Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.94□□□□□ -2.1
ZNF541Q9H0D2 AL161670.1-201ENST00000554348 137 ntBASIC1.94□□□□□ -2.1
ZNF541Q9H0D2 MIR5701-3-201ENST00000578890 82 ntBASIC1.94□□□□□ -2.1
ZNF541Q9H0D2 MIR5701-1-201ENST00000585138 82 ntBASIC1.94□□□□□ -2.1
ZNF541Q9H0D2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.94□□□□□ -2.1
ZNF541Q9H0D2 AL157834.3-201ENST00000615543 103 ntBASIC1.94□□□□□ -2.1
ZNF541Q9H0D2 MIR5701-2-201ENST00000615634 82 ntBASIC1.94□□□□□ -2.1
ZNF541Q9H0D2 MIR6779-201ENST00000617283 64 ntBASIC1.94□□□□□ -2.1
ZNF541Q9H0D2 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.94□□□□□ -2.1
ZNF541Q9H0D2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
ZNF541Q9H0D2 RNA5SP325-201ENST00000363756 130 ntBASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 SNORD87-201ENST00000364849 89 ntBASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 Y_RNA.314-201ENST00000365114 102 ntBASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 Y_RNA.557-201ENST00000384680 107 ntBASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 MIR10B-201ENST00000385011 110 ntBASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 MIR586-201ENST00000385035 97 ntBASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 MIR1253-201ENST00000408273 105 ntBASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 AC004866.1-201ENST00000411748 78 ntBASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 RNU1-131P-201ENST00000458943 161 ntBASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 Y_RNA.718-201ENST00000517110 102 ntBASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 AC144568.1-201ENST00000520139 137 ntBASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 MIR4795-201ENST00000584182 89 ntBASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 AC126177.8-201ENST00000618339 1015 ntBASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 MIR6734-201ENST00000621166 68 ntBASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 AL359851.1-201ENST00000569460 4997 ntBASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
ZNF541Q9H0D2 Y_RNA.146-201ENST00000363549 102 ntBASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 SNORA16B-201ENST00000364674 135 ntBASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 RNU6-975P-201ENST00000384296 105 ntBASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 SNORA69.1-201ENST00000390904 137 ntBASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 SNORA67.6-201ENST00000391093 99 ntBASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 RNU6-57P-201ENST00000411348 103 ntBASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 AC022028.1-201ENST00000412054 408 ntBASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 AL356379.1-201ENST00000414105 126 ntBASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 AC096920.1-201ENST00000423991 241 ntBASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 AL357134.1-201ENST00000445848 426 ntBASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 RNU7-169P-201ENST00000459456 61 ntBASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 AC010531.2-201ENST00000465012 153 ntBASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 RNU6-1041P-201ENST00000516254 102 ntBASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 C8orf59P2-201ENST00000603441 271 ntBASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 MZT1P2-201ENST00000604387 248 ntBASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 AC068205.3-201ENST00000636385 468 ntBASIC1.92□□□□□ -2.1
ZNF541Q9H0D2 RNU6-281P-201ENST00000384212 103 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 Y_RNA.577-201ENST00000384794 101 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 RNY4P36-201ENST00000391116 96 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 AL512604.1-201ENST00000404812 257 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 MIR1283-2-201ENST00000408621 87 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 HMGN2P19-201ENST00000425149 265 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 MTCO1P44-201ENST00000441935 243 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 HMGN2P9-201ENST00000476875 229 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 AC067942.3-201ENST00000512025 362 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 Y_RNA.683-201ENST00000516508 93 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 RNU2-34P-201ENST00000516534 121 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 RNU7-4P-201ENST00000516961 62 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 RNU1-92P-201ENST00000517017 135 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 AC006001.4-201ENST00000622243 395 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 MTND5P10-201ENST00000603719 1809 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 RNU4-79P-201ENST00000362764 141 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 SNORD48-201ENST00000364953 64 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 Y_RNA.415-201ENST00000384012 112 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 Y_RNA.509-201ENST00000384506 99 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 RNA5SP501-201ENST00000410990 112 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 RN7SKP101-201ENST00000411376 320 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 AF228730.4-201ENST00000421457 183 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 RPS4XP11-201ENST00000446897 772 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 ATP5J2P3-201ENST00000451550 258 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 AC091179.3-201ENST00000474761 144 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 MIR3169-201ENST00000578032 83 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 AC005786.1-201ENST00000588553 154 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 AC005034.5-201ENST00000604219 466 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 AC104985.2-201ENST00000620598 500 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 uc_338.20-201ENST00000621563 178 ntBASIC1.91□□□□□ -2.1
ZNF541Q9H0D2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
ZNF541Q9H0D2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
ZNF541Q9H0D2 RNU6-490P-201ENST00000362985 107 ntBASIC1.9□□□□□ -2.11
ZNF541Q9H0D2 RNA5SP212-201ENST00000391223 107 ntBASIC1.9□□□□□ -2.11
ZNF541Q9H0D2 RNU1-139P-201ENST00000391307 165 ntBASIC1.9□□□□□ -2.11
ZNF541Q9H0D2 UQCRBP2-201ENST00000447827 297 ntBASIC1.9□□□□□ -2.11
ZNF541Q9H0D2 ELOCP24-201ENST00000456370 334 ntBASIC1.9□□□□□ -2.11
ZNF541Q9H0D2 SNORD19B-201ENST00000459623 84 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms