Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 RPL36AP21-201ENST00000490372 323 ntBASIC1.6□□□□□ -2.15
UBQLN3Q9H347 AC091951.2-201ENST00000500762 203 ntBASIC1.6□□□□□ -2.15
UBQLN3Q9H347 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.6□□□□□ -2.15
UBQLN3Q9H347 AC025465.3-201ENST00000510570 311 ntBASIC1.6□□□□□ -2.15
UBQLN3Q9H347 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.6□□□□□ -2.15
UBQLN3Q9H347 CBX3P4-201ENST00000538909 354 ntBASIC1.6□□□□□ -2.15
UBQLN3Q9H347 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.6□□□□□ -2.15
UBQLN3Q9H347 MIR4285-201ENST00000581001 85 ntBASIC1.6□□□□□ -2.15
UBQLN3Q9H347 MIR548S-201ENST00000581352 82 ntBASIC1.6□□□□□ -2.15
UBQLN3Q9H347 AC016925.2-201ENST00000605108 242 ntBASIC1.6□□□□□ -2.15
UBQLN3Q9H347 MIR1302-1-201ENST00000637932 143 ntBASIC1.6□□□□□ -2.15
UBQLN3Q9H347 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
UBQLN3Q9H347 MIR126-201ENST00000362291 85 ntBASIC1.59□□□□□ -2.15
UBQLN3Q9H347 RNU6-414P-201ENST00000363705 104 ntBASIC1.59□□□□□ -2.15
UBQLN3Q9H347 Y_RNA.259-201ENST00000364619 101 ntBASIC1.59□□□□□ -2.15
UBQLN3Q9H347 Y_RNA.387-201ENST00000383918 102 ntBASIC1.59□□□□□ -2.15
UBQLN3Q9H347 RNU6-482P-201ENST00000391068 107 ntBASIC1.59□□□□□ -2.15
UBQLN3Q9H347 AL627390.1-201ENST00000396055 340 ntBASIC1.59□□□□□ -2.15
UBQLN3Q9H347 AC069257.2-201ENST00000441819 155 ntBASIC1.59□□□□□ -2.15
UBQLN3Q9H347 AC093019.1-201ENST00000443135 252 ntBASIC1.59□□□□□ -2.15
UBQLN3Q9H347 MTCO3P10-201ENST00000455912 772 ntBASIC1.59□□□□□ -2.15
UBQLN3Q9H347 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.59□□□□□ -2.15
UBQLN3Q9H347 RNA5SP437-201ENST00000517249 129 ntBASIC1.59□□□□□ -2.15
UBQLN3Q9H347 AC027419.1-201ENST00000522976 328 ntBASIC1.59□□□□□ -2.15
UBQLN3Q9H347 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.59□□□□□ -2.15
UBQLN3Q9H347 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.59□□□□□ -2.15
UBQLN3Q9H347 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
UBQLN3Q9H347 SNORA72.2-201ENST00000365028 127 ntBASIC1.58□□□□□ -2.16
UBQLN3Q9H347 MIR625-201ENST00000385047 85 ntBASIC1.58□□□□□ -2.16
UBQLN3Q9H347 RNU6-1156P-201ENST00000410365 100 ntBASIC1.58□□□□□ -2.16
UBQLN3Q9H347 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.58□□□□□ -2.16
UBQLN3Q9H347 CYCSP23-201ENST00000519781 313 ntBASIC1.58□□□□□ -2.16
UBQLN3Q9H347 AL357075.2-201ENST00000614906 189 ntBASIC1.58□□□□□ -2.16
UBQLN3Q9H347 AC133104.2-201ENST00000615272 193 ntBASIC1.58□□□□□ -2.16
UBQLN3Q9H347 AC104260.1-201ENST00000616660 539 ntBASIC1.58□□□□□ -2.16
UBQLN3Q9H347 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
UBQLN3Q9H347 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.57□□□□□ -2.16
UBQLN3Q9H347 Y_RNA.356-201ENST00000365475 113 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 RNU6-1145P-201ENST00000384246 107 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 Y_RNA.498-201ENST00000384460 102 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 Y_RNA.577-201ENST00000384794 101 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 MIR515-2-201ENST00000384883 83 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 MIR515-1-201ENST00000384884 83 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 RNU6-1009P-201ENST00000390996 107 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 MTCYBP4-201ENST00000401524 249 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 RNU6-1186P-201ENST00000410429 97 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 RPS20P15-201ENST00000412792 311 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 AC073910.1-201ENST00000445047 438 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 AC105758.1-201ENST00000506038 399 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 RNU6-470P-201ENST00000515954 104 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 RNU6-507P-201ENST00000516045 100 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 RNU6-277P-201ENST00000516272 106 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 RNU6-875P-201ENST00000516488 106 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 RNU1-142P-201ENST00000516682 145 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.57□□□□□ -2.16
UBQLN3Q9H347 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.57□□□□□ -2.16
UBQLN3Q9H347 AL132765.2-201ENST00000610812 351 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 AC025253.1-201ENST00000613623 543 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 AL353997.5-201ENST00000618886 171 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.57□□□□□ -2.16
UBQLN3Q9H347 ZNF72P-201ENST00000425869 1908 ntBASIC1.56□□□□□ -2.16
UBQLN3Q9H347 RNU1-17P-201ENST00000363022 152 ntBASIC1.56□□□□□ -2.16
UBQLN3Q9H347 SNORA63D-201ENST00000364359 132 ntBASIC1.56□□□□□ -2.16
UBQLN3Q9H347 RNU4-42P-201ENST00000364738 142 ntBASIC1.56□□□□□ -2.16
UBQLN3Q9H347 SNORA69.1-201ENST00000390904 137 ntBASIC1.56□□□□□ -2.16
UBQLN3Q9H347 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.56□□□□□ -2.16
UBQLN3Q9H347 TOMM22P2-201ENST00000430735 237 ntBASIC1.56□□□□□ -2.16
UBQLN3Q9H347 PCNPP5-201ENST00000452246 481 ntBASIC1.56□□□□□ -2.16
UBQLN3Q9H347 snoU13.9-201ENST00000458927 103 ntBASIC1.56□□□□□ -2.16
UBQLN3Q9H347 RNU7-169P-201ENST00000459456 61 ntBASIC1.56□□□□□ -2.16
UBQLN3Q9H347 SNORA25.15-201ENST00000516487 89 ntBASIC1.56□□□□□ -2.16
UBQLN3Q9H347 RNA5SP481-201ENST00000516814 122 ntBASIC1.56□□□□□ -2.16
UBQLN3Q9H347 AL137100.2-201ENST00000555786 315 ntBASIC1.56□□□□□ -2.16
UBQLN3Q9H347 SUB1P3-201ENST00000564581 315 ntBASIC1.56□□□□□ -2.16
UBQLN3Q9H347 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.56□□□□□ -2.16
UBQLN3Q9H347 MIR8081-201ENST00000611533 95 ntBASIC1.56□□□□□ -2.16
UBQLN3Q9H347 AL359075.3-201ENST00000613288 217 ntBASIC1.56□□□□□ -2.16
UBQLN3Q9H347 AC084781.2-201ENST00000615568 161 ntBASIC1.56□□□□□ -2.16
UBQLN3Q9H347 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.56□□□□□ -2.16
UBQLN3Q9H347 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.56□□□□□ -2.16
UBQLN3Q9H347 WWP1P1-201ENST00000466609 2769 ntBASIC1.56□□□□□ -2.16
UBQLN3Q9H347 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
UBQLN3Q9H347 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
UBQLN3Q9H347 RNA5SP99-201ENST00000364020 114 ntBASIC1.55□□□□□ -2.16
UBQLN3Q9H347 RNA5SP190-201ENST00000365222 118 ntBASIC1.55□□□□□ -2.16
UBQLN3Q9H347 RNU6-338P-201ENST00000383888 105 ntBASIC1.55□□□□□ -2.16
UBQLN3Q9H347 RNU6-318P-201ENST00000384283 103 ntBASIC1.55□□□□□ -2.16
UBQLN3Q9H347 RNU6-360P-201ENST00000390944 104 ntBASIC1.55□□□□□ -2.16
UBQLN3Q9H347 MIR1267-201ENST00000408723 78 ntBASIC1.55□□□□□ -2.16
UBQLN3Q9H347 MTND5P20-201ENST00000448677 143 ntBASIC1.55□□□□□ -2.16
UBQLN3Q9H347 AL163195.1-201ENST00000496941 348 ntBASIC1.55□□□□□ -2.16
UBQLN3Q9H347 AL117351.2-201ENST00000513571 157 ntBASIC1.55□□□□□ -2.16
UBQLN3Q9H347 RN7SKP49-201ENST00000516675 260 ntBASIC1.55□□□□□ -2.16
UBQLN3Q9H347 Y_RNA.702-201ENST00000516843 96 ntBASIC1.55□□□□□ -2.16
UBQLN3Q9H347 AC018448.1-201ENST00000552843 316 ntBASIC1.55□□□□□ -2.16
UBQLN3Q9H347 AL355375.2-201ENST00000574825 175 ntBASIC1.55□□□□□ -2.16
UBQLN3Q9H347 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
UBQLN3Q9H347 AC073544.1-201ENST00000600110 1595 ntBASIC1.55□□□□□ -2.16
UBQLN3Q9H347 AC100821.1-201ENST00000523153 2479 ntBASIC1.54□□□□□ -2.16
UBQLN3Q9H347 Y_RNA.314-201ENST00000365114 102 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms