135 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 RPPH1-2P-201ENST00000516688 293 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.49□□□□□ -2.01
EBF3Q9H4W6 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.49□□□□□ -2.01
EBF3Q9H4W6 AC010999.1-201ENST00000611856 324 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 snoU18.1-201ENST00000629629 71 ntBASIC2.49□□□□□ -2.01
EBF3Q9H4W6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
EBF3Q9H4W6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.48□□□□□ -2.01
EBF3Q9H4W6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.48□□□□□ -2.01
EBF3Q9H4W6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
EBF3Q9H4W6 ZNF204P-201ENST00000416749 2397 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 RNU6-1130P-201ENST00000365434 107 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 RNU1-138P-201ENST00000384093 164 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 SNORA46.1-201ENST00000391069 153 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 AL390729.2-201ENST00000416137 156 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.48□□□□□ -2.01
EBF3Q9H4W6 AC012306.1-201ENST00000423267 114 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 AC009414.1-201ENST00000427200 443 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.48□□□□□ -2.01
EBF3Q9H4W6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.48□□□□□ -2.01
EBF3Q9H4W6 snoU13.15-201ENST00000459407 104 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 AC091179.3-201ENST00000474761 144 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.48□□□□□ -2.01
EBF3Q9H4W6 HMGB3P3-201ENST00000510526 400 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 AC026436.1-201ENST00000510537 270 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 RNU6-1198P-201ENST00000516904 67 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 AC079598.5-201ENST00000547460 117 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 AC018448.1-201ENST00000552843 316 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 MIR4648-201ENST00000580107 72 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 MIR5092-201ENST00000583139 88 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 AL138963.2-201ENST00000605137 226 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 AC103810.6-201ENST00000606708 136 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 AL008718.3-201ENST00000610217 321 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 AC004467.1-201ENST00000615678 330 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 MIR7843-201ENST00000622274 79 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 AC069528.2-201ENST00000624849 1991 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
EBF3Q9H4W6 MTND5P35-201ENST00000557537 1720 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 AC068700.1-201ENST00000565862 3754 ntBASIC2.48□□□□□ -2.01
EBF3Q9H4W6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
EBF3Q9H4W6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.47□□□□□ -2.01
EBF3Q9H4W6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.47□□□□□ -2.01
EBF3Q9H4W6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.47□□□□□ -2.01
EBF3Q9H4W6 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
EBF3Q9H4W6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
EBF3Q9H4W6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
EBF3Q9H4W6 RNU6-529P-201ENST00000363383 104 ntBASIC2.47□□□□□ -2.01
EBF3Q9H4W6 Y_RNA.304-201ENST00000365011 112 ntBASIC2.47□□□□□ -2.01
EBF3Q9H4W6 RNU6-81P-201ENST00000365608 104 ntBASIC2.47□□□□□ -2.01
EBF3Q9H4W6 RNU6-211P-201ENST00000384047 107 ntBASIC2.47□□□□□ -2.01
EBF3Q9H4W6 Y_RNA.441-201ENST00000384123 112 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms